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Add BLOBTOOLKIT validate.py #81

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DLBPointon opened this issue Feb 10, 2025 · 1 comment
Open

Add BLOBTOOLKIT validate.py #81

DLBPointon opened this issue Feb 10, 2025 · 1 comment
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enhancement New feature or request

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Description of feature

Blobtoolkit python package comes with a validation script which we should use in order to ensure that the datasets are in fact correct and OK for ingestion to the server. This may also pick up errors with the data that we can skip during the pipeline.
@DLBPointon DLBPointon added the enhancement New feature or request label Feb 10, 2025
@DLBPointon DLBPointon self-assigned this Feb 10, 2025
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This will require a new container: https://blobtoolkit.genomehubs.org/specification/specification-tutorials/validating-datasets/

@DLBPointon DLBPointon mentioned this issue Feb 12, 2025
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