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CMakeLists.txt
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cmake_minimum_required(VERSION 3.17)
project(PretextView VERSION "1.0.1")
option(FORCE_MAC_X86 "Force macOS x86_64 build" OFF)
option(BUILD_UNIVERSAL "Build macOS universal binary" OFF)
option(WITH_TORCH "Find and link torch lib" OFF)
set(CMAKE_C_STANDARD 17)
set(CMAKE_CXX_STANDARD 17)
set(CMAKE_C_STANDARD_REQUIRED ON)
set(CMAKE_CXX_STANDARD_REQUIRED ON)
set(target_name PretextViewAI)
if (APPLE)
if(FORCE_MAC_X86)
message(STATUS "Forcing x86_64 architecture build")
set(CMAKE_OSX_ARCHITECTURES "x86_64" CACHE STRING "Build architectures" FORCE)
elseif(BUILD_UNIVERSAL)
message(STATUS "Building macOS universal binary (x86_64 + arm64)")
set(CMAKE_OSX_ARCHITECTURES "x86_64;arm64" CACHE STRING "Build architectures" FORCE)
else()
if(CMAKE_SYSTEM_PROCESSOR STREQUAL "arm64")
set(CMAKE_OSX_ARCHITECTURES "arm64")
message(STATUS "Auto-detected architecture: arm64")
else()
set(CMAKE_OSX_ARCHITECTURES "x86_64")
message(STATUS "Auto-detected architecture: x86_64")
endif()
endif()
message(STATUS "MacOS deployment target: ${CMAKE_OSX_DEPLOYMENT_TARGET}")
message(STATUS "MacOS target architectures: ${CMAKE_OSX_ARCHITECTURES}")
set(ARCH_TYPE ${CMAKE_OSX_ARCHITECTURES})
else()
if(CMAKE_SYSTEM_PROCESSOR MATCHES "AMD64|x86_64")
set(ARCH_TYPE "x86_64")
elseif(CMAKE_SYSTEM_PROCESSOR MATCHES "arm64|aarch64")
set(ARCH_TYPE "ARM64")
elseif(CMAKE_SYSTEM_PROCESSOR MATCHES "i[3-6]86")
set(ARCH_TYPE "x86")
else()
message(FATAL_ERROR "Unsupported architecture")
endif()
if(WIN32)
message(STATUS "Windows build")
elseif(UNIX AND NOT APPLE)
message(STATUS "Linux build")
else()
message(FATAL_ERROR "Unsupported platform")
endif()
endif()
message(STATUS "Install path: ${CMAKE_INSTALL_PREFIX}")
if (CMAKE_BUILD_TYPE STREQUAL "Debug")
message(STATUS "Debug version")
set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} -g -O0")
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -g -O0")
else()
message(STATUS "Release version")
set(CMAKE_C_FLAGS_RELEASE "${CMAKE_C_FLAGS_RELEASE} -O3")
set(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} -O3")
endif()
include_directories(
include
src
subprojects/imgui
subprojects/glfw/include
subprojects/libdeflate
subprojects/glm
)
add_subdirectory(subprojects/glfw)
add_subdirectory(subprojects/glm)
find_library(
lib_deflate_static
NAMES deflate deflatestatic
PATHS
subprojects/libdeflate/build
subprojects/libdeflate/build/debug
subprojects/libdeflate/build/Release
subprojects/libdeflate/build/release)
if(NOT lib_deflate_static)
message(FATAL_ERROR "lib_deflate_static not found")
else()
message(STATUS "lib_deflate_static found: ${lib_deflate_static}")
endif()
# set(CMAKE_PREFIX_PATH "subprojects/libtorch/share/cmake/Torch")
if (WITH_TORCH)
message(STATUS "CMAKE_PREFIX_PATH: ${CMAKE_PREFIX_PATH}")
find_package(Torch REQUIRED)
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${TORCH_CXX_FLAGS}")
message(STATUS "Torch libs: ${TORCH_LIBRARIES}")
message(STATUS "Torch install prefix: ${TORCH_INSTALL_PREFIX}")
# set(CMAKE_PREFIX_PATH "../libtorch/share/cmake/Torch")
set(WITH_PYTHON OFF CACHE BOOL "Disable Python integration for pytorch_scatter" FORCE)
add_subdirectory(subprojects/pytorch_scatter)
add_library(sortlib STATIC src/aisort.cpp )
target_link_libraries(
sortlib PUBLIC
${TORCH_LIBRARIES}
${torchscatter})
else()
message(STATUS "Libtorch: Build without libtorch")
add_library(sortlib STATIC src/frag_sort.cpp )
endif()
add_library(glad STATIC glad.c)
add_library(utilsPretextView STATIC src/utilsPretextView.cpp)
add_library(copy_texture STATIC src/copy_texture.cpp)
# target_link_libraries(copy_texture PRIVATE Eigen3::Eigen)
add_library(imgui STATIC
subprojects/imgui/imgui_demo.cpp
subprojects/imgui/imgui_draw.cpp
subprojects/imgui/imgui_tables.cpp
subprojects/imgui/imgui_widgets.cpp
subprojects/imgui/imgui.cpp
subprojects/imgui/backends/imgui_impl_glfw.cpp
subprojects/imgui/backends/imgui_impl_opengl3.cpp
)
if(NOT APPLE)
add_executable( ${target_name} PretextView.cpp )
else()
add_executable( ${target_name} MACOSX_BUNDLE PretextView.cpp )
set_target_properties(
${target_name} PROPERTIES
MACOSX_BUNDLE_INFO_PLIST "${CMAKE_SOURCE_DIR}/Info.plist"
)
endif()
target_compile_definitions(${target_name} PRIVATE PV=${PROJECT_VERSION})
if (CMAKE_BUILD_TYPE STREQUAL "Debug")
target_compile_definitions(${target_name} PRIVATE DEBUG)
target_compile_definitions(copy_texture PRIVATE DEBUG)
message(STATUS "Debug version: flag (${CMAKE_BUILD_TYPE}) with DEBUG")
else()
message(STATUS "Release version: flag (${CMAKE_BUILD_TYPE}) without DEBUG")
endif()
target_link_libraries(
${target_name} PRIVATE
${lib_deflate_static}
sortlib
glm
glad
utilsPretextView
copy_texture
imgui
glfw
)
if (APPLE)
set(library_need Cocoa OpenGL IOKit CoreVideo)
find_library(METAL_LIB Metal)
find_library(ACCELERATE_LIB Accelerate)
if (METAL_LIB)
list(APPEND library_need Metal)
endif()
if (ACCELERATE_LIB)
list(APPEND library_need Accelerate)
endif()
elseif(WIN32)
set(library_need gdi32 opengl32 kernel32 user32 shell32 Ole32)
elseif(UNIX AND NOT APPLE)
set(library_need m dl X11)
else()
message(FATAL_ERROR "Unsupported platform")
endif()
foreach (library ${library_need})
if ( NOT WIN32)
find_library(${library}_LIB ${library})
if (NOT ${library}_LIB)
message(FATAL_ERROR "${library} not found")
else()
message(STATUS "${library} found: ${${library}_LIB}")
endif()
target_link_libraries(${target_name} PRIVATE ${${library}_LIB} )
else() # WIN32
foreach (library ${library_need})
target_link_libraries(${target_name} PRIVATE ${library} )
endforeach()
endif()
endforeach()
# ============ CMAKE INSTALLATION ==============
file(GLOB aimodel_files "${CMAKE_CURRENT_SOURCE_DIR}/ai_model/*")
file(GLOB torch_copy_libs "${TORCH_INSTALL_PREFIX}/lib/*")
if (APPLE)
execute_process(
COMMAND bash ${CMAKE_SOURCE_DIR}/make_macos_app_plist.sh ${PROJECT_VERSION}
WORKING_DIRECTORY ${CMAKE_SOURCE_DIR}
RESULT_VARIABLE result
OUTPUT_VARIABLE output
ERROR_VARIABLE error_output
TIMEOUT 30
)
endif()
if (CMAKE_BUILD_TYPE STREQUAL "Debug")
message(STATUS "Debug on ${CMAKE_SYSTEM_NAME} - ${ARCH_TYPE}.")
if (APPLE)
file(COPY "${CMAKE_CURRENT_SOURCE_DIR}/Info.plist" DESTINATION "${target_name}.app/Contents")
file(COPY "${CMAKE_CURRENT_SOURCE_DIR}/icon.icns" DESTINATION "${target_name}.app/Contents/Resources" )
if (WITH_TORCH)
file(COPY ${aimodel_files} DESTINATION "${target_name}.app/Contents/Resources/ai_model")
endif()
endif()
endif()
if(APPLE)
# set the shared/dynamic library path for the installed binary
message(STATUS "[Cmake Install]: Mac")
set_target_properties(
${target_name}
PROPERTIES
INSTALL_RPATH "@executable_path/../Frameworks")
install(TARGETS ${target_name}
BUNDLE DESTINATION .
COMPONENT Runtime) # generate the ${target_name}.app package under ${cmake_install_prefix}
install(FILES "${CMAKE_CURRENT_SOURCE_DIR}/Info.plist"
DESTINATION "${target_name}.app/Contents")
install(FILES "${CMAKE_CURRENT_SOURCE_DIR}/icon.icns"
DESTINATION "${target_name}.app/Contents/Resources" )
if (WITH_TORCH)
install(FILES ${torch_copy_libs}
DESTINATION "${target_name}.app/Contents/Frameworks" )
install(FILES ${aimodel_files}
DESTINATION "${target_name}.app/Contents/Resources/ai_model" )
endif()
elseif(${CMAKE_SYSTEM_NAME} STREQUAL "Linux")
message(STATUS "[Cmake Install]: Linux")
set_target_properties(
${target_name}
PROPERTIES
INSTALL_RPATH "$ORIGIN/../lib")
install(
TARGETS ${target_name}
RUNTIME DESTINATION "bin"
COMPONENT Runtime)
if (WITH_TORCH)
install(
FILES ${torch_copy_libs}
DESTINATION "lib")
install(
FILES ${aimodel_files}
DESTINATION "ai_model")
endif()
else () # windows
message(STATUS "[Cmake Install]: Windows")
target_sources(${target_name} PRIVATE "${CMAKE_SOURCE_DIR}/PretextView.rc") # add logo to win version
install(
TARGETS ${target_name}
RUNTIME DESTINATION .
COMPONENT Runtime)
if (WITH_TORCH)
install(
FILES ${torch_copy_libs}
DESTINATION .) # libtorch
install(
FILES ${aimodel_files}
DESTINATION "ai_model")
endif()
endif()
# ==== CPack: installation package ====
include(InstallRequiredSystemLibraries)
set(CPACK_PACKAGE_NAME ${target_name})
set(CPACK_PACKAGE_VERSION ${PROJECT_VERSION})
set(CPACK_PACKAGE_DIRECTORY ${CMAKE_BINARY_DIR})
set(CPACK_PACKAGE_HOMEPAGE_URL "https://github.com/guanshaoheng/PretextView")
set(CPACK_PACKAGE_FILE_NAME "${CPACK_PACKAGE_NAME}-${CPACK_PACKAGE_VERSION}-${CMAKE_SYSTEM_NAME}-${ARCH_TYPE}")
set(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/LICENCE.txt")
if(${CMAKE_SYSTEM_NAME} STREQUAL "Darwin") # macOS
message(STATUS "[CPack]: Generate on Mac")
set(CPACK_GENERATOR "DragNDrop")
set(CPACK_DMG_VOLUME_NAME "${target_name} Installer")
set(CPACK_DMG_FORMAT "UDZO")
elseif(${CMAKE_SYSTEM_NAME} STREQUAL "Linux") # Linux (Ubuntu)
message(STATUS "[CPack]: Generate on Linux")
install(
FILES "${CMAKE_SOURCE_DIR}/ico_design/icon_48x48x32.png"
DESTINATION "/usr/share/icons/hicolor/48x48/apps"
RENAME "pretextview.png"
)
install(
FILES "${CMAKE_SOURCE_DIR}/ico_design/icon_64x64x32.png"
DESTINATION "share/icons/hicolor/64x64/apps"
RENAME "pretextview.png"
)
install(
FILES "${CMAKE_SOURCE_DIR}/ico_design/icon_128x128x32.png"
DESTINATION "/usr/share/icons/hicolor/128x128/apps"
RENAME "pretextview.png"
)
install(
FILES "${CMAKE_SOURCE_DIR}/ico_design/icon_256x256x32.png"
DESTINATION "/usr/share/icons/hicolor/256x256/apps"
RENAME "pretextview.png"
)
install(
FILES "${CMAKE_SOURCE_DIR}/ico_design/icon_512x512x32.png"
DESTINATION "/usr/share/icons/hicolor/512x512/apps"
RENAME "pretextview.png"
)
configure_file(
"${CMAKE_SOURCE_DIR}/pretextviewai.desktop.in"
"${CMAKE_BINARY_DIR}/pretextviewai.desktop"
@ONLY
)
install(
FILES "${CMAKE_BINARY_DIR}/pretextviewai.desktop"
DESTINATION "share/applications"
)
set(CPACK_GENERATOR "DEB")
set(CPACK_DEBIAN_HARDLINKS OFF)
set(CPACK_DEBIAN_PACKAGE_MAINTAINER "Shaoheng Guan")
set(CPACK_DEBIAN_PACKAGE_DESCRIPTION "This is ${target_name}, HiC map viewer, editor with AI-powered automatic curation.")
set(CPACK_DEBIAN_PACKAGE_DEPENDS "libc6 (>= 2.29)")
set(CPACK_DEBIAN_PACKAGE_SECTION "utils")
elseif(WIN32) # Windows
message(STATUS "[CPack]: Generate on Windows")
set(CPACK_GENERATOR "NSIS")
set(CPACK_NSIS_DISPLAY_NAME "${target_name}")
set(CPACK_NSIS_PACKAGE_NAME "${target_name} Installer")
set(CPACK_NSIS_MUI_ICON "${CMAKE_SOURCE_DIR}/pretextview_icon.ico")
set(CPACK_NSIS_MUI_UNIICON "${CMAKE_SOURCE_DIR}/pretextview_icon.ico")
set(CPACK_NSIS_INSTALLED_ICON_NAME "${target_name}.exe")
set(CPACK_NSIS_HELP_LINK "https://github.com/guanshaoheng/PretextView")
set(CPACK_NSIS_URL_INFO_ABOUT "https://github.com/guanshaoheng/PretextView")
endif()
include(CPack)