fix list

Author: antgonza

README.rst

@@ -9,10 +9,14 @@ This plugin provides the following commands:
 This command converts the BCL to FASTQ files, does adaptor and host/human sequence filtering, summarizes results and uploads the resulting files to Qiita as a new preparation and artifact. This command is based on [mg-scripts](https://github.com/biocore/mg-scripts) and (metapool)[https://github.com/biocore/metagenomics_pooling_notebook/].
 
 When the SPP adds a new preparation it adds some extra columns to that preparation:
-- raw_reads_r1r2: this is the total number of reads that the sequencing generated for R1 and R2.
-- total_biological_reads_r1r2: the total of reads minus the adapters but before host/human filtering for R1 and R2.
-- quality_filtered_reads_r1r2: total of reads that passed host/human filtering for R1 and R2.
-- fraction_passing_quality_filter: the fraction of reads that are in quality_filtered_reads_r1r2 from the raw_reads_r1r2.
+
+* raw_reads_r1r2: this is the total number of reads that the sequencing generated for R1 and R2.
+
+* total_biological_reads_r1r2: the total of reads minus the adapters but before host/human filtering for R1 and R2.
+
+* quality_filtered_reads_r1r2: total of reads that passed host/human filtering for R1 and R2.
+
+* fraction_passing_quality_filter: the fraction of reads that are in quality_filtered_reads_r1r2 from the raw_reads_r1r2.
 
 
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