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.github/workflows/qiita-ci.yml

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strategy:
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matrix:
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python-version: ["2.7", "3.9"]
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python-version: ["3.9"]
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services:
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postgres:
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conda config --add channels conda-forge
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conda create -q --yes -n qiita python=3.9 libgfortran numpy nginx cython redis
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conda activate qiita
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pip install sphinx sphinx-bootstrap-theme nose-timer Click
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- name: Qiita install
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shell: bash -l {0}
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run: |
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conda activate qiita
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pip --quiet install qiita-dev/ --no-binary redbiom
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pip install qiita-dev/ --no-binary redbiom
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mkdir ~/.qiita_plugins
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- name: Install Qiita plugins
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shell: bash -l {0}
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run: |
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conda create --yes -n qiita_client python=${{ matrix.python-version }} pip nose flake8 coverage
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conda activate qiita_client
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pip --quiet install -U pip
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pip --quiet install .
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- name: Starting Main Services
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shell: bash -l {0}
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run: |
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conda activate qiita
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export QIITA_SERVER_CERT=`pwd`/qiita-dev/qiita_core/support_files/server.crt
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export QIITA_CONFIG_FP=`pwd`/qiita-dev/qiita_core/support_files/config_test_local.cfg

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