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fix test_retrive_workflows
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qiita_pet/test/test_software.py

Lines changed: 3 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -144,6 +144,8 @@ def test_retrive_workflows(self):
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'rev_comp_mapping_barcodes': 'True', 'rev_comp': 'False',
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'phred_quality_threshold': '3', 'barcode_type': 'golay_12',
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'max_barcode_errors': '1.5', 'phred_offset': 'auto'}],
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['input_params_7_FASTQ | per_sample_FASTQ', 1,
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'FASTQ | per_sample_FASTQ'],
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['output_params_7_demultiplexed | Demultiplexed', 1,
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'demultiplexed | Demultiplexed'],
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['params_8', 3, 'Pick closed-reference OTUs', 'Defaults', {
@@ -152,7 +154,7 @@ def test_retrive_workflows(self):
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'sortmerna_coverage': '0.97', 'threads': '1'}],
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['output_params_8_OTU table | BIOM', 3, 'OTU table | BIOM']])
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exp[0]['edges'].extend([
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['input_params_1_FASTQ', 'params_7'],
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['input_params_7_FASTQ | per_sample_FASTQ', 'params_7'],
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['params_7', 'output_params_7_demultiplexed | Demultiplexed'],
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['output_params_7_demultiplexed | Demultiplexed', 'params_8'],
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['params_8', 'output_params_8_OTU table | BIOM']])

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