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sbatch add ,
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qiita_db/processing_job.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -253,8 +253,8 @@ def launch_job_scheduler(env_script, start_script, url, job_id, job_dir,
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cmd = [start_script, url, job_id, job_dir]
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lines = [
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'#!/bin/bash'
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f'#SBATCH --error {job_dir}/slurm-error.txt'
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'#!/bin/bash',
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f'#SBATCH --error {job_dir}/slurm-error.txt',
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f'#SBATCH --output {job_dir}/slurm-output.txt']
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lines.append("echo $SLURM_JOBID")
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lines.append("source ~/.bash_profile")

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