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Autotools: Simplify PHP_ADD_BUILD_DIR and ext_* variables usage
The ext_builddir, ext_srdir, and ext_dir variables for the current
extension are set after the PHP_NEW_EXTENSION is called. This now
assignes them in config-stubs and phpize before including the
extension's or SAPI+'s config m4 file'
For example, this enables calling PHP_ADD_BUILD_DIR and some other
macros before the PHP_NEW_EXTENSION and removes some redundant
conditions.
This also fixes missed bug in gd extension include flag.
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