diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml index f338fb6..50727c2 100644 --- a/.github/workflows/ci.yaml +++ b/.github/workflows/ci.yaml @@ -13,7 +13,7 @@ jobs: strategy: fail-fast: true matrix: - python-version: ["3.8", "3.9", "3.10"] + python-version: ["3.8", "3.9", "3.10", "3.11"] steps: - uses: actions/checkout@v3 diff --git a/.gitignore b/.gitignore index 9385734..7ea9d3b 100644 --- a/.gitignore +++ b/.gitignore @@ -1,5 +1,5 @@ contentmap.db - +/scratch Byte-compiled / optimized / DLL files __pycache__/ diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 0000000..bdb8b43 --- /dev/null +++ b/Dockerfile @@ -0,0 +1,21 @@ +FROM ubuntu:22.04 + + +RUN apt update +RUN apt install -y python3-pip libgomp1 libatlas-base-dev liblapack-dev libsqlite3-dev + +WORKDIR /app + +ADD poetry.lock /app/poetry.lock +ADD pyproject.toml /app/pyproject.toml + +RUN pip install poetry +RUN poetry config virtualenvs.create false +RUN poetry install + +RUN python3 -c 'from sentence_transformers import SentenceTransformer; embedder = SentenceTransformer("all-MiniLM-L6-v2")' + + +ADD . /app + +CMD ["pytest", "./tests"] \ No newline at end of file diff --git a/README.md b/README.md index 914a08f..3112f65 100644 --- a/README.md +++ b/README.md @@ -1,3 +1,29 @@ # Content map -A way to share content from a specific domain. Similar to sitemaps but for content. +A way to share content from a specific domain using SQLite as an alternative to +RSS feeds. The purpose of this library is to simply create a dataset for all the +content on your website, using the XML sitemap as a starting point. + + +## Installation + +```bash + +pip install contentmap + +``` + +## Quickstart + +To build your contentmap.db that will contain all your content using your XML +sitemap as a starting point, you only need to write the following: + +```python +from contentmap.sitemap import SitemapToContentDatabase + +database = SitemapToContentDatabase("https://yourblog.com/sitemap.xml") +database.load() + +``` + +You can control how many urls can be crawled concurrently and also set some timeout. \ No newline at end of file diff --git a/contentmap/ftse.py b/contentmap/ftse.py new file mode 100644 index 0000000..e69de29 diff --git a/contentmap/vss.py b/contentmap/vss.py new file mode 100644 index 0000000..c5178e5 --- /dev/null +++ b/contentmap/vss.py @@ -0,0 +1,76 @@ +""" +Class ContentMapVSS to create vector search dataset from a contentmap +dataset already created. +""" +import sqlite3 +from typing import Optional + +import sqlite_vss +from langchain.text_splitter import RecursiveCharacterTextSplitter +from langchain.text_splitter import CharacterTextSplitter +from langchain_community.document_loaders import TextLoader +from langchain_community.embeddings.sentence_transformer import ( + SentenceTransformerEmbeddings, +) +from langchain_community.vectorstores import SQLiteVSS + + +class ContentMapVSS: + + def __init__(self, + connection: Optional[sqlite3.Connection] = None, + db_file: str = "contentmap.db" + ): + + self.connection = connection + if not connection: + self.connection = SQLiteVSS.create_connection(db_file) + + embedding_function = SentenceTransformerEmbeddings( + model_name="all-MiniLM-L6-v2" + ) + self.vss = SQLiteVSS( + table="content_chunks", + embedding=embedding_function, + connection=self.connection + ) + + def load(self): + # content table must be there + assert self.table_exists(table_name="content") + texts, metadatas = self.prepare_texts_and_metadatas() + self.vss.add_texts(texts=texts, metadatas=metadatas) + return self.vss + + def table_exists(self, table_name: str) -> bool: + res = self.connection.execute(f""" + SELECT name + FROM sqlite_master + WHERE type='table' AND name='{table_name}'; + """) + rows = res.fetchall() + if len(rows) == 1: + return True + return False + + def prepare_texts_and_metadatas(self): + cursor = self.connection.cursor() + result = cursor.execute("SELECT content, url FROM content") + rows = result.fetchall() + + # based on Anyscale analysis (https://t.ly/yjgxQ), it looks like the + # sweet spot is 700 chunk size and 50 chunk overlap + text_splitter = CharacterTextSplitter(chunk_size=700, chunk_overlap=50) + + texts = [] + metadatas = [] + for row in rows: + chunks = text_splitter.split_text(row["content"]) + chunk_metadatas = [{"url": row["url"]} for _ in chunks] + texts += chunks + metadatas += chunk_metadatas + + return texts, metadatas + + def similarity_search(self, *args, **kwargs): + return self.vss.similarity_search(*args, **kwargs) \ No newline at end of file diff --git a/poetry.lock b/poetry.lock index 58c93b3..986ace9 100644 --- a/poetry.lock +++ b/poetry.lock @@ -110,6 +110,39 @@ files = [ [package.dependencies] frozenlist = ">=1.1.0" +[[package]] +name = "annotated-types" +version = "0.6.0" +description = "Reusable constraint types to use with typing.Annotated" +optional = false +python-versions = ">=3.8" +files = [ + {file = "annotated_types-0.6.0-py3-none-any.whl", hash = "sha256:0641064de18ba7a25dee8f96403ebc39113d0cb953a01429249d5c7564666a43"}, + {file = "annotated_types-0.6.0.tar.gz", hash = "sha256:563339e807e53ffd9c267e99fc6d9ea23eb8443c08f112651963e24e22f84a5d"}, +] + +[[package]] +name = "anyio" +version = "4.3.0" +description = "High level compatibility layer for multiple asynchronous event loop implementations" +optional = false +python-versions = ">=3.8" +files = [ + {file = 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"9bc55151ac2b231a05d053df071cfb0553d8ec56786ff20b5c1d023fe6ba4f81" diff --git a/pyproject.toml b/pyproject.toml index 033dace..ecdfa3e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -14,6 +14,9 @@ tqdm = "^4.66.1" lxml = "4.9.4" trafilatura = "^1.6.4" aiohttp = "^3.9.1" +sqlite-vss = "^0.1.2" +langchain = "^0.1.8" +sentence-transformers = "^2.3.1" [tool.poetry.group.test.dependencies] diff --git a/tests/conftest.py b/tests/conftest.py index b7014d0..b07bf4c 100644 --- a/tests/conftest.py +++ b/tests/conftest.py @@ -1,5 +1,7 @@ import pytest import os +import os.path as op +import logging @pytest.fixture(autouse=True) @@ -8,5 +10,9 @@ def remove_created_database_after_test(): # Setup logic yield # this is where the testing happens # Teardown logic - os.remove("contentmap.db") + + contentmap_db_path = op.join(op.dirname(__file__), "contentmap.db") + if op.exists(contentmap_db_path): + logging.info('Destroying mock sqlite content instance') + os.remove(contentmap_db_path) diff --git a/tests/fixture.db b/tests/fixture.db new file mode 100644 index 0000000..be757fd Binary files /dev/null and b/tests/fixture.db differ diff --git a/tests/test_fts.py b/tests/test_fts.py new file mode 100644 index 0000000..2ce1362 --- /dev/null +++ b/tests/test_fts.py @@ -0,0 +1,12 @@ +import sqlite3 + + +def test_fts_extension_enabled(): + + con = sqlite3.connect(':memory:') + cur = con.cursor() + cur.execute('pragma compile_options;') + available_pragmas = cur.fetchall() + con.close() + + assert ('ENABLE_FTS5',) in available_pragmas diff --git a/tests/test_vss.py b/tests/test_vss.py new file mode 100644 index 0000000..8775d9e --- /dev/null +++ b/tests/test_vss.py @@ -0,0 +1,50 @@ +from contentmap.vss import ContentMapVSS +import os.path as op +from tests.utils import build_fixture_db + + +class TestContentMapVSS: + + def test_assertion_content_exists(self): + fixture_db = op.join(op.dirname(__file__), "fixture.db") + vss_content = ContentMapVSS(db_file=fixture_db) + assert vss_content.table_exists(table_name="content") is True + + def test_assertion_content_not_exists(self): + vss_content = ContentMapVSS(db_file=":memory:") + assert vss_content.table_exists(table_name="content") is False + + +class TestVssTablesCreation: + + def test_vss_instance(self): + db = build_fixture_db() + cm_vss = ContentMapVSS(db_file=db) + cm_vss.load() + assert cm_vss.table_exists("content_chunks") + + def test_prepare_texts_and_metadatas(self): + db = build_fixture_db() + cm_vss = ContentMapVSS(db_file=db) + texts, metadatas = cm_vss.prepare_texts_and_metadatas() + assert len(texts) == len(metadatas) >= 1 + + def test_chunk_table(self): + db = build_fixture_db() + cm_vss = ContentMapVSS(db_file=db) + cm_vss.load() + assert cm_vss.table_exists("content_chunks") + cursor = cm_vss.connection.cursor() + res = cursor.execute("SELECT * FROM content_chunks") + rows = res.fetchall() + assert len(rows) >= 15 + + def test_similarity_search(self): + db = build_fixture_db() + cm_vss = ContentMapVSS(db_file=db) + cm_vss.load() + data = cm_vss.similarity_search(query="who is Mistral ai company?", k=2) + assert len(data) == 2 + metadatas = [doc.metadata for doc in data] + for meta in metadatas: + assert meta.get("url") == "https://philippeoger.com/pages/ai-scene-in-europe-last-week/" diff --git a/tests/utils.py b/tests/utils.py new file mode 100644 index 0000000..5e0b94c --- /dev/null +++ b/tests/utils.py @@ -0,0 +1,9 @@ +import os.path as op +import shutil + + +def build_fixture_db(): + fixture_db = op.join(op.dirname(__file__), 'fixture.db') + dest = op.join(op.dirname(__file__), 'contentmap.db') + shutil.copy(fixture_db, dest) + return dest