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[PRE REVIEW]: dpest: Streamlining Creation of PEST input files for DSSAT Crop Model Calibration #7939

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editorialbot opened this issue Mar 21, 2025 · 10 comments
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Submitting author: @DS4Ag (Luis Vargas Rojas)
Repository: https://github.com/DS4Ag/dpest
Branch with paper.md (empty if default branch):
Version: v1.1.3
Editor: Pending
Reviewers: Pending
Managing EiC: Kristen Thyng

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/79d8e7489be8aaa0bfee0737df6cd5d9"><img src="https://joss.theoj.org/papers/79d8e7489be8aaa0bfee0737df6cd5d9/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/79d8e7489be8aaa0bfee0737df6cd5d9/status.svg)](https://joss.theoj.org/papers/79d8e7489be8aaa0bfee0737df6cd5d9)

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Thanks for submitting your paper to JOSS @DS4Ag. Currently, there isn't a JOSS editor assigned to your paper.

@DS4Ag if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

Editor instructions

The JOSS submission bot @editorialbot is here to help you find and assign reviewers and start the main review. To find out what @editorialbot can do for you type:

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@editorialbot editorialbot added pre-review Track: 6 (ESE) Earth Sciences and Ecology labels Mar 21, 2025
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Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@editorialbot commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.3390/jimaging4040052 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: Decision Support System for Agrotechnology Transfe...
- No DOI given, and none found for title: How Can We Streamline Wheat Model Calibration with...

❌ MISSING DOIs

- 10.1111/gwat.12360 may be a valid DOI for title: Calibration and Uncertainty Analysis for Complex E...

❌ INVALID DOIs

- None

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Software report:

github.com/AlDanial/cloc v 1.98  T=0.06 s (1240.5 files/s, 244369.8 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
HTML                            17           1037              0           4085
SVG                              2              0              0           2676
CSS                              6            321             45           1292
Python                          13            590            817           1148
JavaScript                      11            158            210           1128
YAML                             6             37             70            478
reStructuredText                15            155            193            186
Markdown                         2             54              0            148
Jupyter Notebook                 1              0            176             40
TeX                              1              3              0             35
TOML                             1              5              0             27
DOS Batch                        1              8              1             26
make                             1              4              7              9
-------------------------------------------------------------------------------
SUM:                            77           2372           1519          11278
-------------------------------------------------------------------------------

Commit count by author:

    99	luizvargaz
    12	Luis Vargas Rojas

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Paper file info:

📄 Wordcount for paper.md is 907

✅ The paper includes a Statement of need section

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👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

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License info:

🟡 License found: GNU General Public License v3.0 (Check here for OSI approval)

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⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

@kthyng
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kthyng commented Mar 21, 2025

Hi @DS4Ag and thanks for your submission! I am looking for some specific items to make sure your submission fits our requirements at a high level (not at the more detailed review level) before moving on to finding an editor or putting this on our waitlist if no relevant editors are available. I'll comment over time as I have a chance to go through them:

In the meantime, please take a look at the comments above ⬆️ from the editorialbot to address any DOI, license, or paper issues if you're able (there may not be any), or suggest reviewers. For reviewers, please suggest 5 reviewers from the database listed above or your own (non-conflicted) extended network. Their github handles are most useful to receive but please don't use "@" to reference them since it will prematurely ping them.

@DS4Ag
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DS4Ag commented Mar 21, 2025

Hi @kthyng, thank you for reviewing the submission.

We have addressed the comments from the editorialbot
Regarding reviewers, we suggest the following:

  • aleaf – Previously reviewed a paper that describes a Python tool similar to dpest, which also creates PEST input files but for MIKE SHE, a hydrological modeling software.
  • ecomodeller – Previously reviewed a paper that describes a Python tool similar to dpest, which also creates PEST input files but for MIKE SHE, a hydrological modeling software.
  • VEZY – Expertise in crop models and agronomic research.
  • tenemark – Author of a JOSS paper on a Python tool similar to dpest.
  • robbibt – Expertise in remote sensing and crop modeling.

Please let us know if any additional changes are required. We appreciate your time and feedback on this submission.

@DS4Ag
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DS4Ag commented Mar 25, 2025

@DRWang3

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