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README.md

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<!-- TODO nf-core: Include a figure that guides the user through the major workflow steps. Many nf-core
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workflows use the "tube map" design for that. See https://nf-co.re/docs/contributing/design_guidelines#examples for examples. -->
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[![work map] (https://github.com/oist/plessy_pairwiseGenomeComparison/blob/dev/assets/tube_map.svg)]
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<img src= "assets/tube_map.svg">
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<!--img src= "assets/tube_map.svg" -->
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<!-- TODO nf-core: Fill in short bullet-pointed list of the default steps in the pipeline -->
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1. Read QC ([`FastQC`](https://www.bioinformatics.babraham.ac.uk/projects/fastqc/))

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