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example_genes.md

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More novel transcripts unique to Patowary dataset

UBE4B MTOR KAZN KCNAB2

More novel transcripts unique to SFARI dataset

AGTRAP SCN2A

Most transcripts overlapped between the two datasets

MUL1

  • Count up the number of genes that have more transcripts in the SFARI dataset than Patowary
  • For SCN2A, look into the coverage bias between Patowary and SFARI transcripts
  • Is there a relationship between gene expression and the number of detected transcripts? Average gene expression across samples or test each time point separately
  • Change dataset name from "TALON" to "Patowary"
  • Add context on the abudance of the individual transcripts
  • Colour novel exons
  • COlour first and last exons if they have novel TSS and TES
  • Calculate the number of novel exons in the SFARI dataset that overlaps with the Patowary paper