- fix
--sort-by-name FILE(where FILE contains original names if--rename -from-fileis also used. - remove trailing whitespace from terminal output
- fix --rename-from-file [GH7]
- python3 support
- add dependency on
fastalite - remove
colorbrewerfrom setup.py and hide --annotation-file option whencolorbreweris not installed - add tests, and configure automated testing on Travis CI
- add CHANGES.rst (better late than never!)
- add option -R/--trim-to