diff --git a/.nf-core.yml b/.nf-core.yml index 99e7478b..b6ad47c7 100644 --- a/.nf-core.yml +++ b/.nf-core.yml @@ -2,32 +2,32 @@ bump_version: lint: actions_ci: false files_exist: - - CODE_OF_CONDUCT.md - - assets/nf-core-germline_logo_light.png - - docs/images/nf-core-germline_logo_light.png - - docs/images/nf-core-germline_logo_dark.png - - .github/ISSUE_TEMPLATE/config.yml - - .github/workflows/awstest.yml - - .github/workflows/awsfulltest.yml - - .github/workflows/template_version_comment.yml - - docs/README.md + - CODE_OF_CONDUCT.md + - assets/nf-core-germline_logo_light.png + - docs/images/nf-core-germline_logo_light.png + - docs/images/nf-core-germline_logo_dark.png + - .github/ISSUE_TEMPLATE/config.yml + - .github/workflows/awstest.yml + - .github/workflows/awsfulltest.yml + - .github/workflows/template_version_comment.yml + - docs/README.md files_unchanged: - - .github/CONTRIBUTING.md - - .github/PULL_REQUEST_TEMPLATE.md - - .github/workflows/branch.yml - - .github/workflows/linting_comment.yml - - .github/workflows/linting.yml - - CODE_OF_CONDUCT.md - - .github/ISSUE_TEMPLATE/bug_report.yml - - .prettierignore + - .github/CONTRIBUTING.md + - .github/PULL_REQUEST_TEMPLATE.md + - .github/workflows/branch.yml + - .github/workflows/linting_comment.yml + - .github/workflows/linting.yml + - CODE_OF_CONDUCT.md + - .github/ISSUE_TEMPLATE/bug_report.yml + - .prettierignore multiqc_config: - - report_comment + - report_comment nextflow_config: - - custom_config - - manifest.name - - manifest.homePage - - validation.help.afterText - - validation.summary.afterText + - custom_config + - manifest.name + - manifest.homePage + - validation.help.afterText + - validation.summary.afterText subworkflow_changes: false nf_core_version: 3.0.2 repository_type: pipeline @@ -41,6 +41,6 @@ template: org: nf-cmgg outdir: . skip_features: - - fastqc - - is_nfcore + - fastqc + - is_nfcore version: 1.9.3