diff --git a/README.md b/README.md index d58d8fa..b777edc 100644 --- a/README.md +++ b/README.md @@ -6,8 +6,6 @@ dbGaP is the Database of Genotypes and Phenotypes.
FHIR is HL7's REST API standard for electronic medical data. - [**Quickstart**](quickstart.md) -- [**Mapping dbGaP concepts to FHIR concepts**](https://dbgap-api-preview.ncbi.nlm.nih.gov/fhir-mapping/interactive/) - - Note: this mapping will be retired and replaced by alternate documentation in future - [**Notebooks**](jupyter) ## Prerequisites @@ -40,8 +38,7 @@ ever come. If you report a bug or request a feature, it will probably be overlooked and neglected. -- The CSV download for the interactive concept mapping does - not handle quoting correctly. You'll need to hand-edit it. +- There is no documentation showing how the dbGaP submitted resources map to FHIR resources. - If you have a query that returns after 20 seconds with an error that looks like the below: diff --git a/quickstart.md b/quickstart.md index e07efe1..96ecf9d 100644 --- a/quickstart.md +++ b/quickstart.md @@ -1,6 +1,6 @@ # Location -The dbGaP FHIR API is available at [http://dbgap-api.ncbi.nlm.nih.gov/fhir/x1](http://dbgap-api.ncbi.nlm.nih.gov/fhir/x1). It is a standard FHIR API. The documentation for FHIR is at . This guide is just a quick-start. We have documented how dbGaP concepts map to FHIR resources at [https://dbgap-api.ncbi.nlm.nih.gov/fhir-mapping/interactive](https://dbgap-api.ncbi.nlm.nih.gov/fhir-mapping/interactive). +The dbGaP FHIR API is available at [http://dbgap-api.ncbi.nlm.nih.gov/fhir/x1](http://dbgap-api.ncbi.nlm.nih.gov/fhir/x1). It is a standard FHIR API. The documentation for FHIR is at . This guide is just a quick-start. ## Follow Along with Postman Postman is an API testing application you can [download for free](https://www.postman.com/downloads/).