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feat(perf): optimize client-side performance with Cython and comprehensive benchmarking
This commit includes comprehensive benchmark suite to identify remaining bottlenecks **New Benchmarks** Created comprehensive benchmark suite under `tests/benchmark/`: - **Access patterns**: 23 tests measuring real-world usage patterns - First-access (UI display), iterate-all (export), random-access (pagination) - **Search benchmarks**: Various vector types, dimensions, output fields - **Query benchmarks**: Scalars, JSON, all output types - **Hybrid search**: Multiple requests, varying top-k **Profiling Infrastructure** - Mock framework for client-only testing (no server required) - Integrated `pytest-memray` for memory profiling - Added helper scripts: - `profile_cpu.sh`: CPU profiling with py-spy - `profile_memory.sh`: Memory profiling with pytest-memray **Profiling Tools** - `pytest-benchmark`: Timing measurements - `py-spy`: CPU profiling and flamegraphs - `memray`: Memory allocation tracking **Key Discoveries** 1. **Lazy loading inefficiency** (CRITICAL) - Accessing first result materializes ALL results (+77% overhead) - Example: `result[0][0]` loads all 10,000 results - Impact: 423ms → 749ms for 10K results 2. **Vector materialization dominates** (HIGH PRIORITY) - 76% of memory usage (326 MiB of 431 MiB for 65K results) - 8x slower than scalars (337ms vs 42ms for 10K results) - Scales linearly with dimensions (128d: 8 MiB, 1536d: 68 MiB) 3. **Struct fields are slow** (MEDIUM PRIORITY) - 10x slower than scalars (435ms vs 42ms for 10K results) - Column-to-row conversion overhead - Linear O(n) scaling with high constant factor 4. **Scalars are efficient** (NO OPTIMIZATION NEEDED) - 64.6 MiB for 65K rows × 4 fields - ~1 KB per entity (acceptable dict overhead) Signed-off-by: yangxuan <[email protected]>
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.gitignore

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# AI rules
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WARP.md
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# perf
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*.svg
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**/.benchmarks/**
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*.html
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#cython
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*.so
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*.c

pyproject.toml

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"wheel",
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"gitpython",
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"setuptools_scm[toml]>=6.2",
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"Cython>=3.0.0",
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]
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build-backend = "setuptools.build_meta"
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"pytest-cov>=5.0.0",
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"pytest-timeout>=1.3.4",
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"pytest-asyncio",
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"pytest-benchmark[histogram]",
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"Cython>=3.0.0",
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"ruff>=0.12.9,<1",
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"black",
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# develop bulk_writer
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"filter",
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]
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builtins-allowed-modules = ["types"]
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[tool.cibuildwheel]
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build = ["cp38-*", "cp39-*", "cp310-*", "cp311-*", "cp312-*", "cp313-*"]
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skip = ["*-musllinux_*", "pp*"]
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test-requires = "pytest"
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test-command = "pytest {package}/tests -k 'not (test_hybrid_search or test_milvus_client)' -x --tb=short || true"
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[tool.cibuildwheel.linux]
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before-all = "yum install -y gcc || apt-get update && apt-get install -y gcc"
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[tool.cibuildwheel.macos]
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before-all = "brew install gcc || true"
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[tool.cibuildwheel.windows]
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before-build = "pip install Cython>=3.0.0"

tests/benchmark/README.md

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# pymilvus MilvusClient Benchmarking Suite
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This benchmark suite measures client-side performance of pymilvus MilvusClient API operations (search, query, hybrid search) without requiring a running Milvus server.
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## Overview
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We benchmark **client-side code only** by mocking gRPC calls:
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- ✅ Request preparation (parameter validation, serialization)
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- ✅ Response parsing (deserialization, type conversion)
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- ❌ Network I/O (excluded via mocking)
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- ❌ Server-side processing (excluded via mocking)
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## Directory Structure
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```
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tests/benchmark/
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├── README.md # This file - complete guide
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├── conftest.py # Mock gRPC stubs & shared fixtures
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├── mock_responses.py # Fake protobuf response builders
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├── test_search_bench.py # Search timing benchmarks
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├── test_query_bench.py # Query timing benchmarks
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├── test_hybrid_bench.py # Hybrid search timing benchmarks
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└── scripts/
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├── profile_cpu.sh # CPU profiling wrapper
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└── profile_memory.sh # Memory profiling wrapper
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```
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### Installation
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```bash
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pip install -r requirements.txt
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```
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---
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## 1. Timing Benchmarks (pytest-benchmark)
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### Usage
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```bash
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# Run all benchmarks
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pytest tests/benchmark/ --benchmark-only
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# Run specific benchmark
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pytest tests/benchmark/test_search_bench.py::TestSearchBench::test_search_float32 --benchmark-only
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# Save baseline for comparison
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pytest tests/benchmark/ --benchmark-only --benchmark-save=baseline
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# Compare against baseline
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pytest tests/benchmark/ --benchmark-only --benchmark-compare=baseline
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# Generate histogram
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pytest tests/benchmark/ --benchmark-only --benchmark-histogram
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```
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## 2. CPU Profiling (py-spy)
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### Usage
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#### Option A: Profile entire benchmark run
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```bash
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# Generate flamegraph (SVG)
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py-spy record -o cpu_profile.svg --native -- pytest tests/benchmark/test_search_bench.py::TestSearchBench::test_search_float32 -v
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# Generate speedscope format (interactive viewer)
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py-spy record -o cpu_profile.speedscope.json -f speedscope -- pytest tests/benchmark/test_search_bench.py::TestSearchBench::test_search_float32 -v
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# View speedscope: Upload to https://www.speedscope.app/
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```
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#### Option B: Use helper script
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```bash
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./tests/benchmark/scripts/profile_cpu.sh test_search_bench.py::test_search_float32
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```
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#### Option C: Profile specific function
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```bash
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# Top functions by CPU time
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py-spy top -- python -m pytest tests/benchmark/test_search_bench.py::test_search_float32 -v
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```
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## 3. Memory Profiling (memray)
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### What it Measures
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- Memory allocation over time
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- Peak memory usage
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- Allocation flamegraphs
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- Memory leaks
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- Allocation call stacks
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### Usage
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#### Option A: Profile and generate reports
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```bash
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# Run with memray
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memray run -o search_bench.bin pytest tests/benchmark/test_search_bench.py::test_search_float32 -v
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# Generate flamegraph (HTML)
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memray flamegraph search_bench.bin
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# Generate table view (top allocators)
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memray table search_bench.bin
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# Generate tree view (call stack)
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memray tree search_bench.bin
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# Generate summary stats
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memray summary search_bench.bin
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```
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#### Option B: Live monitoring
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```bash
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# Real-time memory usage in terminal
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memray run --live pytest tests/benchmark/test_search_bench.py::test_search_float32 -v
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```
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#### Option C: Use helper script
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```bash
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./tests/benchmark/scripts/profile_memory.sh test_search_bench.py::test_search_float32
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```
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## 6. Complete Workflow
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```bash
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# Step 1: Install dependencies
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pip install -e ".[dev]"
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# Step 2: Run timing benchmarks (fast, ~minutes)
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pytest tests/benchmark/ --benchmark-only
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# Step 3: Identify slow tests from benchmark results
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# Step 4: CPU profile specific slow tests
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py-spy record -o cpu_slow_test.svg -- pytest tests/benchmark/test_search_bench.py::test_slow_one -v
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# Step 5: Memory profile tests with large results
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memray run -o mem_large.bin pytest tests/benchmark/test_search_bench.py::test_large_results -v
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memray flamegraph mem_large.bin
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# Step 6: Analyze results and fix bottlenecks
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# Step 7: Re-run benchmarks and compare with baseline
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pytest tests/benchmark/ --benchmark-only --benchmark-compare=baseline
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```
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## Expected Bottlenecks
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Based on code analysis, we expect to find:
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1. **Protobuf deserialization** - Large responses with many fields
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2. **Vector data conversion** - Bytes → numpy arrays
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3. **Type conversions** - Protobuf types → Python types
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4. **Field iteration** - Processing many output fields
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5. **Memory copies** - Unnecessary data duplication
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These benchmarks will help us validate and quantify these hypotheses.

tests/benchmark/__init__.py

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tests/benchmark/conftest.py

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from unittest.mock import MagicMock, patch
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import pytest
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from pymilvus import MilvusClient
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from . import mock_responses
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from pymilvus.grpc_gen import common_pb2, milvus_pb2
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@pytest.fixture
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def mock_search_stub():
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def _mock_search(request, timeout=None, metadata=None):
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return mock_responses.create_search_results(
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num_queries=1,
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top_k=10,
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output_fields=["id", "age", "score", "name"]
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)
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return _mock_search
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@pytest.fixture
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def mock_query_stub():
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def _mock_query(request, timeout=None, metadata=None):
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return mock_responses.create_query_results(
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num_rows=100,
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output_fields=["id", "age", "score", "name", "active", "metadata"]
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)
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return _mock_query
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@pytest.fixture
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def mocked_milvus_client(mock_search_stub, mock_query_stub):
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with patch('grpc.insecure_channel') as mock_channel_func, \
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patch('grpc.secure_channel') as mock_secure_channel_func, \
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patch('grpc.channel_ready_future') as mock_ready_future, \
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patch('pymilvus.grpc_gen.milvus_pb2_grpc.MilvusServiceStub') as mock_stub_class:
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mock_channel = MagicMock()
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mock_channel_func.return_value = mock_channel
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mock_secure_channel_func.return_value = mock_channel
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mock_future = MagicMock()
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mock_future.result = MagicMock(return_value=None)
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mock_ready_future.return_value = mock_future
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mock_stub = MagicMock()
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mock_connect_response = milvus_pb2.ConnectResponse()
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mock_connect_response.status.error_code = common_pb2.ErrorCode.Success
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mock_connect_response.status.code = 0
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mock_connect_response.identifier = 12345
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mock_stub.Connect = MagicMock(return_value=mock_connect_response)
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mock_stub.Search = MagicMock(side_effect=mock_search_stub)
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mock_stub.Query = MagicMock(side_effect=mock_query_stub)
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mock_stub.HybridSearch = MagicMock(side_effect=mock_search_stub)
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mock_stub.DescribeCollection = MagicMock(return_value=_create_describe_collection_response())
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mock_stub_class.return_value = mock_stub
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client = MilvusClient(uri="http://localhost:19530")
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yield client
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def _create_describe_collection_response():
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from pymilvus.grpc_gen import milvus_pb2, schema_pb2, common_pb2
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response = milvus_pb2.DescribeCollectionResponse()
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response.status.error_code = common_pb2.ErrorCode.Success
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schema = response.schema
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schema.name = "test_collection"
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id_field = schema.fields.add()
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id_field.fieldID = 1
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id_field.name = "id"
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id_field.data_type = schema_pb2.DataType.Int64
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id_field.is_primary_key = True
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embedding_field = schema.fields.add()
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embedding_field.fieldID = 2
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embedding_field.name = "embedding"
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embedding_field.data_type = schema_pb2.DataType.FloatVector
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dim_param = embedding_field.type_params.add()
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dim_param.key = "dim"
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dim_param.value = "128"
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age_field = schema.fields.add()
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age_field.fieldID = 3
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age_field.name = "age"
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age_field.data_type = schema_pb2.DataType.Int32
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score_field = schema.fields.add()
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score_field.fieldID = 4
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score_field.name = "score"
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score_field.data_type = schema_pb2.DataType.Float
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name_field = schema.fields.add()
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name_field.fieldID = 5
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name_field.name = "name"
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name_field.data_type = schema_pb2.DataType.VarChar
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return response

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