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setup.py
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import os
import glob
from setuptools import setup, Extension
extension = Extension('pytrf',
sources = glob.glob('src/*.c'),
)
description = (
"pytrf is a python package for finding tandem repeats from genomic sequences"
)
with open('README.rst') as fh:
long_description = fh.read()
with open(os.path.join('src', 'version.h')) as fh:
version = fh.read().split()[2].strip('"')
setup(
name = 'pytrf',
version = version,
ext_modules = [extension],
description = description,
long_description = long_description,
author = 'Lianming Du',
author_email = '[email protected]',
url = 'https://github.com/lmdu/pytrf',
license = 'MIT',
keywords = 'bioinformatics microsatellite tandem repeats',
classifiers = [
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Developers",
"Intended Audience :: Education",
"Intended Audience :: Science/Research",
"Natural Language :: English",
"License :: OSI Approved :: MIT License",
"Programming Language :: C",
"Programming Language :: Python :: 3.6",
"Programming Language :: Python :: 3.7",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Operating System :: Microsoft :: Windows",
"Operating System :: POSIX :: Linux",
"Operating System :: Unix",
"Topic :: Scientific/Engineering :: Bio-Informatics"
],
entry_points = {
'console_scripts': ['pytrf = pytrfcli:main']
},
py_modules = ["pytrfcli"],
install_requires = [
"pyfastx>=2.1.0"
],
test_suite = "tests"
)