Update medtr.Cheng_Li_2018.yml

Author: rnelson-3

Medicago/truncatula/studies/medtr.Cheng_Li_2018.yml

@@ -9,11 +9,15 @@ confidence: 5
 curators:
   - Raegan Nelson
 comments:
-  -
-phenotype_synopsis:
+  - MtFULc is required for the secondary inflorescence identity
+  - MtFULc regulates secondary inflorescence meristem identity by repressing the expression of MtTFL1 and MtAP1
+  - MtFULc was highly expressed in secondary inflorescence meristems, but not detectable in primary inflorescence meristem or any other floral organs
+phenotype_synopsis: MtFULc regulates secondary inflorescence meristem identity
 traits:
-  - entity_name:
-    entity:
+  - entity_name: secondary branching of inflorescence
+    entity: TO:0000142
+  - entity_name: inflorescence morphology trait
+    entity: TO:0000373
 references:
   - citation: Cheng, Li et al., 2018
     doi: 10.1242/dev.158766
@@ -22,18 +26,23 @@ references:
 scientific_name: Medicago truncatula
 gene_symbols:
   - MtTFL1
-gene_symbol_long:
+gene_symbol_long: TERMINAL FLOWER 1
 gene_model_pub_name: Medtr7g104460
 gene_model_full_id: medtr.A17_HM341.gnm4.ann2.Medtr7g104460
 confidence: 5
 curators:
   - Raegan Nelson
 comments:
-  -
-phenotype_synopsis:
+  - Mutated MtTFL1 changes the inflorescence branching pattern from monopodial to sympodial
+  - MtTFL1 is epistatic to MtFULc in the regulation of inflorescence development
+  - MtTFL1 is highly expressed in the central part of the primary inflorescence meristem, but was not detected in secondary inflorescence meristem and floral primordia
+  - MtTFL1 was also expressed in the center of axillary meristems
+phenotype_synopsis: MtTFL1 regulates primary inflorescence development
 traits:
-  - entity_name:
-    entity:
+  - entity_name: primary branching of inflorescence
+    entity: TO:0000052
+  - entity_name: shoot meristem development
+    entity: TO:0002638
 references:
   - citation: Cheng, Li et al., 2018
     doi: 10.1242/dev.158766
@@ -49,11 +58,13 @@ confidence: 5
 curators:
   - Raegan Nelson
 comments:
-  -
-phenotype_synopsis:
+  - MtSGL1 plays a synergistic role with MtAP1 in floral meristem identity
+  - Mutated MtSGL1 exhibited simple leaves and cauliflower-like structures consisting of reiterated sepals and carpels
+  - SGL1 expression was detected in the leaf primordia, floral meristems, and floral organ primordia
+phenotype_synopsis: MtSGL1 regulates compound leaf development
 traits:
-  - entity_name:
-    entity:
+  - entity_name: compound leaf morphology trait
+    entity: TO:0001121
 references:
   - citation: Cheng, Li et al., 2018
     doi: 10.1242/dev.158766
@@ -62,18 +73,22 @@ references:
 scientific_name: Medicago truncatula
 gene_symbols:
   - MtAP1
-gene_symbol_long:
+gene_symbol_long: APETALA 1
 gene_model_pub_name: Medtr3g098560
 gene_model_full_id: medtr.A17_HM341.gnm4.ann2.Medtr3g098560
 confidence: 5
 curators:
   - Raegan Nelson
 comments:
-  -
-phenotype_synopsis:
+  - The MtAP1 mutant developed proliferating mixtures of abnormal flowers, vegetative shoots or leaf-like structures at the end of pedicels instead of one or two flowers as seen on the WT
+  - MtAP1 was detectable in sepals and petals, but not in stamen primordia and carpel primordia. In lates stage floral development MtAP1 is only found in the petals
+  - MtAP1 represses MtTFL1 expression in floral meristems
+phenotype_synopsis: MtAP1 regulates floral meristem identity
 traits:
-  - entity_name:
-    entity:
+  - entity_name: floral organ identity
+    entity: TO:0006019
+  - entity_name: meristem identity
+    entity: TO:0006017
 references:
   - citation: Cheng, Li et al., 2018
     doi: 10.1242/dev.158766