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cleaned figure tutorial 4
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docs/sphinx/source/tutorials/figures/level2/nanosheared-electrolyte/equilibration-pyplot.ipynb

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docs/sphinx/source/tutorials/figures/level2/nanosheared-electrolyte/minimization-pyplot.ipynb

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docs/sphinx/source/tutorials/figures/level2/nanosheared-electrolyte/shearing-pyplot.ipynb

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docs/sphinx/source/tutorials/figures/level2/polymer-in-water/distance-pyplot.ipynb

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"outputs": [],
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"source": [
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"import numpy as np\n",
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"import sys, os, git\n",
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"from matplotlib import pyplot as plt"
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"import sys, os, git, lammps_logfile\n",
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"import warnings\n",
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"warnings.filterwarnings(\"ignore\")"
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]
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},
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{

docs/sphinx/source/tutorials/level2/nanosheared-electrolyte.rst

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of the 3 steps, before re-increasing a little after the
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temperature is increased from 1 to :math:`300\,\text{K}`.
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.. figure:: ../figures/level2/nanosheared-electrolyte/minimization-light.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/minimization.png
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:alt: Energy minimisation of the confined water and salt
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:class: only-light
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.. figure:: ../figures/level2/nanosheared-electrolyte/minimization-dark.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/minimization-dm.png
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:alt: Energy minimisation of the confined water and salt
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:class: only-dark
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the distance between the two walls
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reduces until it reaches an equilibrium value.
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.. figure:: ../figures/level2/nanosheared-electrolyte/equilibration-light.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/equilibration.png
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:alt: Plot showing the distance between the walls as a function of time.
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:class: only-light
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.. figure:: ../figures/level2/nanosheared-electrolyte/equilibration-dark.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/equilibration-dm.png
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:alt: Plot showing the distance between the walls as a function of time.
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:class: only-dark
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can be plotted. As expected for such Couette flow geometry, the velocity
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of the fluid is found to increase linearly along :math:`z`.
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.. figure:: ../figures/level2/nanosheared-electrolyte/shearing-light.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/shearing.png
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:alt: Velocity of the nanosheared fluid
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:class: only-light
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.. figure:: ../figures/level2/nanosheared-electrolyte/shearing-dark.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/shearing-dm.png
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:alt: Velocity of the nanosheared fluid
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:class: only-dark
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along the *z* axis. The line is a linear fit assuming that
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the pore size is :math:`h = 1.8\,\text{nm}`.
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.. figure:: ../figures/level2/nanosheared-electrolyte/density-light.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/density.png
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:alt: density of the nanosheared fluid
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:class: only-light
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.. figure:: ../figures/level2/nanosheared-electrolyte/density-dark.png
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.. figure:: ../figures/level2/nanosheared-electrolyte/density-dm.png
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:alt: density of the nanosheared fluid
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:class: only-dark
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