paper.bib

@article{Hanke_2021,
	doi = {10.1515/nf-2020-0037},
	url = {https://doi.org/10.1515/nf-2020-0037},
	year = 2021,
	month = {jan},
	publisher = {Walter de Gruyter {GmbH}},
	volume = {27},
	number = {1},
	author = {Michael Hanke and Franco Pestilli and Adina S. Wagner and Christopher J. Markiewicz and Jean-Baptiste Poline and Yaroslav O. Halchenko},
	title = {In defense of decentralized research data management},
	journal = {Neuroforum}
}

@misc{datalad-container:zenodo,
  doi = {10.5281/ZENODO.2431914},
  url = {https://zenodo.org/record/2431914},
  author = {Meyer, Kyle and Hanke, Michael and Halchenko, Yaroslav and Poldrack, Benjamin and Wagner, Adina},
  title = {{datalad-container}: {DataLad} extension for working with computational containers},
  publisher = {Zenodo},
  year = {2021},
  copyright = {Open Access}
}

@misc{datalad-crawler:zenodo,
  doi = {10.5281/ZENODO.2558512},
  url = {https://zenodo.org/record/2558512},
  author = {Halchenko, Yaroslav and Hanke, Michael and Meyer, Kyle and Olson, Taylor and {Chaselgrove} and Poldrack, Benjamin},
  title = {{datalad-crawler}: {DataLad} extension for crawling external resources},
  publisher = {Zenodo},
  year = {2021},
  copyright = {Open Access}
}

@misc{datalad-neuroimaging:zenodo,
  doi = {10.5281/ZENODO.3874225},
  url = {https://zenodo.org/record/3874225},
  author = {Hanke, Michael and Halchenko, Yaroslav and Poldrack, Benjamin and Meyer, Kyle},
  title = {{datalad-neuroimaging}: {DataLad} extension for neuroimaging},
  publisher = {Zenodo},
  year = {2020},
  copyright = {Open Access}
}

@misc{datalad-osf:zenodo,
  doi = {10.5281/ZENODO.3900277},
  url = {https://zenodo.org/record/3900277},
  author = {Hanke, Michael and Poldrack, Benjamin and Wagner, Adina S. and Huijser, Dorien and Sahoo, Ashish K. and Boos, Moritz and Steinkamp, Simon R. and Guenther, Nick and Appelhoff, Stefan},
  keywords = {data management, data distribution, execution provenance tracking, version control},
  title = {{datalad-osf}: {DataLad} extension for integration with OSF.io},
  publisher = {Zenodo},
  year = {2021},
  copyright = {MIT License}
}

@book{datalad-handbook:zenodo,
  doi = {10.5281/ZENODO.4495560},
  url = {https://zenodo.org/record/4495560},
  author = {Wagner, Adina S. and Waite, Laura K. and Meyer, Kyle and Heckner, Marisa K. and Kadelka, Tobias and Reuter, Niels and Waite, Alexander Q. and Poldrack, Benjamin and Markiewicz, Christopher J. and Halchenko, Yaroslav O. and Vavra, Peter and Chormai, Pattarawat and Poline, Jean-Baptiste and Paas, Lya K. and Herholz, Peer and Mochalski, Lisa N. and Kraljevic, Nevena and Wiersch, Lisa and Hutton, Alexandre and Pustina, Dorian and Baagil, Hamzah Hamid and Glatard, Tristan and Oliveira, Sarah and Ippoliti, Giulia and Mönch, Christian and Huijser, Dorien and Togaru, Surya T. and Rokem, Ariel and Gau, Rémi and Bomba, Judith and Wierzba, Małgorzata and Appelhoff, Stefan and Joseph, Michael and Hanke, Michael},
  keywords = {data management, book, datalad, version control, teaching resource},
  title = {The {DataLad} {H}andbook},
  publisher = {Zenodo},
  year = {2021},
  copyright = {Creative Commons Attribution Share Alike 4.0 International}
}

@inbook{datalad-handbook:use-cases,
  author = {Wagner, Adina S. and Waite, Laura K. and Meyer, Kyle and Heckner, Marisa K. and Kadelka, Tobias and Reuter, Niels and Waite, Alexander Q. and Poldrack, Benjamin and Markiewicz, Christopher J. and Halchenko, Yaroslav O. and Vavra, Peter and Chormai, Pattarawat and Poline, Jean-Baptiste and Paas, Lya K. and Herholz, Peer and Mochalski, Lisa N. and Kraljevic, Nevena and Wiersch, Lisa and Hutton, Alexandre and Pustina, Dorian and Baagil, Hamzah Hamid and Glatard, Tristan and Oliveira, Sarah and Ippoliti, Giulia and Mönch, Christian and Huijser, Dorien and Togaru, Surya T. and Rokem, Ariel and Gau, Rémi and Bomba, Judith and Wierzba, Małgorzata and Appelhoff, Stefan and Joseph, Michael and Hanke, Michael},
  title = {The {DataLad} {H}andbook: {U}se {C}ases},
  url = {http://handbook.datalad.org/usecases/intro.html},
  year = {2021},
  copyright = {Creative Commons Attribution Share Alike 4.0 International}
}

@inbook{datalad-handbook:cheatsheet,
  author = {Wagner, Adina S.},
  title = {The {DataLad} {H}andbook: {C}heatsheet},
  url = {http://handbook.datalad.org/r.html?cheatsheet},
  year = {2020},
  copyright = {Creative Commons Attribution Share Alike 4.0 International}
}

@misc{git-annex:special_remotes_protocol,
    author = {Hess, Joey},
    title = {git-annex: external special remote protocol},
    url = {https://git-annex.branchable.com/design/external_special_remote_protocol/},
    copyright = {Open Access},
    year = {2013}
}

@misc{git-annex:special_remotes,
    author = {Hess, Joey},
    title = {git-annex: special remotes},
    url = {https://git-annex.branchable.com/special_remotes/},
    copyright = {Open Access},
    year = {2011}
}

@misc{git-annex:projects-datalad,
    author = {Hess, Joey and {DataLad Team}},
    title = {git-annex: {DataLad} project - bug and todo report},
    url = {https://git-annex.branchable.com/projects/datalad},
    copyright = {Open Access},
    year = {2016}
}

@misc{yoda:myyoda,
    title = {{YODA}: {README}},
    author = {{YODA Team}},
    url = {https://github.com/myyoda/myyoda},
    copyright = {Open Access},
    year = {2021}
}

@article{FAIR2016,
	doi = {10.1038/sdata.2016.18},
	url = {https://doi.org/10.1038/sdata.2016.18},
	year = 2016,
	month = {mar},
	publisher = {Springer Science and Business Media {LLC}},
	volume = {3},
	number = {1},
	author = {Mark D. Wilkinson and Michel Dumontier and IJsbrand Jan Aalbersberg and Gabrielle Appleton and Myles Axton and Arie Baak and Niklas Blomberg and Jan-Willem Boiten and Luiz Bonino da Silva Santos and Philip E. Bourne and Jildau Bouwman and Anthony J. Brookes and Tim Clark and Merc{\`{e}} Crosas and Ingrid Dillo and Olivier Dumon and Scott Edmunds and Chris T. Evelo and Richard Finkers and Alejandra Gonzalez-Beltran and Alasdair J.G. Gray and Paul Groth and Carole Goble and Jeffrey S. Grethe and Jaap Heringa and Peter A.C 't Hoen and Rob Hooft and Tobias Kuhn and Ruben Kok and Joost Kok and Scott J. Lusher and Maryann E. Martone and Albert Mons and Abel L. Packer and Bengt Persson and Philippe Rocca-Serra and Marco Roos and Rene van Schaik and Susanna-Assunta Sansone and Erik Schultes and Thierry Sengstag and Ted Slater and George Strawn and Morris A. Swertz and Mark Thompson and Johan van der Lei and Erik van Mulligen and Jan Velterop and Andra Waagmeester and Peter Wittenburg and Katherine Wolstencroft and Jun Zhao and Barend Mons},
	title = {The {FAIR} Guiding Principles for scientific data management and stewardship},
	journal = {Scientific Data}
}

@misc{opensource:git-binary,
    url = "https://opensource.com/life/16/8/how-manage-binary-blobs-git-part-7",
    title = {How to manage binary blobs with Git},
    author = {Kenlon, Seth},
    year = {2016},
}

@article{Wittkuhn_2021,
	doi = {10.1038/s41467-021-21970-2},
	url = {https://doi.org/10.1038/s41467-021-21970-2},
	year = 2021,
	month = {mar},
	publisher = {Springer Science and Business Media {LLC}},
	volume = {12},
	number = {1},
	author = {Lennart Wittkuhn and Nicolas W. Schuck},
	title = {Dynamics of {fMRI} patterns reflect sub-second activation sequences and reveal replay in human visual cortex},
	journal = {Nature Communications}
}

@article{Ciric_2021,
	doi = {10.21203/rs.3.rs-264855/v1},
	url = {https://doi.org/10.21203/rs.3.rs-264855/v1},
	year = 2021,
	month = {feb},
	publisher = {Research Square},
	author = {Rastko Ciric and Romy Lorenz and William Thompson and Mathias Goncalves and Eilidh MacNicol and Christopher Markiewicz and Yaroslav Halchenko and Satrajit Ghosh and Krzysztof Gorgolewski and Russell Poldrack and Oscar Esteban},
	title = {{TemplateFlow}: a community archive of imaging templates and atlases for improved consistency in neuroimaging}
}

@misc{datasets:LAAC-LSCP,
    url = {https://github.com/LAAC-LSCP/datasets},
    title = {The LAAC superdataset: datasets of infant day-long recordings},
    author={Lucas Gautheron},
    year={2021}
}