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Inquiry on Creating Database Using SGVFinder2 #24

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omluo-creator opened this issue Jul 11, 2024 · 0 comments
Open

Inquiry on Creating Database Using SGVFinder2 #24

omluo-creator opened this issue Jul 11, 2024 · 0 comments

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@omluo-creator
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Hi,I have successfully installed SGVFinder2 and I am now in the process of creating the database using the createdb.py command.The documentation mentions that the files should have extensions such as .fasta, .fa, or .fa.gz. I intend to use the default reference database published with SGVFinder1. I have downloaded the SGVFinder1 configuration file "DataFiles.gz" and extracted it, but I did not find any files with the aforementioned extensions Could you please provide guidance on how I should proceed with using the default reference database for SGVFinder2?

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