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Add ingest button for ingestable files #940

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znatty22 opened this issue Dec 3, 2020 · 0 comments
Open

Add ingest button for ingestable files #940

znatty22 opened this issue Dec 3, 2020 · 0 comments
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feature New functionality

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@znatty22
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znatty22 commented Dec 3, 2020

Feature Justification

Once a study's source sequencing files have been registered in Dataservice, the Bix team runs their genomic harmonization workflows on these files and produces a manifest containing metadata about the harmonized files. Right now data analysts manually parse the information in this manifest and register it in the Dataservice.

This feature will provide a simple way for admins to ingest genomic workflow output manifest(s) for a particular study so that the data in the manifest(s) is registered in the Dataservice.

Proposed Change or Addition

Add an Ingest button to the file detail view if the user has add_ingestrun permission and the file type (currently only GWO) is eligible for automatic ingest. Upon click, post a start ingest run mutation to study creator to ingest the file.

@znatty22 znatty22 added the feature New functionality label Dec 3, 2020
@znatty22 znatty22 self-assigned this Dec 3, 2020
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