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Once a study's source sequencing files have been registered in Dataservice, the Bix team runs their genomic harmonization workflows on these files and produces a manifest containing metadata about the harmonized files. Right now data analysts manually parse the information in this manifest and register it in the Dataservice.
This feature will provide a simple way for admins to ingest genomic workflow output manifest(s) for a particular study so that the data in the manifest(s) is registered in the Dataservice.
Proposed Change or Addition
Add an Ingest button to the file detail view if the user has add_ingestrun permission and the file type (currently only GWO) is eligible for automatic ingest. Upon click, post a start ingest run mutation to study creator to ingest the file.
The text was updated successfully, but these errors were encountered:
Feature Justification
Once a study's source sequencing files have been registered in Dataservice, the Bix team runs their genomic harmonization workflows on these files and produces a manifest containing metadata about the harmonized files. Right now data analysts manually parse the information in this manifest and register it in the Dataservice.
This feature will provide a simple way for admins to ingest genomic workflow output manifest(s) for a particular study so that the data in the manifest(s) is registered in the Dataservice.
Proposed Change or Addition
Add an
Ingest
button to the file detail view if the user hasadd_ingestrun
permission and the file type (currently onlyGWO
) is eligible for automatic ingest. Upon click, post a start ingest run mutation to study creator to ingest the file.The text was updated successfully, but these errors were encountered: