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Update README.md
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jvivian authored May 21, 2019
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Expand Up @@ -18,10 +18,15 @@ Attempting to benchmark different fastq-pairing methods to identify trade-offs b
- [ ] Seek-Iter-Both

## Benchmarked
- [ ] Store-Read
- [ ] Iter-Both
- [ ] Seek-Read
- [ ] Seek-Iter-Both
Here are benchmarks on a pair of ~6GB fastq files where one had 10% of reads shuffled relative to the second file

| Method | Time (m) | Memory (G) |
|------------|----------|------------|
| EdwardsLab | 9.9 | 16 |
| Store | 2.1 | 7.5 |
| Seek | 4.25 | 1.9 |
| Iter | 1.45 | 0.0 |


## Additional features
- [ ] BAM input
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