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Copy file name to clipboardexpand all lines: _pages/plugins/comsystanj.md
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## About ComsystanJ
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ComsystanJ (Complex Systems Analysis for ImageJ) is a collection of ImageJ2/Fiji plugins to compute the complexity, fractal dimension and other nonlinear measures of 1D signals, 2D images and 3D image volumes. It is recommended to use it with Fiji. Developed and maintained by Helmut Ahammer.
- Auto crop borders, Filter, Noise, Particles to stack, Segmentation - RGB Relative, Surrogates
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### Complexity analyses
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- Kolmogorov complexity and Logical Depth
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### Entropy analyses
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- Generalised entropies
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### Fractal analyses
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- Box counting dimension, Correlation dimension, Fractal correlation dimension, Directional correlation dimension, FFT dimension, Link to FracLac, Fractal fragmentation indices, Generalised dimensions, Higuchi dimension 1D, Higuchi dimension 2D, Lacunarity, Mass radius dimension, Minkowski dimension, Perimeter area dimension, Pyramid dimension, Succolarity, Tug of war dimension, Walking divider dimension
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## 3D Image volume
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- Image volume opener, Image volume Generator
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### 3D Preprocessing
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- 3D Filter, 3D Noise, 3D Surrogates
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### 3D Complexity analyses
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- 3D Kolmogorov complexity and Logical Depth
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### 3D Entropy analyses
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- 3D Generalised entropies
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### 3D Fractal analyses
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- 3D Box counting Dimension, 3D Correlation dimension, 3D FFT dimension, 3D Fractal fragmentation indices, 3D Generalised dimensions, 3D Higuchi dimension, 3D Lacunarity, 3D Minkowski dimension, 3D Succolarity, 3D Tug of war dimension
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## Downloads
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You can download ComsystanJ [here](https://github.com/comsystan/comsystanj/releases)
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## Installation
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Copy the ComsystanJ-x.x.x.jar file to the Fiji’s plugins folder.
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Copy the ComsystanJ-x.x.x.jar file to the Fiji’s plugins folder. Delete the old ComsystanJ jar file if it exists.
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