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Freya Arthen edited this page Oct 8, 2021 · 14 revisions

Commands overview

# clone the repository
git clone https://github.com/fdhubert/MILTS.git
# setup of conda environment 'milts'
. ./setup_conda.sh
# running MILTS locally with config file 'config.yml'
./MILTS.sh config.yml
# running MILTS on cluster with config file 'config.yml'
sbatch MILTS.slurm 'config.yml'
# running MILTS on cluster with seedfile.txt containing paths to config files
sbatch MILTS.slurm -s seedfile.txt
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