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type-1B","family":"TKL_STKR","name":"BMPR1B","ensp":"ENSP00000264568"} diff --git a/data/predictions/BRAF/BRAF_logo_bits.pdf b/data/predictions/BRAF/BRAF_logo_bits.pdf index be73302..c39638f 100644 Binary files a/data/predictions/BRAF/BRAF_logo_bits.pdf and b/data/predictions/BRAF/BRAF_logo_bits.pdf differ diff --git a/data/predictions/BRAF/BRAF_logo_bits.png b/data/predictions/BRAF/BRAF_logo_bits.png index 0edbcdc..391cb88 100644 Binary files a/data/predictions/BRAF/BRAF_logo_bits.png and b/data/predictions/BRAF/BRAF_logo_bits.png differ diff --git a/data/predictions/BRAF/BRAF_logo_prob.pdf b/data/predictions/BRAF/BRAF_logo_prob.pdf index 45a2065..8e5489d 100644 Binary files a/data/predictions/BRAF/BRAF_logo_prob.pdf and b/data/predictions/BRAF/BRAF_logo_prob.pdf differ diff --git a/data/predictions/BRAF/BRAF_logo_prob.png b/data/predictions/BRAF/BRAF_logo_prob.png index 51bb393..1b105cc 100644 Binary files a/data/predictions/BRAF/BRAF_logo_prob.png and 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kinase","name":"BRSK2","ensp":"ENSP00000310697"} +{"rm_p":"Yes","npartners_with_sites":24,"npartners":28,"central_res":"ST","nsites":45,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase BRSK2","family":"CAMK_CAMKL","name":"BRSK2","ensp":"ENSP00000310697"} diff --git a/data/predictions/BTK/BTK_logo_bits.pdf b/data/predictions/BTK/BTK_logo_bits.pdf index 8270927..84aea7c 100644 Binary files a/data/predictions/BTK/BTK_logo_bits.pdf and b/data/predictions/BTK/BTK_logo_bits.pdf differ diff --git a/data/predictions/BTK/BTK_logo_bits.png b/data/predictions/BTK/BTK_logo_bits.png index a0eb678..3d5b3a8 100644 Binary files a/data/predictions/BTK/BTK_logo_bits.png and b/data/predictions/BTK/BTK_logo_bits.png differ diff --git a/data/predictions/BTK/BTK_logo_prob.pdf b/data/predictions/BTK/BTK_logo_prob.pdf index b1d42bf..915b166 100644 Binary files a/data/predictions/BTK/BTK_logo_prob.pdf and b/data/predictions/BTK/BTK_logo_prob.pdf differ diff --git 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-{"rm_p":"Yes","npartners_with_sites":335,"npartners":389,"central_res":"ST","nsites":156,"type":"Serine/threonine kinase","name":"BUB1","ensp":"ENSP00000302530"} +{"rm_p":"Yes","npartners_with_sites":335,"npartners":389,"central_res":"ST","nsites":156,"type":"Serine/threonine kinase","desc":"Mitotic checkpoint serine/threonine-protein kinase BUB1","family":"Other_BUB","name":"BUB1","ensp":"ENSP00000302530"} diff --git a/data/predictions/CAMK1/CAMK1_logo_bits.pdf b/data/predictions/CAMK1/CAMK1_logo_bits.pdf index 221a017..6579c0b 100644 Binary files a/data/predictions/CAMK1/CAMK1_logo_bits.pdf and b/data/predictions/CAMK1/CAMK1_logo_bits.pdf differ diff --git a/data/predictions/CAMK1/CAMK1_logo_bits.png b/data/predictions/CAMK1/CAMK1_logo_bits.png index 66c9db0..60e95ca 100644 Binary files a/data/predictions/CAMK1/CAMK1_logo_bits.png and b/data/predictions/CAMK1/CAMK1_logo_bits.png differ diff --git a/data/predictions/CAMK1/CAMK1_logo_prob.pdf 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1","family":"CAMK_CAMK1","name":"CAMK1","ensp":"ENSP00000256460"} diff --git a/data/predictions/CAMK1D/CAMK1D_logo_bits.pdf b/data/predictions/CAMK1D/CAMK1D_logo_bits.pdf index 946c22f..328e6c6 100644 Binary files a/data/predictions/CAMK1D/CAMK1D_logo_bits.pdf and b/data/predictions/CAMK1D/CAMK1D_logo_bits.pdf differ diff --git a/data/predictions/CAMK1D/CAMK1D_logo_bits.png b/data/predictions/CAMK1D/CAMK1D_logo_bits.png index b7c6bc8..dfd93bf 100644 Binary files a/data/predictions/CAMK1D/CAMK1D_logo_bits.png and b/data/predictions/CAMK1D/CAMK1D_logo_bits.png differ diff --git a/data/predictions/CAMK1D/CAMK1D_logo_prob.pdf b/data/predictions/CAMK1D/CAMK1D_logo_prob.pdf index c317af9..f2f0663 100644 Binary files a/data/predictions/CAMK1D/CAMK1D_logo_prob.pdf and b/data/predictions/CAMK1D/CAMK1D_logo_prob.pdf differ diff --git a/data/predictions/CAMK1D/CAMK1D_logo_prob.png b/data/predictions/CAMK1D/CAMK1D_logo_prob.png index e4b7a92..22afa40 100644 Binary files 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-{"rm_p":"Yes","npartners_with_sites":91,"npartners":100,"central_res":"ST","nsites":114,"type":"Serine/threonine kinase","name":"CAMK2A","ensp":"ENSP00000381412"} +{"rm_p":"Yes","npartners_with_sites":91,"npartners":100,"central_res":"ST","nsites":114,"type":"Serine/threonine kinase","desc":"Calcium/calmodulin-dependent protein kinase type II subunit alpha","family":"CAMK_CAMK2","name":"CAMK2A","ensp":"ENSP00000381412"} diff --git a/data/predictions/CAMK2B/CAMK2B_logo_bits.pdf b/data/predictions/CAMK2B/CAMK2B_logo_bits.pdf index f620972..1ec5108 100644 Binary files a/data/predictions/CAMK2B/CAMK2B_logo_bits.pdf and b/data/predictions/CAMK2B/CAMK2B_logo_bits.pdf differ diff --git a/data/predictions/CAMK2B/CAMK2B_logo_bits.png b/data/predictions/CAMK2B/CAMK2B_logo_bits.png index 6546c02..7d5725e 100644 Binary files a/data/predictions/CAMK2B/CAMK2B_logo_bits.png and b/data/predictions/CAMK2B/CAMK2B_logo_bits.png differ diff --git a/data/predictions/CAMK2B/CAMK2B_logo_prob.pdf 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kinase type II subunit beta","family":"CAMK_CAMK2","name":"CAMK2B","ensp":"ENSP00000258682"} diff --git a/data/predictions/CAMK2D/CAMK2D_logo_bits.pdf b/data/predictions/CAMK2D/CAMK2D_logo_bits.pdf index fbf8edf..d202809 100644 Binary files a/data/predictions/CAMK2D/CAMK2D_logo_bits.pdf and b/data/predictions/CAMK2D/CAMK2D_logo_bits.pdf differ diff --git a/data/predictions/CAMK2D/CAMK2D_logo_bits.png b/data/predictions/CAMK2D/CAMK2D_logo_bits.png index be6bb1e..377b214 100644 Binary files a/data/predictions/CAMK2D/CAMK2D_logo_bits.png and b/data/predictions/CAMK2D/CAMK2D_logo_bits.png differ diff --git a/data/predictions/CAMK2D/CAMK2D_logo_prob.pdf b/data/predictions/CAMK2D/CAMK2D_logo_prob.pdf index 8272825..d6565dc 100644 Binary files a/data/predictions/CAMK2D/CAMK2D_logo_prob.pdf and b/data/predictions/CAMK2D/CAMK2D_logo_prob.pdf differ diff --git a/data/predictions/CAMK2D/CAMK2D_logo_prob.png b/data/predictions/CAMK2D/CAMK2D_logo_prob.png index 2493674..fa8a89d 100644 Binary files a/data/predictions/CAMK2D/CAMK2D_logo_prob.png and b/data/predictions/CAMK2D/CAMK2D_logo_prob.png differ diff --git a/data/predictions/CAMK2D/metadata.json b/data/predictions/CAMK2D/metadata.json index 6f67554..00a0e6b 100644 --- a/data/predictions/CAMK2D/metadata.json +++ b/data/predictions/CAMK2D/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":70,"npartners":75,"central_res":"ST","nsites":164,"type":"Serine/threonine kinase","name":"CAMK2D","ensp":"ENSP00000339740"} +{"rm_p":"Yes","npartners_with_sites":70,"npartners":75,"central_res":"ST","nsites":164,"type":"Serine/threonine kinase","desc":"Calcium/calmodulin-dependent protein kinase type II subunit delta","family":"CAMK_CAMK2","name":"CAMK2D","ensp":"ENSP00000339740"} diff --git a/data/predictions/CAMK2G/CAMK2G_logo_bits.pdf b/data/predictions/CAMK2G/CAMK2G_logo_bits.pdf index f1db84c..2220cb1 100644 Binary files a/data/predictions/CAMK2G/CAMK2G_logo_bits.pdf and b/data/predictions/CAMK2G/CAMK2G_logo_bits.pdf differ diff --git a/data/predictions/CAMK2G/CAMK2G_logo_bits.png b/data/predictions/CAMK2G/CAMK2G_logo_bits.png index 1c205f4..02827f9 100644 Binary files a/data/predictions/CAMK2G/CAMK2G_logo_bits.png and b/data/predictions/CAMK2G/CAMK2G_logo_bits.png differ diff --git a/data/predictions/CAMK2G/CAMK2G_logo_prob.pdf b/data/predictions/CAMK2G/CAMK2G_logo_prob.pdf index ac53b38..ead7d57 100644 Binary files a/data/predictions/CAMK2G/CAMK2G_logo_prob.pdf and b/data/predictions/CAMK2G/CAMK2G_logo_prob.pdf differ diff --git a/data/predictions/CAMK2G/CAMK2G_logo_prob.png b/data/predictions/CAMK2G/CAMK2G_logo_prob.png index 43aaf2e..20bb044 100644 Binary files a/data/predictions/CAMK2G/CAMK2G_logo_prob.png and b/data/predictions/CAMK2G/CAMK2G_logo_prob.png differ diff --git a/data/predictions/CAMK2G/metadata.json b/data/predictions/CAMK2G/metadata.json index bf9746e..c154b20 100644 --- a/data/predictions/CAMK2G/metadata.json +++ b/data/predictions/CAMK2G/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":96,"npartners":106,"central_res":"ST","nsites":117,"type":"Serine/threonine kinase","name":"CAMK2G","ensp":"ENSP00000319060"} +{"rm_p":"Yes","npartners_with_sites":96,"npartners":106,"central_res":"ST","nsites":117,"type":"Serine/threonine kinase","desc":"Calcium/calmodulin-dependent protein kinase type II subunit gamma","family":"CAMK_CAMK2","name":"CAMK2G","ensp":"ENSP00000319060"} diff --git a/data/predictions/CAMK4/CAMK4_logo_bits.pdf b/data/predictions/CAMK4/CAMK4_logo_bits.pdf index c4d387a..ec72b13 100644 Binary files a/data/predictions/CAMK4/CAMK4_logo_bits.pdf and b/data/predictions/CAMK4/CAMK4_logo_bits.pdf differ diff --git a/data/predictions/CAMK4/CAMK4_logo_bits.png b/data/predictions/CAMK4/CAMK4_logo_bits.png index c1d2b0c..d55e900 100644 Binary files a/data/predictions/CAMK4/CAMK4_logo_bits.png and b/data/predictions/CAMK4/CAMK4_logo_bits.png differ diff --git a/data/predictions/CAMK4/CAMK4_logo_prob.pdf b/data/predictions/CAMK4/CAMK4_logo_prob.pdf index c5d34ad..9d68fc6 100644 Binary files a/data/predictions/CAMK4/CAMK4_logo_prob.pdf and b/data/predictions/CAMK4/CAMK4_logo_prob.pdf differ diff --git a/data/predictions/CAMK4/CAMK4_logo_prob.png b/data/predictions/CAMK4/CAMK4_logo_prob.png index 8ea5516..fa8fa96 100644 Binary files a/data/predictions/CAMK4/CAMK4_logo_prob.png and b/data/predictions/CAMK4/CAMK4_logo_prob.png differ diff --git a/data/predictions/CAMK4/metadata.json b/data/predictions/CAMK4/metadata.json index 29c9368..348c799 100644 --- a/data/predictions/CAMK4/metadata.json +++ b/data/predictions/CAMK4/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":33,"npartners":40,"central_res":"ST","nsites":52,"type":"Serine/threonine kinase","name":"CAMK4","ensp":"ENSP00000282356"} +{"rm_p":"Yes","npartners_with_sites":33,"npartners":40,"central_res":"ST","nsites":52,"type":"Serine/threonine kinase","desc":"Calcium/calmodulin-dependent protein kinase type IV","family":"CAMK_CAMK1","name":"CAMK4","ensp":"ENSP00000282356"} diff --git a/data/predictions/CAMKK1/CAMKK1_data.tsv b/data/predictions/CAMKK1/CAMKK1_data.tsv deleted file mode 100644 index 8ff7ff5..0000000 --- a/data/predictions/CAMKK1/CAMKK1_data.tsv +++ /dev/null @@ -1,46 +0,0 @@ -name CAMKK1 -id ENSP00000158166 -type Serine/threonine kinase -proline+1_removed Yes -npartners 20 -npartners_with_sites 16 -nsites 34 -// -motif score fg_matches fg_size bg_matches bg_size fold_increase -.....[ST]...S. 6.1 32 130 922 9422 2.52 -// -prot_id prot_name position flank kinase source string_score -ENSP00000270202 AKT1 122 EMDFRSGSPSD hprd;pelm;psite 660 -ENSP00000270202 AKT1 473 HFPQFSYSASG ILK;LRRK2;MAPKAPK2;MTOR;PDK1;PDPK1;PIKFYVE;PRKCA;PRKCB;PRKD1;PRKDC;TBK1 hprd;pelm;psite 660 -ENSP00000346148 PRKAA1 187 ADFGLSNMMSD psite 807 -ENSP00000346148 PRKAA1 198 GEFLRTSCGSP BRSK1;BRSK2;CAMK2B;CAMKK1;CAMKK2;PRKAA1;STK11 hprd;pelm;psite 807 -ENSP00000346148 PRKAA1 497 IDDEITEAKSG hprd;pelm;psite 807 -ENSP00000346148 PRKAA1 509 ATPQRSGSVSN PRKAA1 psite 807 -ENSP00000346148 PRKAA1 513 RSGSVSNYRSC psite 807 -ENSP00000346148 PRKAA1 538 EVSLTSSVTSL hprd;psite 807 -ENSP00000346148 PRKAA1 542 TSSVTSLDSSP hprd;psite 807 -ENSP00000360290 PRKAA2 161 ADFGLSNMMSD psite 804 -ENSP00000360290 PRKAA2 172 GEFLRTSCGSP MAP3K7 hprd;pelm;psite 804 -ENSP00000360290 PRKAA2 500 LHRPRSSFDST hprd;psite 804 -ENSP00000229328 PRKAB1 177 KCSDVSELSSS PRKAA1 psite 837 -ENSP00000254101 PRKAB2 40 IMVGSTDDPSV hprd;psite 837 -ENSP00000254101 PRKAB2 173 LDSMESSETSC hprd;psite 837 -ENSP00000287878 PRKAG2 86 PQPRPSSPMSA psite 862 -ENSP00000287878 PRKAG2 97 PVRPKTSPGSP psite 862 -ENSP00000287878 PRKAG2 131 IFRSSSKESSP psite 862 -ENSP00000287878 PRKAG2 153 RFFSRSRKTSG psite 862 -ENSP00000287878 PRKAG2 156 SRSRKTSGLSS psite 862 -ENSP00000287878 PRKAG2 157 RSRKTSGLSSS hprd;pelm;psite 862 -ENSP00000287878 PRKAG2 160 KTSGLSSSPST psite 862 -ENSP00000287878 PRKAG2 309 APLWESKKQSF psite 862 -ENSP00000368124 CAMK1D 326 KLHLGSSLDSS psite 678 -ENSP00000368124 CAMK1D 327 LHLGSSLDSSN psite 678 -ENSP00000282356 CAMK4 12 PSCSASSCSSV CAMKK1 psite 729 -ENSP00000282356 CAMK4 341 SSRLGSASSSH CAMK4 hprd;pelm;psite 729 -ENSP00000282356 CAMK4 356 ESHKASRDPSP hprd;psite 729 -ENSP00000262300 PKMYT1 454 TVGSTSTPRSR hprd;psite 470 -ENSP00000262300 PKMYT1 469 DALDLSDINSE hprd;pelm;psite 470 -ENSP00000356832 SGK1 492 EPVPNSIGKSP hprd;psite 621 -ENSP00000248975 YWHAH 215 TLNEDSYKDST hprd 621 -ENSP00000262300 PKMYT1 60 PPAKGSIPISR hprd 470 -ENSP00000287878 PRKAG2 130 GIFRSSSKESS hprd 862 diff --git a/data/predictions/CAMKK1/CAMKK1_logo_bits.png b/data/predictions/CAMKK1/CAMKK1_logo_bits.png deleted file mode 100644 index aca9333..0000000 Binary files a/data/predictions/CAMKK1/CAMKK1_logo_bits.png and /dev/null differ diff --git a/data/predictions/CAMKK1/CAMKK1_logo_prob.png b/data/predictions/CAMKK1/CAMKK1_logo_prob.png deleted file mode 100644 index aaa367c..0000000 Binary files a/data/predictions/CAMKK1/CAMKK1_logo_prob.png and /dev/null differ diff --git a/data/predictions/CAMKK1/metadata.json b/data/predictions/CAMKK1/metadata.json deleted file mode 100644 index 447c5b0..0000000 --- a/data/predictions/CAMKK1/metadata.json +++ /dev/null @@ -1 +0,0 @@ -{"rm_p":"Yes","npartners_with_sites":16,"npartners":20,"central_res":"ST","nsites":34,"type":"Serine/threonine kinase","name":"CAMKK1","ensp":"ENSP00000158166"} diff --git a/data/predictions/CAMKK1/motifs.json b/data/predictions/CAMKK1/motifs.json deleted file mode 100644 index 3ec7cb6..0000000 --- a/data/predictions/CAMKK1/motifs.json +++ /dev/null @@ -1 +0,0 @@ -[{"motif":".....[ST]...S.","score":6.1,"fg_matches":32,"fg_size":130,"bg_matches":922,"bg_size":9422,"fold_increase":2.52}] diff --git a/data/predictions/CAMKK1/sites.json b/data/predictions/CAMKK1/sites.json deleted file mode 100644 index 3dcaf86..0000000 --- a/data/predictions/CAMKK1/sites.json +++ /dev/null @@ -1 +0,0 @@ -[{"prot_id":"ENSP00000270202","prot_name":"AKT1","position":122,"flank":"EMDFRSGSPSD","kinase":"","source":"hprd;pelm;psite","string_score":660},{"prot_id":"ENSP00000270202","prot_name":"AKT1","position":473,"flank":"HFPQFSYSASG","kinase":"ILK;LRRK2;MAPKAPK2;MTOR;PDK1;PDPK1;PIKFYVE;PRKCA;PRKCB;PRKD1;PRKDC;TBK1","source":"hprd;pelm;psite","string_score":660},{"prot_id":"ENSP00000346148","prot_name":"PRKAA1","position":187,"flank":"ADFGLSNMMSD","kinase":"","source":"psite","string_score":807},{"prot_id":"ENSP00000346148","prot_name":"PRKAA1","position":198,"flank":"GEFLRTSCGSP","kinase":"BRSK1;BRSK2;CAMK2B;CAMKK1;CAMKK2;PRKAA1;STK11","source":"hprd;pelm;psite","string_score":807},{"prot_id":"ENSP00000346148","prot_name":"PRKAA1","position":497,"flank":"IDDEITEAKSG","kinase":"","source":"hprd;pelm;psite","string_score":807},{"prot_id":"ENSP00000346148","prot_name":"PRKAA1","position":509,"flank":"ATPQRSGSVSN","kinase":"PRKAA1","source":"psite","string_score":807},{"prot_id":"ENSP00000346148","prot_name":"PRKAA1","position":513,"flank":"RSGSVSNYRSC","kinase":"","source":"psite","string_score":807},{"prot_id":"ENSP00000346148","prot_name":"PRKAA1","position":538,"flank":"EVSLTSSVTSL","kinase":"","source":"hprd;psite","string_score":807},{"prot_id":"ENSP00000346148","prot_name":"PRKAA1","position":542,"flank":"TSSVTSLDSSP","kinase":"","source":"hprd;psite","string_score":807},{"prot_id":"ENSP00000360290","prot_name":"PRKAA2","position":161,"flank":"ADFGLSNMMSD","kinase":"","source":"psite","string_score":804},{"prot_id":"ENSP00000360290","prot_name":"PRKAA2","position":172,"flank":"GEFLRTSCGSP","kinase":"MAP3K7","source":"hprd;pelm;psite","string_score":804},{"prot_id":"ENSP00000360290","prot_name":"PRKAA2","position":500,"flank":"LHRPRSSFDST","kinase":"","source":"hprd;psite","string_score":804},{"prot_id":"ENSP00000229328","prot_name":"PRKAB1","position":177,"flank":"KCSDVSELSSS","kinase":"PRKAA1","source":"psite","string_score":837},{"prot_id":"ENSP00000254101","prot_name":"PRKAB2","position":40,"flank":"IMVGSTDDPSV","kinase":"","source":"hprd;psite","string_score":837},{"prot_id":"ENSP00000254101","prot_name":"PRKAB2","position":173,"flank":"LDSMESSETSC","kinase":"","source":"hprd;psite","string_score":837},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":86,"flank":"PQPRPSSPMSA","kinase":"","source":"psite","string_score":862},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":97,"flank":"PVRPKTSPGSP","kinase":"","source":"psite","string_score":862},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":131,"flank":"IFRSSSKESSP","kinase":"","source":"psite","string_score":862},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":153,"flank":"RFFSRSRKTSG","kinase":"","source":"psite","string_score":862},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":156,"flank":"SRSRKTSGLSS","kinase":"","source":"psite","string_score":862},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":157,"flank":"RSRKTSGLSSS","kinase":"","source":"hprd;pelm;psite","string_score":862},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":160,"flank":"KTSGLSSSPST","kinase":"","source":"psite","string_score":862},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":309,"flank":"APLWESKKQSF","kinase":"","source":"psite","string_score":862},{"prot_id":"ENSP00000368124","prot_name":"CAMK1D","position":326,"flank":"KLHLGSSLDSS","kinase":"","source":"psite","string_score":678},{"prot_id":"ENSP00000368124","prot_name":"CAMK1D","position":327,"flank":"LHLGSSLDSSN","kinase":"","source":"psite","string_score":678},{"prot_id":"ENSP00000282356","prot_name":"CAMK4","position":12,"flank":"PSCSASSCSSV","kinase":"CAMKK1","source":"psite","string_score":729},{"prot_id":"ENSP00000282356","prot_name":"CAMK4","position":341,"flank":"SSRLGSASSSH","kinase":"CAMK4","source":"hprd;pelm;psite","string_score":729},{"prot_id":"ENSP00000282356","prot_name":"CAMK4","position":356,"flank":"ESHKASRDPSP","kinase":"","source":"hprd;psite","string_score":729},{"prot_id":"ENSP00000262300","prot_name":"PKMYT1","position":454,"flank":"TVGSTSTPRSR","kinase":"","source":"hprd;psite","string_score":470},{"prot_id":"ENSP00000262300","prot_name":"PKMYT1","position":469,"flank":"DALDLSDINSE","kinase":"","source":"hprd;pelm;psite","string_score":470},{"prot_id":"ENSP00000356832","prot_name":"SGK1","position":492,"flank":"EPVPNSIGKSP","kinase":"","source":"hprd;psite","string_score":621},{"prot_id":"ENSP00000248975","prot_name":"YWHAH","position":215,"flank":"TLNEDSYKDST","kinase":"","source":"hprd","string_score":621},{"prot_id":"ENSP00000262300","prot_name":"PKMYT1","position":60,"flank":"PPAKGSIPISR","kinase":"","source":"hprd","string_score":470},{"prot_id":"ENSP00000287878","prot_name":"PRKAG2","position":130,"flank":"GIFRSSSKESS","kinase":"","source":"hprd","string_score":862}] diff --git a/data/predictions/CAMKK2/CAMKK2_logo_bits.pdf b/data/predictions/CAMKK2/CAMKK2_logo_bits.pdf index 2b4d396..1b79aca 100644 Binary files a/data/predictions/CAMKK2/CAMKK2_logo_bits.pdf and b/data/predictions/CAMKK2/CAMKK2_logo_bits.pdf differ diff --git a/data/predictions/CAMKK2/CAMKK2_logo_bits.png b/data/predictions/CAMKK2/CAMKK2_logo_bits.png index c020b2e..3a067a0 100644 Binary files a/data/predictions/CAMKK2/CAMKK2_logo_bits.png and b/data/predictions/CAMKK2/CAMKK2_logo_bits.png differ diff --git a/data/predictions/CAMKK2/CAMKK2_logo_prob.pdf b/data/predictions/CAMKK2/CAMKK2_logo_prob.pdf index 3d0261c..f083035 100644 Binary files a/data/predictions/CAMKK2/CAMKK2_logo_prob.pdf and b/data/predictions/CAMKK2/CAMKK2_logo_prob.pdf differ diff --git a/data/predictions/CAMKK2/CAMKK2_logo_prob.png b/data/predictions/CAMKK2/CAMKK2_logo_prob.png index 991fff3..280fbcd 100644 Binary files a/data/predictions/CAMKK2/CAMKK2_logo_prob.png and b/data/predictions/CAMKK2/CAMKK2_logo_prob.png differ diff --git a/data/predictions/CAMKK2/metadata.json b/data/predictions/CAMKK2/metadata.json index dfe93a9..5d05351 100644 --- a/data/predictions/CAMKK2/metadata.json +++ b/data/predictions/CAMKK2/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":30,"npartners":34,"central_res":"ST","nsites":40,"type":"Serine/threonine kinase","name":"CAMKK2","ensp":"ENSP00000312741"} +{"rm_p":"Yes","npartners_with_sites":30,"npartners":34,"central_res":"ST","nsites":40,"type":"Serine/threonine kinase","desc":"Calcium/calmodulin-dependent protein kinase kinase 2","family":"Other_CAMKK","name":"CAMKK2","ensp":"ENSP00000312741"} diff --git a/data/predictions/CASK/CASK_logo_bits.pdf b/data/predictions/CASK/CASK_logo_bits.pdf index 7da6899..bd5f641 100644 Binary files a/data/predictions/CASK/CASK_logo_bits.pdf and b/data/predictions/CASK/CASK_logo_bits.pdf differ diff --git a/data/predictions/CASK/CASK_logo_bits.png b/data/predictions/CASK/CASK_logo_bits.png index 47c1671..7b8cd24 100644 Binary files a/data/predictions/CASK/CASK_logo_bits.png and b/data/predictions/CASK/CASK_logo_bits.png differ diff --git a/data/predictions/CASK/CASK_logo_prob.pdf b/data/predictions/CASK/CASK_logo_prob.pdf index f687c15..80b5495 100644 Binary files a/data/predictions/CASK/CASK_logo_prob.pdf and b/data/predictions/CASK/CASK_logo_prob.pdf differ diff --git a/data/predictions/CASK/CASK_logo_prob.png b/data/predictions/CASK/CASK_logo_prob.png index 421585f..b1604a1 100644 Binary files a/data/predictions/CASK/CASK_logo_prob.png and b/data/predictions/CASK/CASK_logo_prob.png differ diff --git a/data/predictions/CASK/metadata.json b/data/predictions/CASK/metadata.json index 845cda1..df04e98 100644 --- a/data/predictions/CASK/metadata.json +++ b/data/predictions/CASK/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":185,"npartners":233,"central_res":"ST","nsites":283,"type":"Serine/threonine kinase","name":"CASK","ensp":"ENSP00000367408"} +{"rm_p":"Yes","npartners_with_sites":185,"npartners":233,"central_res":"ST","nsites":283,"type":"Serine/threonine kinase","desc":"Peripheral plasma membrane protein CASK","family":"CAMK_CASK","name":"CASK","ensp":"ENSP00000367408"} diff --git a/data/predictions/CDC7/CDC7_logo_bits.pdf b/data/predictions/CDC7/CDC7_logo_bits.pdf index e251d2d..2a6cf36 100644 Binary files a/data/predictions/CDC7/CDC7_logo_bits.pdf and b/data/predictions/CDC7/CDC7_logo_bits.pdf differ diff --git a/data/predictions/CDC7/CDC7_logo_bits.png b/data/predictions/CDC7/CDC7_logo_bits.png index 6f96af0..524b81c 100644 Binary files a/data/predictions/CDC7/CDC7_logo_bits.png and b/data/predictions/CDC7/CDC7_logo_bits.png differ diff --git a/data/predictions/CDC7/CDC7_logo_prob.pdf b/data/predictions/CDC7/CDC7_logo_prob.pdf index 0c86a4a..7fde5be 100644 Binary files a/data/predictions/CDC7/CDC7_logo_prob.pdf and b/data/predictions/CDC7/CDC7_logo_prob.pdf differ diff 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b/data/predictions/CDK1/metadata.json @@ -1 +1 @@ -{"rm_p":"No","npartners_with_sites":598,"npartners":680,"central_res":"ST","nsites":113,"type":"Serine/threonine kinase","name":"CDK1","ensp":"ENSP00000306043"} +{"rm_p":"No","npartners_with_sites":598,"npartners":680,"central_res":"ST","nsites":113,"type":"Serine/threonine kinase","desc":"Cyclin-dependent kinase 1","family":"CMGC_CDK","name":"CDK1","ensp":"ENSP00000306043"} diff --git a/data/predictions/CDK11A/CDK11A_logo_bits.pdf b/data/predictions/CDK11A/CDK11A_logo_bits.pdf index 2eee267..a2ee3ee 100644 Binary files a/data/predictions/CDK11A/CDK11A_logo_bits.pdf and b/data/predictions/CDK11A/CDK11A_logo_bits.pdf differ diff --git a/data/predictions/CDK11A/CDK11A_logo_bits.png b/data/predictions/CDK11A/CDK11A_logo_bits.png index 87ce5dc..4e47a84 100644 Binary files a/data/predictions/CDK11A/CDK11A_logo_bits.png and b/data/predictions/CDK11A/CDK11A_logo_bits.png differ diff --git a/data/predictions/CDK11A/CDK11A_logo_prob.pdf 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11A","family":"CMGC_CDK","name":"CDK11A","ensp":"ENSP00000384442"} diff --git a/data/predictions/CDK12/CDK12_logo_bits.pdf b/data/predictions/CDK12/CDK12_logo_bits.pdf index 4dbae9e..c4e8908 100644 Binary files a/data/predictions/CDK12/CDK12_logo_bits.pdf and b/data/predictions/CDK12/CDK12_logo_bits.pdf differ diff --git a/data/predictions/CDK12/CDK12_logo_bits.png b/data/predictions/CDK12/CDK12_logo_bits.png index 52a2c37..6ab2f90 100644 Binary files a/data/predictions/CDK12/CDK12_logo_bits.png and b/data/predictions/CDK12/CDK12_logo_bits.png differ diff --git a/data/predictions/CDK12/CDK12_logo_prob.pdf b/data/predictions/CDK12/CDK12_logo_prob.pdf index 330d952..ef69094 100644 Binary files a/data/predictions/CDK12/CDK12_logo_prob.pdf and b/data/predictions/CDK12/CDK12_logo_prob.pdf differ diff --git a/data/predictions/CDK12/CDK12_logo_prob.png b/data/predictions/CDK12/CDK12_logo_prob.png index 9fdbc8b..b705712 100644 Binary files a/data/predictions/CDK12/CDK12_logo_prob.png and 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kinase","name":"CDK13","ensp":"ENSP00000181839"} +{"rm_p":"No","npartners_with_sites":54,"npartners":72,"central_res":"ST","nsites":150,"type":"Serine/threonine kinase","desc":"Cyclin-dependent kinase 13","family":"CMGC_CDK","name":"CDK13","ensp":"ENSP00000181839"} diff --git a/data/predictions/CDK14/CDK14_logo_bits.pdf b/data/predictions/CDK14/CDK14_logo_bits.pdf index 513423e..e139f4d 100644 Binary files a/data/predictions/CDK14/CDK14_logo_bits.pdf and b/data/predictions/CDK14/CDK14_logo_bits.pdf differ diff --git a/data/predictions/CDK14/CDK14_logo_bits.png b/data/predictions/CDK14/CDK14_logo_bits.png index cab9d1e..63e28f6 100644 Binary files a/data/predictions/CDK14/CDK14_logo_bits.png and b/data/predictions/CDK14/CDK14_logo_bits.png differ diff --git a/data/predictions/CDK14/CDK14_logo_prob.pdf b/data/predictions/CDK14/CDK14_logo_prob.pdf index cc3b3da..204f4d9 100644 Binary files a/data/predictions/CDK14/CDK14_logo_prob.pdf and b/data/predictions/CDK14/CDK14_logo_prob.pdf differ 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kinase","name":"CDK20","ensp":"ENSP00000322343"} +{"rm_p":"No","npartners_with_sites":16,"npartners":17,"central_res":"ST","nsites":47,"type":"Serine/threonine kinase","desc":"Cyclin-dependent kinase 20","family":"CMGC_CDK","name":"CDK20","ensp":"ENSP00000322343"} diff --git a/data/predictions/CDK3/CDK3_logo_bits.pdf b/data/predictions/CDK3/CDK3_logo_bits.pdf index 4c2e672..7579626 100644 Binary files a/data/predictions/CDK3/CDK3_logo_bits.pdf and b/data/predictions/CDK3/CDK3_logo_bits.pdf differ diff --git a/data/predictions/CDK3/CDK3_logo_bits.png b/data/predictions/CDK3/CDK3_logo_bits.png index 441485f..07d1328 100644 Binary files a/data/predictions/CDK3/CDK3_logo_bits.png and b/data/predictions/CDK3/CDK3_logo_bits.png differ diff --git a/data/predictions/CDK3/CDK3_logo_prob.pdf b/data/predictions/CDK3/CDK3_logo_prob.pdf index 01fdb68..d6adaec 100644 Binary files a/data/predictions/CDK3/CDK3_logo_prob.pdf and b/data/predictions/CDK3/CDK3_logo_prob.pdf differ diff --git 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-{"rm_p":"No","npartners_with_sites":282,"npartners":333,"central_res":"ST","nsites":135,"type":"Serine/threonine kinase","name":"CDK4","ensp":"ENSP00000257904"} +{"rm_p":"No","npartners_with_sites":282,"npartners":333,"central_res":"ST","nsites":135,"type":"Serine/threonine kinase","desc":"Cyclin-dependent kinase 4","family":"CMGC_CDK","name":"CDK4","ensp":"ENSP00000257904"} diff --git a/data/predictions/CDK5/CDK5_logo_bits.pdf b/data/predictions/CDK5/CDK5_logo_bits.pdf index 5d18e27..9218ce2 100644 Binary files a/data/predictions/CDK5/CDK5_logo_bits.pdf and b/data/predictions/CDK5/CDK5_logo_bits.pdf differ diff --git a/data/predictions/CDK5/CDK5_logo_bits.png b/data/predictions/CDK5/CDK5_logo_bits.png index 0348d3f..005dfc6 100644 Binary files a/data/predictions/CDK5/CDK5_logo_bits.png and b/data/predictions/CDK5/CDK5_logo_bits.png differ diff --git a/data/predictions/CDK5/CDK5_logo_prob.pdf b/data/predictions/CDK5/CDK5_logo_prob.pdf index 8eac387..e547f0b 100644 Binary files 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7","family":"CMGC_CDK","name":"CDK7","ensp":"ENSP00000256443"} diff --git a/data/predictions/CDK8/CDK8_logo_bits.pdf b/data/predictions/CDK8/CDK8_logo_bits.pdf index bc4a149..13c6c90 100644 Binary files a/data/predictions/CDK8/CDK8_logo_bits.pdf and b/data/predictions/CDK8/CDK8_logo_bits.pdf differ diff --git a/data/predictions/CDK8/CDK8_logo_bits.png b/data/predictions/CDK8/CDK8_logo_bits.png index 5056bbb..b0a7d4f 100644 Binary files a/data/predictions/CDK8/CDK8_logo_bits.png and b/data/predictions/CDK8/CDK8_logo_bits.png differ diff --git a/data/predictions/CDK8/CDK8_logo_prob.pdf b/data/predictions/CDK8/CDK8_logo_prob.pdf index 0607005..352a2da 100644 Binary files a/data/predictions/CDK8/CDK8_logo_prob.pdf and b/data/predictions/CDK8/CDK8_logo_prob.pdf differ diff --git a/data/predictions/CDK8/CDK8_logo_prob.png b/data/predictions/CDK8/CDK8_logo_prob.png index 133d037..e454af0 100644 Binary files a/data/predictions/CDK8/CDK8_logo_prob.png and 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+++ b/data/predictions/CHEK1/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":353,"npartners":408,"central_res":"ST","nsites":247,"type":"Serine/threonine kinase","name":"CHEK1","ensp":"ENSP00000278916"} +{"rm_p":"Yes","npartners_with_sites":353,"npartners":408,"central_res":"ST","nsites":247,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase Chk1","family":"CAMK_CAMKL","name":"CHEK1","ensp":"ENSP00000278916"} diff --git a/data/predictions/CHEK2/CHEK2_logo_bits.pdf b/data/predictions/CHEK2/CHEK2_logo_bits.pdf index 062b9e7..4d78802 100644 Binary files a/data/predictions/CHEK2/CHEK2_logo_bits.pdf and b/data/predictions/CHEK2/CHEK2_logo_bits.pdf differ diff --git a/data/predictions/CHEK2/CHEK2_logo_bits.png b/data/predictions/CHEK2/CHEK2_logo_bits.png index 56d2c85..91c1e84 100644 Binary files a/data/predictions/CHEK2/CHEK2_logo_bits.png and b/data/predictions/CHEK2/CHEK2_logo_bits.png differ diff --git a/data/predictions/CHEK2/CHEK2_logo_prob.pdf 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Chk2","family":"CAMK_RAD53","name":"CHEK2","ensp":"ENSP00000372023"} diff --git a/data/predictions/CHUK/CHUK_logo_bits.pdf b/data/predictions/CHUK/CHUK_logo_bits.pdf index 710a5e4..c3b24aa 100644 Binary files a/data/predictions/CHUK/CHUK_logo_bits.pdf and b/data/predictions/CHUK/CHUK_logo_bits.pdf differ diff --git a/data/predictions/CHUK/CHUK_logo_bits.png b/data/predictions/CHUK/CHUK_logo_bits.png index 03fbc26..79c5b30 100644 Binary files a/data/predictions/CHUK/CHUK_logo_bits.png and b/data/predictions/CHUK/CHUK_logo_bits.png differ diff --git a/data/predictions/CHUK/CHUK_logo_prob.pdf b/data/predictions/CHUK/CHUK_logo_prob.pdf index 080f1d6..fa937ec 100644 Binary files a/data/predictions/CHUK/CHUK_logo_prob.pdf and b/data/predictions/CHUK/CHUK_logo_prob.pdf differ diff --git a/data/predictions/CHUK/CHUK_logo_prob.png b/data/predictions/CHUK/CHUK_logo_prob.png index 3fabff0..a224757 100644 Binary files a/data/predictions/CHUK/CHUK_logo_prob.png and 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+{"rm_p":"Yes","npartners_with_sites":50,"npartners":54,"central_res":"ST","nsites":74,"type":"Serine/threonine kinase","desc":"Citron Rho-interacting kinase","family":"AGC_DMPK","name":"CIT","ensp":"ENSP00000261833"} diff --git a/data/predictions/CLK1/CLK1_logo_bits.pdf b/data/predictions/CLK1/CLK1_logo_bits.pdf index 248973a..3c0123e 100644 Binary files a/data/predictions/CLK1/CLK1_logo_bits.pdf and b/data/predictions/CLK1/CLK1_logo_bits.pdf differ diff --git a/data/predictions/CLK1/CLK1_logo_bits.png b/data/predictions/CLK1/CLK1_logo_bits.png index e264ed6..ce4e284 100644 Binary files a/data/predictions/CLK1/CLK1_logo_bits.png and b/data/predictions/CLK1/CLK1_logo_bits.png differ diff --git a/data/predictions/CLK1/CLK1_logo_prob.pdf b/data/predictions/CLK1/CLK1_logo_prob.pdf index bb43118..e3f1a14 100644 Binary files a/data/predictions/CLK1/CLK1_logo_prob.pdf and b/data/predictions/CLK1/CLK1_logo_prob.pdf differ diff --git a/data/predictions/CLK1/CLK1_logo_prob.png 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-{"rm_p":"No","npartners_with_sites":23,"npartners":28,"central_res":"ST","nsites":119,"type":"Serine/threonine kinase","name":"CLK2","ensp":"ENSP00000354856"} +{"rm_p":"No","npartners_with_sites":23,"npartners":28,"central_res":"ST","nsites":119,"type":"Serine/threonine kinase","desc":"Dual specificity protein kinase CLK2","family":"CMGC_CLK","name":"CLK2","ensp":"ENSP00000354856"} diff --git a/data/predictions/CLK4/CLK4_logo_bits.pdf b/data/predictions/CLK4/CLK4_logo_bits.pdf index e7d3a5a..47cee03 100644 Binary files a/data/predictions/CLK4/CLK4_logo_bits.pdf and b/data/predictions/CLK4/CLK4_logo_bits.pdf differ diff --git a/data/predictions/CLK4/CLK4_logo_bits.png b/data/predictions/CLK4/CLK4_logo_bits.png index bb71b45..523a771 100644 Binary files a/data/predictions/CLK4/CLK4_logo_bits.png and b/data/predictions/CLK4/CLK4_logo_bits.png differ diff --git a/data/predictions/CLK4/CLK4_logo_prob.pdf b/data/predictions/CLK4/CLK4_logo_prob.pdf index a07bf7c..e7f2990 100644 Binary files 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b/data/predictions/CSNK1A1L/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":20,"npartners":25,"central_res":"ST","nsites":10,"type":"Serine/threonine kinase","name":"CSNK1A1L","ensp":"ENSP00000369126"} +{"rm_p":"Yes","npartners_with_sites":20,"npartners":25,"central_res":"ST","nsites":10,"type":"Serine/threonine kinase","desc":"Casein kinase I isoform alpha-like","family":"CK1_CK1","name":"CSNK1A1L","ensp":"ENSP00000369126"} diff --git a/data/predictions/CSNK1D/CSNK1D_logo_bits.pdf b/data/predictions/CSNK1D/CSNK1D_logo_bits.pdf index 1f566b1..d9a20d0 100644 Binary files a/data/predictions/CSNK1D/CSNK1D_logo_bits.pdf and b/data/predictions/CSNK1D/CSNK1D_logo_bits.pdf differ diff --git a/data/predictions/CSNK1D/CSNK1D_logo_bits.png b/data/predictions/CSNK1D/CSNK1D_logo_bits.png index 3de4248..650b96e 100644 Binary files a/data/predictions/CSNK1D/CSNK1D_logo_bits.png and b/data/predictions/CSNK1D/CSNK1D_logo_bits.png differ diff --git a/data/predictions/CSNK1D/CSNK1D_logo_prob.pdf b/data/predictions/CSNK1D/CSNK1D_logo_prob.pdf index cc3c237..1149aa6 100644 Binary files a/data/predictions/CSNK1D/CSNK1D_logo_prob.pdf and b/data/predictions/CSNK1D/CSNK1D_logo_prob.pdf differ diff --git a/data/predictions/CSNK1D/CSNK1D_logo_prob.png b/data/predictions/CSNK1D/CSNK1D_logo_prob.png index b37647f..8e1db79 100644 Binary files a/data/predictions/CSNK1D/CSNK1D_logo_prob.png and b/data/predictions/CSNK1D/CSNK1D_logo_prob.png differ diff --git a/data/predictions/CSNK1D/metadata.json b/data/predictions/CSNK1D/metadata.json index 0deed8b..d9d78c1 100644 --- a/data/predictions/CSNK1D/metadata.json +++ b/data/predictions/CSNK1D/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":129,"npartners":149,"central_res":"ST","nsites":635,"type":"Serine/threonine kinase","name":"CSNK1D","ensp":"ENSP00000324464"} +{"rm_p":"Yes","npartners_with_sites":129,"npartners":149,"central_res":"ST","nsites":635,"type":"Serine/threonine kinase","desc":"Casein kinase I isoform delta","family":"CK1_CK1","name":"CSNK1D","ensp":"ENSP00000324464"} diff --git a/data/predictions/CSNK1E/CSNK1E_logo_bits.pdf b/data/predictions/CSNK1E/CSNK1E_logo_bits.pdf index a2bf951..088ffe3 100644 Binary files a/data/predictions/CSNK1E/CSNK1E_logo_bits.pdf and b/data/predictions/CSNK1E/CSNK1E_logo_bits.pdf differ diff --git a/data/predictions/CSNK1E/CSNK1E_logo_bits.png b/data/predictions/CSNK1E/CSNK1E_logo_bits.png index da2b782..c49090e 100644 Binary files a/data/predictions/CSNK1E/CSNK1E_logo_bits.png and b/data/predictions/CSNK1E/CSNK1E_logo_bits.png differ diff --git a/data/predictions/CSNK1E/CSNK1E_logo_prob.pdf b/data/predictions/CSNK1E/CSNK1E_logo_prob.pdf index 2c18eaf..cbfbd0b 100644 Binary files a/data/predictions/CSNK1E/CSNK1E_logo_prob.pdf and b/data/predictions/CSNK1E/CSNK1E_logo_prob.pdf differ diff --git a/data/predictions/CSNK1E/CSNK1E_logo_prob.png b/data/predictions/CSNK1E/CSNK1E_logo_prob.png index 206e1ba..1cc820b 100644 Binary files a/data/predictions/CSNK1E/CSNK1E_logo_prob.png and b/data/predictions/CSNK1E/CSNK1E_logo_prob.png differ diff --git a/data/predictions/CSNK1E/metadata.json b/data/predictions/CSNK1E/metadata.json index a615949..fecd59a 100644 --- a/data/predictions/CSNK1E/metadata.json +++ b/data/predictions/CSNK1E/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":97,"npartners":116,"central_res":"ST","nsites":497,"type":"Serine/threonine kinase","name":"CSNK1E","ensp":"ENSP00000352929"} +{"rm_p":"Yes","npartners_with_sites":97,"npartners":116,"central_res":"ST","nsites":497,"type":"Serine/threonine kinase","desc":"Casein kinase I isoform epsilon","family":"CK1_CK1","name":"CSNK1E","ensp":"ENSP00000352929"} diff --git a/data/predictions/CSNK1G1/CSNK1G1_logo_bits.pdf b/data/predictions/CSNK1G1/CSNK1G1_logo_bits.pdf index d2fff1b..37ab3c4 100644 Binary files a/data/predictions/CSNK1G1/CSNK1G1_logo_bits.pdf and b/data/predictions/CSNK1G1/CSNK1G1_logo_bits.pdf differ diff --git a/data/predictions/CSNK1G1/CSNK1G1_logo_bits.png b/data/predictions/CSNK1G1/CSNK1G1_logo_bits.png index 00a32ef..0c229d8 100644 Binary files a/data/predictions/CSNK1G1/CSNK1G1_logo_bits.png and b/data/predictions/CSNK1G1/CSNK1G1_logo_bits.png differ diff --git a/data/predictions/CSNK1G1/CSNK1G1_logo_prob.pdf b/data/predictions/CSNK1G1/CSNK1G1_logo_prob.pdf index 7afe474..90c6a67 100644 Binary files a/data/predictions/CSNK1G1/CSNK1G1_logo_prob.pdf and b/data/predictions/CSNK1G1/CSNK1G1_logo_prob.pdf differ diff --git a/data/predictions/CSNK1G1/CSNK1G1_logo_prob.png b/data/predictions/CSNK1G1/CSNK1G1_logo_prob.png index 3f0e194..ed90eae 100644 Binary files a/data/predictions/CSNK1G1/CSNK1G1_logo_prob.png and b/data/predictions/CSNK1G1/CSNK1G1_logo_prob.png differ diff --git a/data/predictions/CSNK1G1/metadata.json b/data/predictions/CSNK1G1/metadata.json index de772b7..e332555 100644 --- a/data/predictions/CSNK1G1/metadata.json +++ b/data/predictions/CSNK1G1/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":23,"npartners":25,"central_res":"ST","nsites":13,"type":"Serine/threonine kinase","name":"CSNK1G1","ensp":"ENSP00000305777"} +{"rm_p":"Yes","npartners_with_sites":23,"npartners":25,"central_res":"ST","nsites":13,"type":"Serine/threonine kinase","desc":"Casein kinase I isoform gamma-1","family":"CK1_CK1","name":"CSNK1G1","ensp":"ENSP00000305777"} diff --git a/data/predictions/CSNK1G2/CSNK1G2_logo_bits.pdf b/data/predictions/CSNK1G2/CSNK1G2_logo_bits.pdf index 9cf30f4..0d153c3 100644 Binary files a/data/predictions/CSNK1G2/CSNK1G2_logo_bits.pdf and b/data/predictions/CSNK1G2/CSNK1G2_logo_bits.pdf differ diff --git a/data/predictions/CSNK1G2/CSNK1G2_logo_bits.png b/data/predictions/CSNK1G2/CSNK1G2_logo_bits.png index 003dae4..59aea9f 100644 Binary files a/data/predictions/CSNK1G2/CSNK1G2_logo_bits.png and b/data/predictions/CSNK1G2/CSNK1G2_logo_bits.png differ diff --git a/data/predictions/CSNK1G2/CSNK1G2_logo_prob.pdf b/data/predictions/CSNK1G2/CSNK1G2_logo_prob.pdf index f1f52ff..b718b06 100644 Binary files a/data/predictions/CSNK1G2/CSNK1G2_logo_prob.pdf and b/data/predictions/CSNK1G2/CSNK1G2_logo_prob.pdf differ diff --git a/data/predictions/CSNK1G2/CSNK1G2_logo_prob.png b/data/predictions/CSNK1G2/CSNK1G2_logo_prob.png index 1a39f2b..0c0e39d 100644 Binary files a/data/predictions/CSNK1G2/CSNK1G2_logo_prob.png and b/data/predictions/CSNK1G2/CSNK1G2_logo_prob.png differ diff --git a/data/predictions/CSNK1G2/metadata.json b/data/predictions/CSNK1G2/metadata.json index dda318c..87fe023 100644 --- a/data/predictions/CSNK1G2/metadata.json +++ b/data/predictions/CSNK1G2/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":22,"npartners":23,"central_res":"ST","nsites":12,"type":"Serine/threonine kinase","name":"CSNK1G2","ensp":"ENSP00000255641"} +{"rm_p":"Yes","npartners_with_sites":22,"npartners":23,"central_res":"ST","nsites":12,"type":"Serine/threonine kinase","desc":"Casein kinase I isoform gamma-2","family":"CK1_CK1","name":"CSNK1G2","ensp":"ENSP00000255641"} diff --git a/data/predictions/CSNK1G3/CSNK1G3_logo_bits.pdf b/data/predictions/CSNK1G3/CSNK1G3_logo_bits.pdf index 6150c83..dafe73a 100644 Binary files a/data/predictions/CSNK1G3/CSNK1G3_logo_bits.pdf and b/data/predictions/CSNK1G3/CSNK1G3_logo_bits.pdf differ diff --git a/data/predictions/CSNK1G3/CSNK1G3_logo_bits.png b/data/predictions/CSNK1G3/CSNK1G3_logo_bits.png index 8072e2b..a12f96e 100644 Binary files a/data/predictions/CSNK1G3/CSNK1G3_logo_bits.png and b/data/predictions/CSNK1G3/CSNK1G3_logo_bits.png differ diff --git a/data/predictions/CSNK1G3/CSNK1G3_logo_prob.pdf b/data/predictions/CSNK1G3/CSNK1G3_logo_prob.pdf index a17de20..87166ac 100644 Binary files a/data/predictions/CSNK1G3/CSNK1G3_logo_prob.pdf and b/data/predictions/CSNK1G3/CSNK1G3_logo_prob.pdf differ diff --git a/data/predictions/CSNK1G3/CSNK1G3_logo_prob.png b/data/predictions/CSNK1G3/CSNK1G3_logo_prob.png index 38c3210..a2ded7b 100644 Binary files a/data/predictions/CSNK1G3/CSNK1G3_logo_prob.png and b/data/predictions/CSNK1G3/CSNK1G3_logo_prob.png differ diff --git a/data/predictions/CSNK1G3/metadata.json b/data/predictions/CSNK1G3/metadata.json index 3412c50..9a36fe7 100644 --- a/data/predictions/CSNK1G3/metadata.json +++ b/data/predictions/CSNK1G3/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":17,"npartners":18,"central_res":"ST","nsites":21,"type":"Serine/threonine kinase","name":"CSNK1G3","ensp":"ENSP00000353904"} +{"rm_p":"Yes","npartners_with_sites":17,"npartners":18,"central_res":"ST","nsites":21,"type":"Serine/threonine kinase","desc":"Casein kinase I isoform gamma-3","family":"CK1_CK1","name":"CSNK1G3","ensp":"ENSP00000353904"} diff --git a/data/predictions/CSNK2A1/CSNK2A1_data.tsv b/data/predictions/CSNK2A1/CSNK2A1_data.tsv index 3ba26c3..4ce6dd6 100644 --- a/data/predictions/CSNK2A1/CSNK2A1_data.tsv +++ b/data/predictions/CSNK2A1/CSNK2A1_data.tsv @@ -1,23 +1,23 @@ name CSNK2A1 id ENSP00000217244 type Serine/threonine kinase -proline+1_removed Yes +proline+1_removed No npartners 301 npartners_with_sites 265 -nsites 85 +nsites 86 // motif score fg_matches fg_size bg_matches bg_size fold_increase ..D..[ST]D.E.. 922.96 15 2842 0 9383 Inf ....D[ST]D.D.. 922.96 15 2609 0 9290 Inf .....[ST]D.E.D 622.33 13 2827 1 9383 43.15 +...P.[ST]PP... 332.89 20 3534 1 10000 56.59 ....E[ST]..EE. 328.49 20 2731 2 9364 34.29 -.....[ST]EDE.. 326.67 20 2814 3 9382 22.23 // prot_id prot_name position flank kinase source string_score ENSP00000363868 ABCA1 1242 YGISETTLEEI CSNK2A1 pelm;psite 621 -ENSP00000344789 ACACA 66 VSEDNSEDEIS CSNK2A1 hprd;pelm;psite 621 +ENSP00000347276 KANK2 375 PGRPESPPVFR hprd;pelm;psite 619 +ENSP00000257430 APC 1371 AQTPKSPPEHY hprd;psite 696 ENSP00000216115 BIK 33 EVLGMTDSEED CSNK2A1 psite 800 -ENSP00000350283 BRCA1 1218 EENLSSEDEEL hprd;pelm;psite 661 ENSP00000272298 CALM2 118 LGEKLTDEEVD psite 877 ENSP00000291295 CALM3 118 LGEKLTDEEVD psite 877 ENSP00000349467 CALM1 118 LGEKLTDEEVD psite 991 @@ -25,9 +25,9 @@ ENSP00000261448 CASQ2 385 DDDDNSDEEDN CSNK2A1 hprd;psite 623 ENSP00000261448 CASQ2 393 EDNDDSDDDDD CSNK2A1 psite 623 ENSP00000356346 PTPRC 1007 SSDDDSDSEEP CSNK2A1 hprd;pelm;psite 920 ENSP00000342681 CD5 485 DNSSDSDYDLH CSNK2A1 hprd;pelm;psite 758 +ENSP00000215574 CDC34 71 IDYPYSPPAFR hprd;psite 643 ENSP00000222005 CDC37 300 VEVYESLPEEL psite 793 ENSP00000283882 CFDP1 250 KLDWESFKEEE hprd;pelm;psite 621 -ENSP00000349508 CHD4 1602 APAPASEDEKV hprd;pelm;psite 728 ENSP00000316054 DVL3 192 TSFFDSDEDDS hprd;pelm;psite 943 ENSP00000379457 FAF1 291 HMVSDSDGDDF AURKA;CSNK2A1 hprd;pelm;psite 629 ENSP00000299543 CTDP1 584 EEEEDTDEDDH CSNK2A1 psite 672 @@ -35,24 +35,20 @@ ENSP00000216330 FKBP3 98 DKPKETKSEET psite 637 ENSP00000001008 FKBP4 436 SGDHPTDTEMK psite 928 ENSP00000268171 FURIN 773 QEECPSDSEED CSNK2A1 psite 857 ENSP00000299767 HSP90B1 786 EMDVGTDEEEE hprd;pelm;psite 646 -ENSP00000317904 GYS1 657 SSPHQSEDEED hprd;psite 621 -ENSP00000362649 HDAC1 445 AKRVKTEDEKE psite 989 -ENSP00000381331 HDAC2 518 EEFSDSEDEGE CSNK2A1 hprd;pelm;psite 995 ENSP00000264606 HDAC4 565 QEPIESDEEEA hprd;pelm;psite 767 +ENSP00000225983 HDAC5 235 SGPPGTPPSYK psite 790 ENSP00000225983 HDAC5 612 DEEGESGAEEG psite 790 +ENSP00000334061 HDAC6 22 RQNPQSPPQDS hprd;pelm;psite 720 ENSP00000272937 HES6 183 GDDLCSDLEEA CSNK2A1 hprd;psite 841 ENSP00000279392 HIRIP3 142 KAVEESSDEER hprd;pelm;psite 621 ENSP00000279392 HIRIP3 159 QRGEESSEEEE hprd;pelm;psite 621 -ENSP00000279392 HIRIP3 333 RLSGSSEDEED hprd;pelm;psite 621 ENSP00000308227 HMGA1 102 GISQESSEEEQ CSNK2A1 hprd;pelm;psite 621 -ENSP00000209875 CBX5 14 ADSSSSEDEEE hprd;pelm;psite 540 ENSP00000320176 HCLS1 23 GDDWDTDPDFV CSNK2A1 hprd;psite 849 ENSP00000335153 HSP90AA1 385 IEDVGSDEEEE CSNK2A1 hprd;pelm;psite 974 -ENSP00000349437 IGF2R 2409 GDDQDSEDEVL CSNK2A1 hprd;pelm;psite 638 ENSP00000349437 IGF2R 2484 SFHDDSDEDLL CSNK2A1 hprd;pelm;psite 638 ENSP00000216797 NFKBIA 283 QMLPESEDEES CSNK2A1 hprd;pelm;psite 933 -ENSP00000216797 NFKBIA 299 EFTEFTEDELP CSNK2A1 psite 933 -ENSP00000263274 LIG1 141 VLEEQSEDEDR hprd;pelm;psite 642 +ENSP00000320821 KIF1C 915 SARPPSPPLSS hprd;psite 619 +ENSP00000263274 LIG1 183 GDQPTTPPKPL hprd;pelm;psite 642 ENSP00000263274 LIG1 913 GEDSGSDPEDT hprd;pelm;psite 642 ENSP00000351490 MAX 144 DSSSESEPEEP CSNK2A1 hprd;psite 661 ENSP00000409167 MDC1 299 PPGEDSDTDVD CSNK2A1 hprd;pelm;psite 731 @@ -62,25 +58,30 @@ ENSP00000409167 MDC1 331 FIDSDTDAEEE CSNK2A1 hprd;pelm;psite 731 ENSP00000409167 MDC1 453 TTERDSDTDVE CSNK2A1 hprd;pelm;psite 731 ENSP00000409167 MDC1 455 ERDSDTDVEEE CSNK2A1 hprd;pelm;psite 731 ENSP00000409167 MDC1 579 HGDCETDAEEG psite 731 -ENSP00000252674 MLLT1 361 VEESNSEDEAS hprd;psite 445 +ENSP00000396219 MEF2C 396 KSEPVSPPRDR CDK1 hprd;pelm;psite 621 ENSP00000281043 MYCN 263 DTLSDSDDEDD CSNK2A1 hprd;pelm;psite 919 ENSP00000359074 L1CAM 1181 YRSLESDNEEK CSNK2A1 hprd;pelm;psite 621 -ENSP00000318195 NCL 28 EVEEDSEDEEM hprd;pelm;psite 943 -ENSP00000318195 NCL 34 EDEEMSEDEED hprd;pelm;psite 943 ENSP00000318195 NCL 145 AKKEDSDEEED hprd;pelm;psite 943 -ENSP00000318195 NCL 184 AAAPASEDEDD hprd;pelm;psite 943 -ENSP00000278568 PAK1 174 AVPPVSEDEDD CDK19 hprd;psite 620 ENSP00000265073 SUB1 17 SSGSDSDSEVD CSNK2A1 hprd;pelm;psite 961 +ENSP00000254722 SERPINF1 24 CQNPASPPEEG CSNK2A1 psite 621 +ENSP00000329933 PHF12 586 WPRPLTPPAAG hprd;psite 720 +ENSP00000329933 PHF12 880 EKTPPTPPSSI pelm;psite 720 ENSP00000328178 PPP1R2 87 DEDACSDTEAT CSNK2A1 hprd;pelm;psite 621 ENSP00000328178 PPP1R2 121 IQEQESSGEED CSNK2A1 hprd;pelm;psite 621 ENSP00000216455 PSMA3 243 KYAKESLKEED hprd;pelm;psite 654 ENSP00000361021 PTEN 370 VTPDVSDNEPD CSNK2A1;PLK3 hprd;pelm;psite 795 -ENSP00000370990 SHOX 106 REDVKSEDEDG CSNK2A1 hprd;psite 621 +ENSP00000353622 SIN3A 277 YASPRSPPVQP hprd;pelm;psite 931 ENSP00000212015 SIRT1 659 GAEVYSDSEDD CSNK2A1 psite 983 +ENSP00000348551 NCOR2 149 KLEPVSPPSPP hprd;pelm;psite 481 +ENSP00000348551 NCOR2 152 PVSPPSPPHTD hprd;pelm;psite 481 +ENSP00000348551 NCOR2 215 PEKPVSPPPIE hprd;pelm;psite 481 +ENSP00000348551 NCOR2 2230 GIEPVSPPEGM hprd;psite 481 ENSP00000216297 SUPT16H 1004 KADRESRYEEE psite 429 ENSP00000265354 SRF 85 EGDSESGEEEE CSNK2A1;MAPKAPK2 hprd;pelm;psite 975 +ENSP00000265354 SRF 224 LNSPDSPPRSD hprd;pelm;psite 975 ENSP00000278412 SSRP1 444 DEYADSDEDQH hprd;pelm;psite 782 ENSP00000278412 SSRP1 510 SNEGDSDRDEK CSNK2A1 hprd;pelm;psite 782 +ENSP00000410452 STMN1 38 PEFPLSPPKKK CDK1;CDK2;MAPK13;MAPK3;PAK1;PRKCB;UHMK1 hprd;pelm;psite 621 ENSP00000222812 STX1A 14 RTAKDSDDDDD CSNK2A1 hprd;pelm;psite 669 ENSP00000351575 BDP1 1198 AEVIETDLEET hprd;psite 669 ENSP00000351575 BDP1 1883 ADDFESDYEEE hprd;psite 669 @@ -93,9 +94,9 @@ ENSP00000236192 VAMP4 30 LLEDDSDEEED CSNK2A1 hprd;pelm;psite 967 ENSP00000256474 VHL 33 DGGEESGAEES CSNK2A1 psite 621 ENSP00000256474 VHL 38 SGAEESGPEES CSNK2A1 psite 621 ENSP00000256474 VHL 43 SGPEESGPEEL CSNK2A1 psite 621 -ENSP00000275034 PHIP 1283 KVLSDSEDEEK hprd;pelm;psite 443 -ENSP00000262887 XRCC1 488 EDSGDTEDELR CSNK2A1;CSNK2A2 hprd;pelm;psite 907 +ENSP00000402084 WEE1 173 PDHPGTPPHKT WEE1 hprd;pelm;psite 720 ENSP00000262887 XRCC1 523 STDENTDSEEH CSNK2A1;CSNK2A2 hprd;pelm;psite 907 ENSP00000342011 XRCC4 233 VYDESTDEESE CSNK2A1 psite 919 ENSP00000270632 SPIB 144 PALEVSDSESD CSNK2A1 hprd;pelm 968 +ENSP00000347276 KANK2 19 TPGPASPPAFP hprd;pelm 619 ENSP00000252674 MLLT1 440 SRLSFSDSESD hprd;pelm 445 diff --git a/data/predictions/CSNK2A1/CSNK2A1_logo_bits.pdf b/data/predictions/CSNK2A1/CSNK2A1_logo_bits.pdf index 2998210..7929997 100644 Binary files a/data/predictions/CSNK2A1/CSNK2A1_logo_bits.pdf and b/data/predictions/CSNK2A1/CSNK2A1_logo_bits.pdf differ diff --git a/data/predictions/CSNK2A1/CSNK2A1_logo_bits.png b/data/predictions/CSNK2A1/CSNK2A1_logo_bits.png index 98cdbe8..0642a1e 100644 Binary files a/data/predictions/CSNK2A1/CSNK2A1_logo_bits.png and b/data/predictions/CSNK2A1/CSNK2A1_logo_bits.png differ diff --git a/data/predictions/CSNK2A1/CSNK2A1_logo_prob.pdf b/data/predictions/CSNK2A1/CSNK2A1_logo_prob.pdf index b56168d..5a783cf 100644 Binary files a/data/predictions/CSNK2A1/CSNK2A1_logo_prob.pdf and b/data/predictions/CSNK2A1/CSNK2A1_logo_prob.pdf differ diff --git a/data/predictions/CSNK2A1/CSNK2A1_logo_prob.png b/data/predictions/CSNK2A1/CSNK2A1_logo_prob.png index fcc33de..94fc985 100644 Binary files a/data/predictions/CSNK2A1/CSNK2A1_logo_prob.png and b/data/predictions/CSNK2A1/CSNK2A1_logo_prob.png differ diff --git a/data/predictions/CSNK2A1/metadata.json b/data/predictions/CSNK2A1/metadata.json index 73330f7..ef6a6b8 100644 --- a/data/predictions/CSNK2A1/metadata.json +++ b/data/predictions/CSNK2A1/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":265,"npartners":301,"central_res":"ST","nsites":85,"type":"Serine/threonine kinase","name":"CSNK2A1","ensp":"ENSP00000217244"} 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","kinase":"CSNK2A1","source":"hprd;pelm;psite","string_score":669},{"prot_id":"ENSP00000351575","prot_name":"BDP1","position":1198,"flank":"AEVIETDLEET","kinase":"","source":"hprd;psite","string_score":669},{"prot_id":"ENSP00000351575","prot_name":"BDP1","position":1883,"flank":"ADDFESDYEEE","kinase":"","source":"hprd;psite","string_score":669},{"prot_id":"ENSP00000411532","prot_name":"TOP2A","position":1295,"flank":"KRNPWSDSESD","kinase":"","source":"hprd;pelm;psite","string_score":847},{"prot_id":"ENSP00000411532","prot_name":"TOP2A","position":1332,"flank":"TMDLDSDEDFS","kinase":"","source":"hprd;pelm;psite","string_score":847},{"prot_id":"ENSP00000411532","prot_name":"TOP2A","position":1343,"flank":"DFDEKTDDEDF","kinase":"CSNK2A1;PLK1;PLK3;PRKCB","source":"hprd;pelm;psite","string_score":847},{"prot_id":"ENSP00000411532","prot_name":"TOP2A","position":1377,"flank":"QKSVVSDLEAD","kinase":"CSNK2A1","source":"hprd;pelm;psite","string_score":847},{"prot_id":"ENSP00000302640","prot_name":"UBTF","position":364,"flank":"LRFLESLPEEE","kinase":"","source":"psite","string_score":654},{"prot_id":"ENSP00000236192","prot_name":"VAMP4","position":30,"flank":"LLEDDSDEEED","kinase":"CSNK2A1","source":"hprd;pelm;psite","string_score":967},{"prot_id":"ENSP00000256474","prot_name":"VHL","position":33,"flank":"DGGEESGAEES","kinase":"CSNK2A1","source":"psite","string_score":621},{"prot_id":"ENSP00000256474","prot_name":"VHL","position":38,"flank":"SGAEESGPEES","kinase":"CSNK2A1","source":"psite","string_score":621},{"prot_id":"ENSP00000256474","prot_name":"VHL","position":43,"flank":"SGPEESGPEEL","kinase":"CSNK2A1","source":"psite","string_score":621},{"prot_id":"ENSP00000402084","prot_name":"WEE1","position":173,"flank":"PDHPGTPPHKT","kinase":"WEE1","source":"hprd;pelm;psite","string_score":720},{"prot_id":"ENSP00000262887","prot_name":"XRCC1","position":523,"flank":"STDENTDSEEH","kinase":"CSNK2A1;CSNK2A2","source":"hprd;pelm;psite","string_score":907},{"prot_id":"ENSP00000342011","prot_name":"XRCC4","position":233,"flank":"VYDESTDEESE","kinase":"CSNK2A1","source":"psite","string_score":919},{"prot_id":"ENSP00000270632","prot_name":"SPIB","position":144,"flank":"PALEVSDSESD","kinase":"CSNK2A1","source":"hprd;pelm","string_score":968},{"prot_id":"ENSP00000347276","prot_name":"KANK2","position":19,"flank":"TPGPASPPAFP","kinase":"","source":"hprd;pelm","string_score":619},{"prot_id":"ENSP00000252674","prot_name":"MLLT1","position":440,"flank":"SRLSFSDSESD","kinase":"","source":"hprd;pelm","string_score":445}] diff --git a/data/predictions/CSNK2A2/CSNK2A2_data.tsv b/data/predictions/CSNK2A2/CSNK2A2_data.tsv index 33b6111..2e227ec 100644 --- a/data/predictions/CSNK2A2/CSNK2A2_data.tsv +++ b/data/predictions/CSNK2A2/CSNK2A2_data.tsv @@ -1,131 +1,84 @@ name CSNK2A2 id ENSP00000262506 type Serine/threonine kinase -proline+1_removed Yes +proline+1_removed No npartners 135 npartners_with_sites 122 -nsites 169 +nsites 112 // motif score fg_matches fg_size bg_matches bg_size fold_increase -.S...[ST]D.E.. 629.01 11 1415 0 9383 Inf -.....[ST].DE.. 319.2 35 1344 28 9321 8.67 -.....[ST].EE.. 318.69 60 1404 62 9383 6.47 -....D[ST]...D. 23.01 20 1309 12 9293 11.83 -.....[ST]..EE. 21.79 38 1289 47 9281 5.82 +.S...[ST]D.E.. 628.91 11 1662 0 9978 Inf +..D..[ST]..EE. 329.16 13 1354 1 9351 89.78 +..S..[ST].EE.. 324.57 16 1651 4 9978 24.17 +.....[ST].DE.. 317.49 35 1389 28 9379 8.44 +.....[ST]P.K.. 315.7 32 1694 22 10000 8.59 // prot_id prot_name position flank kinase source string_score ENSP00000340691 EIF4EBP1 85 GVTSPSSDEPP hprd;pelm;psite 621 -ENSP00000363868 ABCA1 1242 YGISETTLEEI CSNK2A1 pelm;psite 621 ENSP00000363868 ABCA1 1243 GISETTLEEIF CSNK2A1 pelm;psite 621 -ENSP00000359478 ABCC2 878 TVHDGSEEEDD hprd;pelm;psite 434 ENSP00000285238 ABCC3 912 LSALSSDGEGQ psite 434 ENSP00000344789 ACACA 66 VSEDNSEDEIS CSNK2A1 hprd;pelm;psite 621 -ENSP00000344789 ACACA 647 MNRIDTGWLDR psite 621 -ENSP00000372654 AQP4 180 FASCDSKRTDV PRKCA psite 733 -ENSP00000262053 ATF1 36 QVSSLSESEES CSNK1A1;CSNK2A1 hprd;pelm;psite 619 -ENSP00000264110 ATF2 121 TPIIRSKIEEP PRKCA;PRKCB psite 695 -ENSP00000264110 ATF2 305 SGLVRTQSEES psite 695 -ENSP00000349467 CALM1 80 RKMKDTDSEEE CSNK2A1 pelm;psite 627 -ENSP00000349467 CALM1 82 MKDTDSEEEIR psite 627 -ENSP00000349467 CALM1 118 LGEKLTDEEVD psite 627 -ENSP00000261448 CASQ2 385 DDDDNSDEEDN CSNK2A1 hprd;psite 621 -ENSP00000261448 CASQ2 393 EDNDDSDDDDD CSNK2A1 psite 621 -ENSP00000256897 CCNH 307 YVSKKSKHEEE hprd;psite 511 +ENSP00000269397 CBX4 349 GSRKLSPTKEA hprd;psite 402 ENSP00000356346 PTPRC 1007 SSDDDSDSEEP CSNK2A1 hprd;pelm;psite 919 ENSP00000222005 CDC37 13 DHIEVSDDEDE CSNK2A1;CSNK2A2 hprd;pelm;psite 743 -ENSP00000222005 CDC37 118 PWNVDTLSKDG psite 743 -ENSP00000222005 CDC37 300 VEVYESLPEEL psite 743 ENSP00000222005 CDC37 370 EAVPKTGDEKD psite 743 -ENSP00000395546 CSNK2B 21 ADVKMSSSEEV CSNK2A1;CSNK2A2 psite 982 -ENSP00000410942 CSNK2B 21 ADVKMSSSEEV CSNK2A1;CSNK2A2 psite 527 -ENSP00000415615 CSNK2B 21 ADVKMSSSEEV CSNK2A1;CSNK2A2 psite 996 -ENSP00000395546 CSNK2B 22 DVKMSSSEEVS CSNK2A1;CSNK2A2 psite 982 -ENSP00000410942 CSNK2B 22 DVKMSSSEEVS CSNK2A1;CSNK2A2 psite 527 -ENSP00000415615 CSNK2B 22 DVKMSSSEEVS CSNK2A1;CSNK2A2 psite 996 -ENSP00000246891 CSN1S1 41 PIPLESREEYM hprd;pelm;psite 758 -ENSP00000246891 CSN1S1 89 ESSISSSSEEM hprd;psite 758 -ENSP00000246891 CSN1S1 90 SSISSSSEEMS hprd;pelm;psite 758 +ENSP00000395546 CSNK2B 228 ASNFKSPVKTI CDK1 psite 982 +ENSP00000410942 CSNK2B 228 ASNFKSPVKTI CDK1 psite 527 +ENSP00000415615 CSNK2B 228 ASNFKSPVKTI CDK1 psite 996 ENSP00000344456 CTNNB1 102 AMFPETLDEGM CSNK2A1;CSNK2A2 hprd;pelm;psite 824 -ENSP00000254079 PPP1R1B 45 RLSEHSSPEEE CSNK2A1 hprd;psite 621 -ENSP00000254079 PPP1R1B 102 NENQASEEEDE CSNK2A1 hprd;psite 621 ENSP00000313420 PRKDC 875 LLTVTSSDEMM psite 742 -ENSP00000313420 PRKDC 2116 QGEEDSVPRDL hprd;psite 742 -ENSP00000313420 PRKDC 3820 LLNTMSQEEKA psite 742 ENSP00000005340 DVL2 211 TSLGDSDEEDT hprd;psite 851 -ENSP00000316054 DVL3 192 TSFFDSDEDDS hprd;pelm;psite 859 -ENSP00000236957 EEF1B2 95 SGATDSKDDDD hprd;pelm;psite 699 ENSP00000236957 EEF1B2 106 IDLFGSDDEEE CSNK2A1 hprd;pelm;psite 699 -ENSP00000273783 EIF2B5 535 EQSMDSEEPDS GSK3B hprd;pelm;psite 621 +ENSP00000247161 ELK1 389 PIAPRSPAKLS MAPK14;MAPK3 hprd;pelm;psite 622 ENSP00000299543 CTDP1 474 SSSSASDGESE psite 671 -ENSP00000299543 CTDP1 575 ESLDQSMEEEE CSNK2A1 hprd;pelm;psite 671 -ENSP00000299543 CTDP1 584 EEEEDTDEDDH CSNK2A1 psite 671 -ENSP00000216330 FKBP3 98 DKPKETKSEET psite 621 -ENSP00000341344 GGA1 270 RLASDTEDNDE psite 802 -ENSP00000311962 GGA2 233 VSKRVSAVEEV psite 407 -ENSP00000311962 GGA2 286 RLASDTTDDDD psite 407 -ENSP00000245541 GGA3 217 TKRLHTLEEVN psite 779 ENSP00000299767 HSP90B1 44 REGSRTDDEVV psite 621 ENSP00000299767 HSP90B1 306 EEKEESDDEAA hprd;psite 621 ENSP00000299767 HSP90B1 786 EMDVGTDEEEE hprd;pelm;psite 621 ENSP00000362649 HDAC1 393 AIPEESGDEDE hprd;pelm;psite 654 -ENSP00000362649 HDAC1 421 CEEEFSDSEEE CSNK2A1 hprd;pelm;psite 654 -ENSP00000362649 HDAC1 423 EEFSDSEEEGE CSNK2A1 hprd;pelm;psite 654 ENSP00000362649 HDAC1 445 AKRVKTEDEKE psite 654 ENSP00000381331 HDAC2 488 AVHEDSGDEDG CSNK2A1 hprd;pelm;psite 652 ENSP00000381331 HDAC2 518 EEFSDSEDEGE CSNK2A1 hprd;pelm;psite 652 -ENSP00000334061 HDAC6 458 DNVEESEEEGP psite 621 ENSP00000272937 HES6 183 GDDLCSDLEEA CSNK2A1 hprd;psite 558 ENSP00000308227 HMGA1 102 GISQESSEEEQ CSNK2A1 hprd;pelm;psite 621 -ENSP00000319690 HNRNPC 233 MKNDKSEEEQS hprd;pelm;psite 621 -ENSP00000319690 HNRNPC 260 GGADDSAEEGD CSNK1A1;CSNK2A1 hprd;pelm;psite 621 +ENSP00000318687 HSPH1 700 LMKIGTPVKVR hprd;pelm;psite 633 ENSP00000335153 HSP90AA1 353 RDKEVSDDEAE CSNK2A1 hprd;pelm;psite 622 ENSP00000335153 HSP90AA1 385 IEDVGSDEEEE CSNK2A1 hprd;pelm;psite 622 ENSP00000335153 HSP90AA1 848 GDDDTSRMEEV hprd;pelm;psite 622 -ENSP00000302935 IL16 743 LQPNASLNEEE CSNK2A1 hprd;psite 621 -ENSP00000302935 IL16 947 LRLLSTQAEES psite 621 -ENSP00000320821 KIF1C 674 RLYADSDSGDD hprd;pelm;psite 619 -ENSP00000314620 MS4A1 231 NIVLLSAEEKK CSNK2A1 hprd;pelm;psite 621 -ENSP00000367207 MYC 265 PPTTSSDSEEE CSNK2A1 psite 673 +ENSP00000302935 IL16 757 GHPDGTPPKLD CDK1 hprd;psite 621 +ENSP00000320821 KIF1C 494 TVGVFSPKKTP hprd;pelm;psite 619 ENSP00000367207 MYC 267 TTSSDSEEEQE CSNK2A1 psite 673 ENSP00000367207 MYC 363 TSPRSSDTEEN CSNK2A1 hprd;psite 673 -ENSP00000379616 MYH11 1546 KRALETQMEEM psite 469 -ENSP00000379616 MYH11 1553 MEEMKTQLEEL psite 469 ENSP00000379616 MYH11 1674 EDARASRDEIF psite 469 -ENSP00000379616 MYH11 1961 ENADGSEEETD hprd;psite 469 -ENSP00000216181 MYH9 1382 VGCLETAEEVK psite 479 -ENSP00000216181 MYH9 1943 GAGDGSDEEVD CSNK2A1 hprd;pelm;psite 479 ENSP00000281043 MYCN 263 DTLSDSDDEDD CSNK2A1 hprd;pelm;psite 621 -ENSP00000369915 NAP1L4 125 ESEWHSENEEE hprd;pelm;psite 619 ENSP00000369915 NAP1L4 304 SGDGESLDEDS psite 619 -ENSP00000359074 L1CAM 1181 YRSLESDNEEK CSNK2A1 hprd;pelm;psite 899 ENSP00000318195 NCL 28 EVEEDSEDEEM hprd;pelm;psite 747 ENSP00000318195 NCL 34 EDEEMSEDEED hprd;pelm;psite 747 -ENSP00000318195 NCL 41 DEEDDSSGEEV hprd;pelm;psite 747 -ENSP00000318195 NCL 42 EEDDSSGEEVV hprd;pelm;psite 747 -ENSP00000318195 NCL 145 AKKEDSDEEED hprd;pelm;psite 747 +ENSP00000318195 NCL 67 KKVVVSPTKKV CDK2 hprd;pelm;psite 747 +ENSP00000318195 NCL 76 KVAVATPAKKA CDK2 hprd;pelm;psite 747 +ENSP00000318195 NCL 84 KKAAVTPGKKA hprd;psite 747 +ENSP00000318195 NCL 92 KKAAATPAKKT hprd;psite 747 +ENSP00000318195 NCL 99 AKKTVTPAKAV hprd;pelm;psite 747 +ENSP00000318195 NCL 106 AKAVTTPGKKG hprd;psite 747 +ENSP00000318195 NCL 113 GKKGATPGKAL hprd;psite 747 +ENSP00000318195 NCL 121 KALVATPGKKG CDK1;CDK2 hprd;pelm;psite 747 ENSP00000318195 NCL 184 AAAPASEDEDD hprd;pelm;psite 747 -ENSP00000318195 NCL 206 DEEDDSEEEAM hprd;pelm;psite 747 +ENSP00000318195 NCL 214 EAMETTPAKGK hprd;pelm;psite 747 ENSP00000318195 NCL 405 LPYKVTQDELK hprd;psite 747 ENSP00000384273 RELA 529 PNGLLSGDEDF CSNK2A1 pelm;psite 669 +ENSP00000347379 OCLN 376 GGNFETPSKRA hprd;psite 800 ENSP00000347379 OCLN 408 TTGGESCDELE CSNK2B hprd;pelm;psite 800 -ENSP00000378517 SPP1 26 QADSGSSEEKQ psite 619 -ENSP00000378517 SPP1 62 PQNAVSSEETN hprd;psite 619 -ENSP00000378517 SPP1 105 QDSIDSNDSDD psite 619 -ENSP00000378517 SPP1 108 IDSNDSDDVDD psite 619 -ENSP00000378517 SPP1 117 DDTDDSHQSDE psite 619 -ENSP00000378517 SPP1 219 PSDWDSRGKDS hprd;psite 619 -ENSP00000378517 SPP1 291 VVDPKSKEEDK psite 619 ENSP00000229794 MAPK14 175 GLARHTDDEMT hprd;psite 638 -ENSP00000269305 TP53 284 GRDRRTEEENL AURKB psite 448 +ENSP00000316454 PACS1 46 PPQQPTPPKLA hprd;pelm;psite 585 ENSP00000316454 PACS1 278 DIDNYSEEEEE CSNK2A1 hprd;pelm;psite 585 +ENSP00000316454 PACS1 495 LQGSASPSKVE hprd;pelm;psite 585 +ENSP00000316454 PACS1 511 RQKRSTPLKER psite 585 ENSP00000278568 PAK1 174 AVPPVSEDEDD CDK19 hprd;psite 619 ENSP00000265073 SUB1 17 SSGSDSDSEVD CSNK2A1 hprd;pelm;psite 465 ENSP00000357484 GOPC 376 APEVDSDDENV psite 569 -ENSP00000237596 PKD2 812 RSLDDSEEDDD CSNK2A1 hprd;pelm;psite 611 -ENSP00000328178 PPP1R2 121 IQEQESSGEED CSNK2A1 hprd;pelm;psite 621 -ENSP00000328178 PPP1R2 122 QEQESSGEEDS CSNK2A1 hprd;pelm;psite 621 -ENSP00000361021 PTEN 382 YRYSDTTDSDP CSNK2A1;PRKCZ;STK11 hprd;pelm;psite 766 +ENSP00000328178 PPP1R2 130 EDSDLSPEERE hprd;psite 621 +ENSP00000360683 PTPN1 386 GAQAASPAKGE CDK1;CSNK2A1 hprd;pelm;psite 621 ENSP00000355899 RRP15 11 PDSRVSEEENL hprd;psite 773 +ENSP00000355899 RRP15 19 ENLKKTPKKKM psite 773 ENSP00000368572 SAT1 149 GASDLSSEEGW CSNK2A1 hprd;pelm;psite 621 ENSP00000212015 SIRT1 162 FHSCESDEEDR psite 757 ENSP00000216297 SUPT16H 982 KESLGSEEESG hprd;pelm;psite 401 @@ -134,52 +87,42 @@ ENSP00000278412 SSRP1 278 LILLFSKDEDI hprd;psite 407 ENSP00000278412 SSRP1 437 EGMNPSYDEYA hprd;pelm;psite 407 ENSP00000278412 SSRP1 667 SKEFVSSDESS hprd;pelm;psite 407 ENSP00000278412 SSRP1 688 RRSEDSEEEEL CSNK2A1 hprd;pelm;psite 407 -ENSP00000222812 STX1A 14 RTAKDSDDDDD CSNK2A1 hprd;pelm;psite 663 ENSP00000358404 TCF7L2 82 DKSRESLEEAA psite 621 -ENSP00000406888 TCOF1 87 ISTSESSEEEE hprd;pelm;psite 622 ENSP00000406888 TCOF1 88 STSESSEEEEE hprd;pelm;psite 622 -ENSP00000406888 TCOF1 171 NTTLVSETEEE hprd;pelm;psite 622 -ENSP00000406888 TCOF1 173 TLVSETEEEGS hprd;psite 622 -ENSP00000406888 TCOF1 272 EEESESSEEGS psite 622 -ENSP00000406888 TCOF1 277 SSEEGSESEEE psite 622 -ENSP00000406888 TCOF1 279 EEGSESEEEAP psite 622 +ENSP00000406888 TCOF1 156 LLSGKSPRKSA CDK1 hprd;pelm;psite 622 +ENSP00000406888 TCOF1 310 APAKGTPGKGA hprd;pelm;psite 622 +ENSP00000406888 TCOF1 381 APAKESPRKGA hprd;pelm;psite 622 ENSP00000406888 TCOF1 477 EEDSRSSSEES hprd;pelm;psite 622 ENSP00000406888 TCOF1 478 EDSRSSSEESD hprd;pelm;psite 622 -ENSP00000406888 TCOF1 610 MDNSESSEESS hprd;pelm;psite 622 +ENSP00000406888 TCOF1 583 AKPTSSPAKGP CDK1;CDK2 hprd;pelm;psite 622 ENSP00000406888 TCOF1 699 SSSEESDSEEE hprd;psite 622 -ENSP00000406888 TCOF1 701 SEESDSEEEKT hprd;psite 622 ENSP00000406888 TCOF1 764 QEDSESSEEES hprd;pelm;psite 622 ENSP00000406888 TCOF1 765 EDSESSEEESD hprd;pelm;psite 622 ENSP00000406888 TCOF1 769 SSEEESDSEEA hprd;pelm;psite 622 ENSP00000406888 TCOF1 870 EEDSGSSEEES hprd;pelm;psite 622 ENSP00000406888 TCOF1 871 EDSGSSEEESD hprd;pelm;psite 622 ENSP00000406888 TCOF1 875 SSEEESDSEEE hprd;pelm;psite 622 -ENSP00000406888 TCOF1 877 EEESDSEEEAE hprd;pelm;psite 622 +ENSP00000406888 TCOF1 906 APAKESPRKGA hprd;pelm;psite 622 ENSP00000406888 TCOF1 934 QDDSGSSSEES hprd;pelm;psite 622 ENSP00000406888 TCOF1 935 DDSGSSSEESD hprd;pelm;psite 622 +ENSP00000406888 TCOF1 983 AQAASTPRKAR CDK1;CDK2 hprd;pelm;psite 622 ENSP00000406888 TCOF1 1001 SSSSESEDEDV hprd;pelm;psite 622 -ENSP00000406888 TCOF1 1144 PSRTETLVEET hprd;pelm;psite 622 +ENSP00000406888 TCOF1 1233 AASGTTPQKSR hprd;psite 622 +ENSP00000406888 TCOF1 1341 GEASVSPEKTS hprd;pelm;psite 622 ENSP00000263228 UBE2R2 233 YDDDDSGNEES CSNK2A1 hprd;pelm;psite 782 ENSP00000365891 WAS 483 SRAIHSSDEGE CSNK2A1 hprd;pelm;psite 619 -ENSP00000262887 XRCC1 408 MAGPGSSSEED hprd;pelm;psite 744 -ENSP00000262887 XRCC1 409 AGPGSSSEEDE hprd;pelm;psite 744 +ENSP00000262887 XRCC1 257 QEEKKTPSKPP hprd;pelm;psite 744 ENSP00000262887 XRCC1 421 SHSGGSGDEAP hprd;pelm;psite 744 +ENSP00000262887 XRCC1 447 AAGPSSPQKPP hprd;pelm;psite 744 ENSP00000262887 XRCC1 488 EDSGDTEDELR CSNK2A1;CSNK2A2 hprd;pelm;psite 744 ENSP00000262887 XRCC1 518 DPYAGSTDENT CSNK2A1;CSNK2A2 hprd;pelm;psite 744 ENSP00000262887 XRCC1 523 STDENTDSEEH CSNK2A1;CSNK2A2 hprd;pelm;psite 744 -ENSP00000270632 SPIB 129 PSPVLSEEEDL CSNK2A1 hprd;pelm 621 -ENSP00000384597 GTF2A1L 356 GSGDTSSNEEI CSNK2A1 hprd;pelm 727 -ENSP00000384597 GTF2A1L 357 SGDTSSNEEIG CSNK2A1 hprd;pelm 727 -ENSP00000265372 CREM 110 IEEERSEEEGT hprd 619 -ENSP00000318195 NCL 496 SNLSYSATEET hprd 747 -ENSP00000406888 TCOF1 694 PAEDSSSSEES hprd 622 -ENSP00000406888 TCOF1 695 AEDSSSSEESD hprd 622 -ENSP00000406888 TCOF1 862 AAQAQTGPEED hprd 622 -ENSP00000406888 TCOF1 198 AGQADSSSEDT hprd 622 +ENSP00000365025 CSNK2B 209 ASNFKSPVKTI CDK1 hprd;pelm 807 +ENSP00000384026 HMGA2 59 GSKNKSPSKAA CDK1 hprd;pelm 621 +ENSP00000406888 TCOF1 823 QAKQRSPSKVK pelm 622 ENSP00000406888 TCOF1 206 EDTSSSSDETD hprd 622 ENSP00000406888 TCOF1 210 SSSDETDVEGK hprd 622 ENSP00000406888 TCOF1 412 EEDSQSSSEES hprd 622 ENSP00000406888 TCOF1 413 EDSQSSSEESD hprd 622 ENSP00000406888 TCOF1 417 SSSEESDSEEE hprd 622 -ENSP00000406888 TCOF1 419 SEESDSEEEAP hprd 622 ENSP00000406888 TCOF1 556 ESSDSSDGEVP hprd 622 diff --git a/data/predictions/CSNK2A2/CSNK2A2_logo_bits.pdf b/data/predictions/CSNK2A2/CSNK2A2_logo_bits.pdf index f926fea..9977ea7 100644 Binary files a/data/predictions/CSNK2A2/CSNK2A2_logo_bits.pdf and b/data/predictions/CSNK2A2/CSNK2A2_logo_bits.pdf differ diff --git a/data/predictions/CSNK2A2/CSNK2A2_logo_bits.png b/data/predictions/CSNK2A2/CSNK2A2_logo_bits.png index cdfa23d..108d772 100644 Binary files a/data/predictions/CSNK2A2/CSNK2A2_logo_bits.png and b/data/predictions/CSNK2A2/CSNK2A2_logo_bits.png differ diff --git a/data/predictions/CSNK2A2/CSNK2A2_logo_prob.pdf b/data/predictions/CSNK2A2/CSNK2A2_logo_prob.pdf index b0bccbe..d51ed58 100644 Binary files a/data/predictions/CSNK2A2/CSNK2A2_logo_prob.pdf and b/data/predictions/CSNK2A2/CSNK2A2_logo_prob.pdf differ diff --git a/data/predictions/CSNK2A2/CSNK2A2_logo_prob.png b/data/predictions/CSNK2A2/CSNK2A2_logo_prob.png index addb2f2..5c51ea9 100644 Binary files a/data/predictions/CSNK2A2/CSNK2A2_logo_prob.png and b/data/predictions/CSNK2A2/CSNK2A2_logo_prob.png differ diff --git a/data/predictions/CSNK2A2/metadata.json b/data/predictions/CSNK2A2/metadata.json index 89ad95e..3cd34db 100644 --- a/data/predictions/CSNK2A2/metadata.json +++ b/data/predictions/CSNK2A2/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":122,"npartners":135,"central_res":"ST","nsites":169,"type":"Serine/threonine kinase","name":"CSNK2A2","ensp":"ENSP00000262506"} +{"rm_p":"No","npartners_with_sites":122,"npartners":135,"central_res":"ST","nsites":112,"type":"Serine/threonine kinase","desc":"Casein kinase II subunit alpha'","family":"CMGC_CK2","name":"CSNK2A2","ensp":"ENSP00000262506"} diff --git a/data/predictions/CSNK2A2/motifs.json b/data/predictions/CSNK2A2/motifs.json index e9dbad3..dd589a9 100644 --- a/data/predictions/CSNK2A2/motifs.json +++ b/data/predictions/CSNK2A2/motifs.json @@ -1 +1 @@ -[{"motif":".S...[ST]D.E..","score":629.01,"fg_matches":11,"fg_size":1415,"bg_matches":0,"bg_size":9383,"fold_increase":"Inf"},{"motif":".....[ST].DE..","score":319.2,"fg_matches":35,"fg_size":1344,"bg_matches":28,"bg_size":9321,"fold_increase":8.67},{"motif":".....[ST].EE..","score":318.69,"fg_matches":60,"fg_size":1404,"bg_matches":62,"bg_size":9383,"fold_increase":6.47},{"motif":"....D[ST]...D.","score":23.01,"fg_matches":20,"fg_size":1309,"bg_matches":12,"bg_size":9293,"fold_increase":11.83},{"motif":".....[ST]..EE.","score":21.79,"fg_matches":38,"fg_size":1289,"bg_matches":47,"bg_size":9281,"fold_increase":5.82}] 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+{"rm_p":"No","npartners_with_sites":42,"npartners":48,"central_res":"ST","nsites":73,"type":"Serine/threonine kinase","desc":"Dual specificity tyrosine-phosphorylation-regulated kinase 2","family":"CMGC_DYRK","name":"DYRK2","ensp":"ENSP00000342105"} diff --git a/data/predictions/DYRK4/DYRK4_logo_bits.pdf b/data/predictions/DYRK4/DYRK4_logo_bits.pdf index db25859..d686826 100644 Binary files a/data/predictions/DYRK4/DYRK4_logo_bits.pdf and b/data/predictions/DYRK4/DYRK4_logo_bits.pdf differ diff --git a/data/predictions/DYRK4/DYRK4_logo_bits.png b/data/predictions/DYRK4/DYRK4_logo_bits.png index 0d22b8c..e0d9630 100644 Binary files a/data/predictions/DYRK4/DYRK4_logo_bits.png and b/data/predictions/DYRK4/DYRK4_logo_bits.png differ diff --git a/data/predictions/DYRK4/DYRK4_logo_prob.pdf b/data/predictions/DYRK4/DYRK4_logo_prob.pdf index 7a32c49..7a7495d 100644 Binary files a/data/predictions/DYRK4/DYRK4_logo_prob.pdf and b/data/predictions/DYRK4/DYRK4_logo_prob.pdf differ diff --git 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receptor","family":"TK_EGFR","name":"EGFR","ensp":"ENSP00000275493"} diff --git a/data/predictions/EIF2AK1/EIF2AK1_logo_bits.pdf b/data/predictions/EIF2AK1/EIF2AK1_logo_bits.pdf index 7cd745f..2aa03b5 100644 Binary files a/data/predictions/EIF2AK1/EIF2AK1_logo_bits.pdf and b/data/predictions/EIF2AK1/EIF2AK1_logo_bits.pdf differ diff --git a/data/predictions/EIF2AK1/EIF2AK1_logo_bits.png b/data/predictions/EIF2AK1/EIF2AK1_logo_bits.png index 97d654e..79258b3 100644 Binary files a/data/predictions/EIF2AK1/EIF2AK1_logo_bits.png and b/data/predictions/EIF2AK1/EIF2AK1_logo_bits.png differ diff --git a/data/predictions/EIF2AK1/EIF2AK1_logo_prob.pdf b/data/predictions/EIF2AK1/EIF2AK1_logo_prob.pdf index aff5017..ee5caa6 100644 Binary files a/data/predictions/EIF2AK1/EIF2AK1_logo_prob.pdf and b/data/predictions/EIF2AK1/EIF2AK1_logo_prob.pdf differ diff --git a/data/predictions/EIF2AK1/EIF2AK1_logo_prob.png b/data/predictions/EIF2AK1/EIF2AK1_logo_prob.png index 379763f..0749c4a 100644 Binary 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+{"rm_p":"Yes","npartners_with_sites":94,"npartners":106,"central_res":"ST","nsites":127,"type":"Serine/threonine kinase","desc":"Eukaryotic translation initiation factor 2-alpha kinase 3","family":"Other_PEK","name":"EIF2AK3","ensp":"ENSP00000307235"} diff --git a/data/predictions/EIF2AK4/EIF2AK4_logo_bits.pdf b/data/predictions/EIF2AK4/EIF2AK4_logo_bits.pdf index 1a5f9fb..1a4e0ef 100644 Binary files a/data/predictions/EIF2AK4/EIF2AK4_logo_bits.pdf and b/data/predictions/EIF2AK4/EIF2AK4_logo_bits.pdf differ diff --git a/data/predictions/EIF2AK4/EIF2AK4_logo_bits.png b/data/predictions/EIF2AK4/EIF2AK4_logo_bits.png index 74fd421..5151026 100644 Binary files a/data/predictions/EIF2AK4/EIF2AK4_logo_bits.png and b/data/predictions/EIF2AK4/EIF2AK4_logo_bits.png differ diff --git a/data/predictions/EIF2AK4/EIF2AK4_logo_prob.pdf b/data/predictions/EIF2AK4/EIF2AK4_logo_prob.pdf index 2edb619..311d65e 100644 Binary files a/data/predictions/EIF2AK4/EIF2AK4_logo_prob.pdf and 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+{"rm_p":"No","npartners_with_sites":53,"npartners":67,"central_res":"Y","nsites":15,"type":"Tyrosine kinase","desc":"Ephrin type-A receptor 4","family":"TK_Eph","name":"EPHA4","ensp":"ENSP00000281821"} diff --git a/data/predictions/ERBB2/ERBB2_logo_bits.pdf b/data/predictions/ERBB2/ERBB2_logo_bits.pdf index 3682028..79c30df 100644 Binary files a/data/predictions/ERBB2/ERBB2_logo_bits.pdf and b/data/predictions/ERBB2/ERBB2_logo_bits.pdf differ diff --git a/data/predictions/ERBB2/ERBB2_logo_bits.png b/data/predictions/ERBB2/ERBB2_logo_bits.png index c9e44c6..ade5b35 100644 Binary files a/data/predictions/ERBB2/ERBB2_logo_bits.png and b/data/predictions/ERBB2/ERBB2_logo_bits.png differ diff --git a/data/predictions/ERBB2/ERBB2_logo_prob.pdf b/data/predictions/ERBB2/ERBB2_logo_prob.pdf index 5fc79d3..2da814c 100644 Binary files a/data/predictions/ERBB2/ERBB2_logo_prob.pdf and b/data/predictions/ERBB2/ERBB2_logo_prob.pdf differ diff --git a/data/predictions/ERBB2/ERBB2_logo_prob.png 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@@ -{"rm_p":"No","npartners_with_sites":98,"npartners":120,"central_res":"Y","nsites":53,"type":"Tyrosine kinase","name":"ERBB3","ensp":"ENSP00000267101"} +{"rm_p":"No","npartners_with_sites":98,"npartners":120,"central_res":"Y","nsites":53,"type":"Tyrosine kinase","desc":"Receptor tyrosine-protein kinase erbB-3","family":"TK_EGFR","name":"ERBB3","ensp":"ENSP00000267101"} diff --git a/data/predictions/ERBB4/ERBB4_logo_bits.pdf b/data/predictions/ERBB4/ERBB4_logo_bits.pdf index e4ade37..830cd00 100644 Binary files a/data/predictions/ERBB4/ERBB4_logo_bits.pdf and b/data/predictions/ERBB4/ERBB4_logo_bits.pdf differ diff --git a/data/predictions/ERBB4/ERBB4_logo_bits.png b/data/predictions/ERBB4/ERBB4_logo_bits.png index cfa305b..c9d5b4c 100644 Binary files a/data/predictions/ERBB4/ERBB4_logo_bits.png and b/data/predictions/ERBB4/ERBB4_logo_bits.png differ diff --git a/data/predictions/ERBB4/ERBB4_logo_prob.pdf b/data/predictions/ERBB4/ERBB4_logo_prob.pdf index bf85a74..20cd761 100644 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+{"rm_p":"Yes","npartners_with_sites":6,"npartners":11,"central_res":"ST","nsites":10,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase/endoribonuclease IRE2","family":"Other_IRE","name":"ERN2","ensp":"ENSP00000256797"} diff --git a/data/predictions/FER/FER_logo_bits.pdf b/data/predictions/FER/FER_logo_bits.pdf index 1fa749a..eaf5bba 100644 Binary files a/data/predictions/FER/FER_logo_bits.pdf and b/data/predictions/FER/FER_logo_bits.pdf differ diff --git a/data/predictions/FER/FER_logo_bits.png b/data/predictions/FER/FER_logo_bits.png index 7d13797..3d88ade 100644 Binary files a/data/predictions/FER/FER_logo_bits.png and b/data/predictions/FER/FER_logo_bits.png differ diff --git a/data/predictions/FER/FER_logo_prob.pdf b/data/predictions/FER/FER_logo_prob.pdf index 5ace178..a78c133 100644 Binary files a/data/predictions/FER/FER_logo_prob.pdf and b/data/predictions/FER/FER_logo_prob.pdf differ diff --git a/data/predictions/FER/FER_logo_prob.png 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-{"rm_p":"No","npartners_with_sites":99,"npartners":134,"central_res":"Y","nsites":47,"type":"Tyrosine kinase","name":"FGFR2","ensp":"ENSP00000410294"} +{"rm_p":"No","npartners_with_sites":99,"npartners":134,"central_res":"Y","nsites":47,"type":"Tyrosine kinase","desc":"Fibroblast growth factor receptor 2","family":"TK_FGFR","name":"FGFR2","ensp":"ENSP00000410294"} diff --git a/data/predictions/FGR/FGR_logo_bits.pdf b/data/predictions/FGR/FGR_logo_bits.pdf index fc04ff6..adf7ec2 100644 Binary files a/data/predictions/FGR/FGR_logo_bits.pdf and b/data/predictions/FGR/FGR_logo_bits.pdf differ diff --git a/data/predictions/FGR/FGR_logo_bits.png b/data/predictions/FGR/FGR_logo_bits.png index fdbafd3..4bf8895 100644 Binary files a/data/predictions/FGR/FGR_logo_bits.png and b/data/predictions/FGR/FGR_logo_bits.png differ diff --git a/data/predictions/FGR/FGR_logo_prob.pdf b/data/predictions/FGR/FGR_logo_prob.pdf index 293dd98..bb428fe 100644 Binary files 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+{"rm_p":"No","npartners_with_sites":201,"npartners":235,"central_res":"ST","nsites":199,"type":"Serine/threonine kinase","desc":"Glycogen synthase kinase-3 beta","family":"CMGC_GSK","name":"GSK3B","ensp":"ENSP00000324806"} diff --git a/data/predictions/GUCY2C/GUCY2C_logo_bits.pdf b/data/predictions/GUCY2C/GUCY2C_logo_bits.pdf index 3d6fa45..097bb50 100644 Binary files a/data/predictions/GUCY2C/GUCY2C_logo_bits.pdf and b/data/predictions/GUCY2C/GUCY2C_logo_bits.pdf differ diff --git a/data/predictions/GUCY2C/GUCY2C_logo_bits.png b/data/predictions/GUCY2C/GUCY2C_logo_bits.png index add65ac..a8dd244 100644 Binary files a/data/predictions/GUCY2C/GUCY2C_logo_bits.png and b/data/predictions/GUCY2C/GUCY2C_logo_bits.png differ diff --git a/data/predictions/GUCY2C/GUCY2C_logo_prob.pdf b/data/predictions/GUCY2C/GUCY2C_logo_prob.pdf index 075df73..614cf6e 100644 Binary files a/data/predictions/GUCY2C/GUCY2C_logo_prob.pdf and b/data/predictions/GUCY2C/GUCY2C_logo_prob.pdf differ diff --git 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kinase","desc":"Retinal guanylyl cyclase 2","family":"RGC_RGC","name":"GUCY2F","ensp":"ENSP00000218006"} diff --git a/data/predictions/HCK/HCK_logo_bits.pdf b/data/predictions/HCK/HCK_logo_bits.pdf index 3b82379..1dd8062 100644 Binary files a/data/predictions/HCK/HCK_logo_bits.pdf and b/data/predictions/HCK/HCK_logo_bits.pdf differ diff --git a/data/predictions/HCK/HCK_logo_bits.png b/data/predictions/HCK/HCK_logo_bits.png index e45386a..867236c 100644 Binary files a/data/predictions/HCK/HCK_logo_bits.png and b/data/predictions/HCK/HCK_logo_bits.png differ diff --git a/data/predictions/HCK/HCK_logo_prob.pdf b/data/predictions/HCK/HCK_logo_prob.pdf index 0f4c43e..bbf0280 100644 Binary files a/data/predictions/HCK/HCK_logo_prob.pdf and b/data/predictions/HCK/HCK_logo_prob.pdf differ diff --git a/data/predictions/HCK/HCK_logo_prob.png b/data/predictions/HCK/HCK_logo_prob.png index 1bcd90d..e1d6183 100644 Binary files a/data/predictions/HCK/HCK_logo_prob.png and 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+{"rm_p":"No","npartners_with_sites":13,"npartners":15,"central_res":"ST","nsites":105,"type":"Serine/threonine kinase","desc":"Homeodomain-interacting protein kinase 1","family":"CMGC_DYRK","name":"HIPK1","ensp":"ENSP00000358571"} diff --git a/data/predictions/HIPK2/HIPK2_logo_bits.pdf b/data/predictions/HIPK2/HIPK2_logo_bits.pdf index 34b8384..be31ee4 100644 Binary files a/data/predictions/HIPK2/HIPK2_logo_bits.pdf and b/data/predictions/HIPK2/HIPK2_logo_bits.pdf differ diff --git a/data/predictions/HIPK2/HIPK2_logo_bits.png b/data/predictions/HIPK2/HIPK2_logo_bits.png index 7e32276..c9897dc 100644 Binary files a/data/predictions/HIPK2/HIPK2_logo_bits.png and b/data/predictions/HIPK2/HIPK2_logo_bits.png differ diff --git a/data/predictions/HIPK2/HIPK2_logo_prob.pdf b/data/predictions/HIPK2/HIPK2_logo_prob.pdf index 6b2de8e..037dfa2 100644 Binary files a/data/predictions/HIPK2/HIPK2_logo_prob.pdf and b/data/predictions/HIPK2/HIPK2_logo_prob.pdf differ diff --git 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+++ b/data/predictions/HIPK3/metadata.json @@ -1 +1 @@ -{"rm_p":"No","npartners_with_sites":34,"npartners":39,"central_res":"ST","nsites":189,"type":"Serine/threonine kinase","name":"HIPK3","ensp":"ENSP00000304226"} +{"rm_p":"No","npartners_with_sites":34,"npartners":39,"central_res":"ST","nsites":189,"type":"Serine/threonine kinase","desc":"Homeodomain-interacting protein kinase 3","family":"CMGC_DYRK","name":"HIPK3","ensp":"ENSP00000304226"} diff --git a/data/predictions/ICK/ICK_logo_bits.pdf b/data/predictions/ICK/ICK_logo_bits.pdf index 3b3b8bd..4b3bcf2 100644 Binary files a/data/predictions/ICK/ICK_logo_bits.pdf and b/data/predictions/ICK/ICK_logo_bits.pdf differ diff --git a/data/predictions/ICK/ICK_logo_bits.png b/data/predictions/ICK/ICK_logo_bits.png index 4245b91..df03af9 100644 Binary files a/data/predictions/ICK/ICK_logo_bits.png and b/data/predictions/ICK/ICK_logo_bits.png differ diff --git a/data/predictions/ICK/ICK_logo_prob.pdf b/data/predictions/ICK/ICK_logo_prob.pdf 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+{"rm_p":"Yes","npartners_with_sites":164,"npartners":190,"central_res":"ST","nsites":218,"type":"Serine/threonine kinase","desc":"Inhibitor of nuclear factor kappa-B kinase subunit beta","family":"Other_IKK","name":"IKBKB","ensp":"ENSP00000339151"} diff --git a/data/predictions/ILK/ILK_logo_bits.pdf b/data/predictions/ILK/ILK_logo_bits.pdf index b965e69..c4ae42c 100644 Binary files a/data/predictions/ILK/ILK_logo_bits.pdf and b/data/predictions/ILK/ILK_logo_bits.pdf differ diff --git a/data/predictions/ILK/ILK_logo_bits.png b/data/predictions/ILK/ILK_logo_bits.png index 89d08b1..2984798 100644 Binary files a/data/predictions/ILK/ILK_logo_bits.png and b/data/predictions/ILK/ILK_logo_bits.png differ diff --git a/data/predictions/ILK/ILK_logo_prob.pdf b/data/predictions/ILK/ILK_logo_prob.pdf index 6bbf09b..a966b3a 100644 Binary files a/data/predictions/ILK/ILK_logo_prob.pdf and b/data/predictions/ILK/ILK_logo_prob.pdf differ diff --git a/data/predictions/ILK/ILK_logo_prob.png 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-{"rm_p":"No","npartners_with_sites":246,"npartners":303,"central_res":"Y","nsites":96,"type":"Tyrosine kinase","name":"INSR","ensp":"ENSP00000303830"} +{"rm_p":"No","npartners_with_sites":246,"npartners":303,"central_res":"Y","nsites":96,"type":"Tyrosine kinase","desc":"Insulin receptor","family":"TK_InsR","name":"INSR","ensp":"ENSP00000303830"} diff --git a/data/predictions/IRAK1/IRAK1_logo_bits.pdf b/data/predictions/IRAK1/IRAK1_logo_bits.pdf index d2c2601..a700b6e 100644 Binary files a/data/predictions/IRAK1/IRAK1_logo_bits.pdf and b/data/predictions/IRAK1/IRAK1_logo_bits.pdf differ diff --git a/data/predictions/IRAK1/IRAK1_logo_bits.png b/data/predictions/IRAK1/IRAK1_logo_bits.png index fcb4fed..a666f9a 100644 Binary files a/data/predictions/IRAK1/IRAK1_logo_bits.png and b/data/predictions/IRAK1/IRAK1_logo_bits.png differ diff --git a/data/predictions/IRAK1/IRAK1_logo_prob.pdf b/data/predictions/IRAK1/IRAK1_logo_prob.pdf index 7099812..107d569 100644 Binary files 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JAK1","family":"TK_JAK","name":"JAK1","ensp":"ENSP00000343204"} diff --git a/data/predictions/JAK2/JAK2_logo_bits.pdf b/data/predictions/JAK2/JAK2_logo_bits.pdf index 64f9524..722f5ab 100644 Binary files a/data/predictions/JAK2/JAK2_logo_bits.pdf and b/data/predictions/JAK2/JAK2_logo_bits.pdf differ diff --git a/data/predictions/JAK2/JAK2_logo_bits.png b/data/predictions/JAK2/JAK2_logo_bits.png index 6e7837b..8ab2405 100644 Binary files a/data/predictions/JAK2/JAK2_logo_bits.png and b/data/predictions/JAK2/JAK2_logo_bits.png differ diff --git a/data/predictions/JAK2/JAK2_logo_prob.pdf b/data/predictions/JAK2/JAK2_logo_prob.pdf index 73008ea..78f1329 100644 Binary files a/data/predictions/JAK2/JAK2_logo_prob.pdf and b/data/predictions/JAK2/JAK2_logo_prob.pdf differ diff --git a/data/predictions/JAK2/JAK2_logo_prob.png b/data/predictions/JAK2/JAK2_logo_prob.png index 6f51846..b1c5bb3 100644 Binary files a/data/predictions/JAK2/JAK2_logo_prob.png and 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+{"rm_p":"No","npartners_with_sites":133,"npartners":185,"central_res":"Y","nsites":124,"type":"Tyrosine kinase","desc":"Tyrosine-protein kinase JAK3","family":"TK_JAK","name":"JAK3","ensp":"ENSP00000391676"} diff --git a/data/predictions/KDR/KDR_logo_bits.pdf b/data/predictions/KDR/KDR_logo_bits.pdf index b14f369..fe46182 100644 Binary files a/data/predictions/KDR/KDR_logo_bits.pdf and b/data/predictions/KDR/KDR_logo_bits.pdf differ diff --git a/data/predictions/KDR/KDR_logo_bits.png b/data/predictions/KDR/KDR_logo_bits.png index e62798b..c09cfda 100644 Binary files a/data/predictions/KDR/KDR_logo_bits.png and b/data/predictions/KDR/KDR_logo_bits.png differ diff --git a/data/predictions/KDR/KDR_logo_prob.pdf b/data/predictions/KDR/KDR_logo_prob.pdf index 41f8811..b205886 100644 Binary files a/data/predictions/KDR/KDR_logo_prob.pdf and b/data/predictions/KDR/KDR_logo_prob.pdf differ diff --git a/data/predictions/KDR/KDR_logo_prob.png b/data/predictions/KDR/KDR_logo_prob.png index 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-{"rm_p":"Yes","npartners_with_sites":34,"npartners":41,"central_res":"ST","nsites":48,"type":"Serine/threonine kinase","name":"KSR1","ensp":"ENSP00000268763"} +{"rm_p":"Yes","npartners_with_sites":34,"npartners":41,"central_res":"ST","nsites":48,"type":"Serine/threonine kinase","desc":"Kinase suppressor of Ras 1","family":"TKL_RAF","name":"KSR1","ensp":"ENSP00000268763"} diff --git a/data/predictions/LATS1/LATS1_logo_bits.pdf b/data/predictions/LATS1/LATS1_logo_bits.pdf index ab0f6fa..7c1197c 100644 Binary files a/data/predictions/LATS1/LATS1_logo_bits.pdf and b/data/predictions/LATS1/LATS1_logo_bits.pdf differ diff --git a/data/predictions/LATS1/LATS1_logo_bits.png b/data/predictions/LATS1/LATS1_logo_bits.png index 9cf5367..85bafd5 100644 Binary files a/data/predictions/LATS1/LATS1_logo_bits.png and b/data/predictions/LATS1/LATS1_logo_bits.png differ diff --git a/data/predictions/LATS1/LATS1_logo_prob.pdf b/data/predictions/LATS1/LATS1_logo_prob.pdf index ac378e6..c787482 100644 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kinase","desc":"Tyrosine-protein kinase Lck","family":"TK_Src","name":"LCK","ensp":"ENSP00000337825"} diff --git a/data/predictions/LIMK1/LIMK1_logo_bits.pdf b/data/predictions/LIMK1/LIMK1_logo_bits.pdf index 9c773fc..38a9c05 100644 Binary files a/data/predictions/LIMK1/LIMK1_logo_bits.pdf and b/data/predictions/LIMK1/LIMK1_logo_bits.pdf differ diff --git a/data/predictions/LIMK1/LIMK1_logo_bits.png b/data/predictions/LIMK1/LIMK1_logo_bits.png index 6dafc5b..7b758ba 100644 Binary files a/data/predictions/LIMK1/LIMK1_logo_bits.png and b/data/predictions/LIMK1/LIMK1_logo_bits.png differ diff --git a/data/predictions/LIMK1/LIMK1_logo_prob.pdf b/data/predictions/LIMK1/LIMK1_logo_prob.pdf index 9385553..d2fb96c 100644 Binary files a/data/predictions/LIMK1/LIMK1_logo_prob.pdf and b/data/predictions/LIMK1/LIMK1_logo_prob.pdf differ diff --git a/data/predictions/LIMK1/LIMK1_logo_prob.png b/data/predictions/LIMK1/LIMK1_logo_prob.png index ebe3593..7a83690 100644 Binary files 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-{"rm_p":"Yes","npartners_with_sites":22,"npartners":23,"central_res":"ST","nsites":84,"type":"Serine/threonine kinase","name":"LIMK2","ensp":"ENSP00000339916"} +{"rm_p":"Yes","npartners_with_sites":22,"npartners":23,"central_res":"ST","nsites":84,"type":"Serine/threonine kinase","desc":"LIM domain kinase 2","family":"TKL_LISK","name":"LIMK2","ensp":"ENSP00000339916"} diff --git a/data/predictions/LRRK1/LRRK1_logo_bits.pdf b/data/predictions/LRRK1/LRRK1_logo_bits.pdf index d3ed97f..68c9024 100644 Binary files a/data/predictions/LRRK1/LRRK1_logo_bits.pdf and b/data/predictions/LRRK1/LRRK1_logo_bits.pdf differ diff --git a/data/predictions/LRRK1/LRRK1_logo_bits.png b/data/predictions/LRRK1/LRRK1_logo_bits.png index 9b2ac94..4a9091a 100644 Binary files a/data/predictions/LRRK1/LRRK1_logo_bits.png and b/data/predictions/LRRK1/LRRK1_logo_bits.png differ diff --git a/data/predictions/LRRK1/LRRK1_logo_prob.pdf b/data/predictions/LRRK1/LRRK1_logo_prob.pdf index db7a354..d0d99a3 100644 Binary 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a/data/predictions/LRRK2/metadata.json b/data/predictions/LRRK2/metadata.json index 525cb85..3518878 100644 --- a/data/predictions/LRRK2/metadata.json +++ b/data/predictions/LRRK2/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":46,"npartners":54,"central_res":"ST","nsites":58,"type":"Serine/threonine kinase","name":"LRRK2","ensp":"ENSP00000298910"} +{"rm_p":"Yes","npartners_with_sites":46,"npartners":54,"central_res":"ST","nsites":58,"type":"Serine/threonine kinase","desc":"Leucine-rich repeat serine/threonine-protein kinase 2","family":"TKL_LRRK","name":"LRRK2","ensp":"ENSP00000298910"} diff --git a/data/predictions/LYN/LYN_logo_bits.pdf b/data/predictions/LYN/LYN_logo_bits.pdf index 5d2c0bc..87ce6b2 100644 Binary files a/data/predictions/LYN/LYN_logo_bits.pdf and b/data/predictions/LYN/LYN_logo_bits.pdf differ diff --git a/data/predictions/LYN/LYN_logo_bits.png b/data/predictions/LYN/LYN_logo_bits.png index 6b57a98..9bb47cf 100644 Binary files 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+{"rm_p":"No","npartners_with_sites":243,"npartners":291,"central_res":"Y","nsites":299,"type":"Tyrosine kinase","desc":"Tyrosine-protein kinase Lyn","family":"TK_Src","name":"LYN","ensp":"ENSP00000376688"} diff --git a/data/predictions/MAK/MAK_logo_bits.pdf b/data/predictions/MAK/MAK_logo_bits.pdf index 42d3bd5..45dd3af 100644 Binary files a/data/predictions/MAK/MAK_logo_bits.pdf and b/data/predictions/MAK/MAK_logo_bits.pdf differ diff --git a/data/predictions/MAK/MAK_logo_bits.png b/data/predictions/MAK/MAK_logo_bits.png index ab92e7e..36483c3 100644 Binary files a/data/predictions/MAK/MAK_logo_bits.png and b/data/predictions/MAK/MAK_logo_bits.png differ diff --git a/data/predictions/MAK/MAK_logo_prob.pdf b/data/predictions/MAK/MAK_logo_prob.pdf index 142c26f..3cb3d71 100644 Binary files a/data/predictions/MAK/MAK_logo_prob.pdf and b/data/predictions/MAK/MAK_logo_prob.pdf differ diff --git a/data/predictions/MAK/MAK_logo_prob.png b/data/predictions/MAK/MAK_logo_prob.png index 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-{"rm_p":"Yes","npartners_with_sites":114,"npartners":137,"central_res":"ST","nsites":133,"type":"Serine/threonine kinase","name":"MAP2K1","ensp":"ENSP00000302486"} +{"rm_p":"Yes","npartners_with_sites":114,"npartners":137,"central_res":"ST","nsites":133,"type":"Serine/threonine kinase","desc":"Dual specificity mitogen-activated protein kinase kinase 1","family":"STE_STE7","name":"MAP2K1","ensp":"ENSP00000302486"} diff --git a/data/predictions/MAP2K2/MAP2K2_logo_bits.pdf b/data/predictions/MAP2K2/MAP2K2_logo_bits.pdf index 6c9cbfd..7e379d5 100644 Binary files a/data/predictions/MAP2K2/MAP2K2_logo_bits.pdf and b/data/predictions/MAP2K2/MAP2K2_logo_bits.pdf differ diff --git a/data/predictions/MAP2K2/MAP2K2_logo_bits.png b/data/predictions/MAP2K2/MAP2K2_logo_bits.png index 3ac40d7..e104676 100644 Binary files a/data/predictions/MAP2K2/MAP2K2_logo_bits.png and b/data/predictions/MAP2K2/MAP2K2_logo_bits.png differ diff --git a/data/predictions/MAP2K2/MAP2K2_logo_prob.pdf 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protein kinase kinase 2","family":"STE_STE7","name":"MAP2K2","ensp":"ENSP00000262948"} diff --git a/data/predictions/MAP2K3/MAP2K3_logo_bits.pdf b/data/predictions/MAP2K3/MAP2K3_logo_bits.pdf index dff5915..e5fd6fb 100644 Binary files a/data/predictions/MAP2K3/MAP2K3_logo_bits.pdf and b/data/predictions/MAP2K3/MAP2K3_logo_bits.pdf differ diff --git a/data/predictions/MAP2K3/MAP2K3_logo_bits.png b/data/predictions/MAP2K3/MAP2K3_logo_bits.png index ff5b6a7..1f3fbd4 100644 Binary files a/data/predictions/MAP2K3/MAP2K3_logo_bits.png and b/data/predictions/MAP2K3/MAP2K3_logo_bits.png differ diff --git a/data/predictions/MAP2K3/MAP2K3_logo_prob.pdf b/data/predictions/MAP2K3/MAP2K3_logo_prob.pdf index b848a23..f650da5 100644 Binary files a/data/predictions/MAP2K3/MAP2K3_logo_prob.pdf and b/data/predictions/MAP2K3/MAP2K3_logo_prob.pdf differ diff --git a/data/predictions/MAP2K3/MAP2K3_logo_prob.png b/data/predictions/MAP2K3/MAP2K3_logo_prob.png index 6e43abb..c638e0d 100644 Binary files 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-{"rm_p":"Yes","npartners_with_sites":110,"npartners":135,"central_res":"ST","nsites":117,"type":"Serine/threonine kinase","name":"MAP2K4","ensp":"ENSP00000262445"} +{"rm_p":"Yes","npartners_with_sites":110,"npartners":135,"central_res":"ST","nsites":117,"type":"Serine/threonine kinase","desc":"Dual specificity mitogen-activated protein kinase kinase 4","family":"STE_STE7","name":"MAP2K4","ensp":"ENSP00000262445"} diff --git a/data/predictions/MAP2K6/MAP2K6_logo_bits.pdf b/data/predictions/MAP2K6/MAP2K6_logo_bits.pdf index 3bc5dda..3429283 100644 Binary files a/data/predictions/MAP2K6/MAP2K6_logo_bits.pdf and b/data/predictions/MAP2K6/MAP2K6_logo_bits.pdf differ diff --git a/data/predictions/MAP2K6/MAP2K6_logo_bits.png b/data/predictions/MAP2K6/MAP2K6_logo_bits.png index 26ec915..8117d2a 100644 Binary files a/data/predictions/MAP2K6/MAP2K6_logo_bits.png and b/data/predictions/MAP2K6/MAP2K6_logo_bits.png differ diff --git a/data/predictions/MAP2K6/MAP2K6_logo_prob.pdf 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protein kinase kinase 6","family":"STE_STE7","name":"MAP2K6","ensp":"ENSP00000351997"} diff --git a/data/predictions/MAP2K7/MAP2K7_logo_bits.pdf b/data/predictions/MAP2K7/MAP2K7_logo_bits.pdf index 6cd96bd..7f2787b 100644 Binary files a/data/predictions/MAP2K7/MAP2K7_logo_bits.pdf and b/data/predictions/MAP2K7/MAP2K7_logo_bits.pdf differ diff --git a/data/predictions/MAP2K7/MAP2K7_logo_bits.png b/data/predictions/MAP2K7/MAP2K7_logo_bits.png index b1ca066..f5027a2 100644 Binary files a/data/predictions/MAP2K7/MAP2K7_logo_bits.png and b/data/predictions/MAP2K7/MAP2K7_logo_bits.png differ diff --git a/data/predictions/MAP2K7/MAP2K7_logo_prob.pdf b/data/predictions/MAP2K7/MAP2K7_logo_prob.pdf index f77977e..5832a58 100644 Binary files a/data/predictions/MAP2K7/MAP2K7_logo_prob.pdf and b/data/predictions/MAP2K7/MAP2K7_logo_prob.pdf differ diff --git a/data/predictions/MAP2K7/MAP2K7_logo_prob.png b/data/predictions/MAP2K7/MAP2K7_logo_prob.png index 4f464ae..9023ace 100644 Binary files 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-{"rm_p":"Yes","npartners_with_sites":95,"npartners":113,"central_res":"ST","nsites":182,"type":"Serine/threonine kinase","name":"MAP3K1","ensp":"ENSP00000382423"} +{"rm_p":"Yes","npartners_with_sites":95,"npartners":113,"central_res":"ST","nsites":182,"type":"Serine/threonine kinase","desc":"Mitogen-activated protein kinase kinase kinase 1","family":"STE_STE11","name":"MAP3K1","ensp":"ENSP00000382423"} diff --git a/data/predictions/MAP3K11/MAP3K11_logo_bits.pdf b/data/predictions/MAP3K11/MAP3K11_logo_bits.pdf index 956b4e0..9fa3b94 100644 Binary files a/data/predictions/MAP3K11/MAP3K11_logo_bits.pdf and b/data/predictions/MAP3K11/MAP3K11_logo_bits.pdf differ diff --git a/data/predictions/MAP3K11/MAP3K11_logo_bits.png b/data/predictions/MAP3K11/MAP3K11_logo_bits.png index ded40c9..08f45ec 100644 Binary files a/data/predictions/MAP3K11/MAP3K11_logo_bits.png and b/data/predictions/MAP3K11/MAP3K11_logo_bits.png differ diff --git a/data/predictions/MAP3K11/MAP3K11_logo_prob.pdf 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protein kinase kinase kinase 11","family":"TKL_MLK","name":"MAP3K11","ensp":"ENSP00000309597"} diff --git a/data/predictions/MAP3K3/MAP3K3_logo_bits.pdf b/data/predictions/MAP3K3/MAP3K3_logo_bits.pdf index 8094433..dabf0e3 100644 Binary files a/data/predictions/MAP3K3/MAP3K3_logo_bits.pdf and b/data/predictions/MAP3K3/MAP3K3_logo_bits.pdf differ diff --git a/data/predictions/MAP3K3/MAP3K3_logo_bits.png b/data/predictions/MAP3K3/MAP3K3_logo_bits.png index 10141c4..09ada9f 100644 Binary files a/data/predictions/MAP3K3/MAP3K3_logo_bits.png and b/data/predictions/MAP3K3/MAP3K3_logo_bits.png differ diff --git a/data/predictions/MAP3K3/MAP3K3_logo_prob.pdf b/data/predictions/MAP3K3/MAP3K3_logo_prob.pdf index 17ce84f..56913e1 100644 Binary files a/data/predictions/MAP3K3/MAP3K3_logo_prob.pdf and b/data/predictions/MAP3K3/MAP3K3_logo_prob.pdf differ diff --git a/data/predictions/MAP3K3/MAP3K3_logo_prob.png b/data/predictions/MAP3K3/MAP3K3_logo_prob.png index deae917..0ef4374 100644 Binary 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-{"rm_p":"Yes","npartners_with_sites":103,"npartners":120,"central_res":"ST","nsites":115,"type":"Serine/threonine kinase","name":"MAP3K5","ensp":"ENSP00000351908"} +{"rm_p":"Yes","npartners_with_sites":103,"npartners":120,"central_res":"ST","nsites":115,"type":"Serine/threonine kinase","desc":"Mitogen-activated protein kinase kinase kinase 5","family":"STE_STE11","name":"MAP3K5","ensp":"ENSP00000351908"} diff --git a/data/predictions/MAP3K7/MAP3K7_logo_bits.pdf b/data/predictions/MAP3K7/MAP3K7_logo_bits.pdf index dbe5877..8d684a9 100644 Binary files a/data/predictions/MAP3K7/MAP3K7_logo_bits.pdf and b/data/predictions/MAP3K7/MAP3K7_logo_bits.pdf differ diff --git a/data/predictions/MAP3K7/MAP3K7_logo_bits.png b/data/predictions/MAP3K7/MAP3K7_logo_bits.png index 44b2a55..9029882 100644 Binary files a/data/predictions/MAP3K7/MAP3K7_logo_bits.png and b/data/predictions/MAP3K7/MAP3K7_logo_bits.png differ diff --git a/data/predictions/MAP3K7/MAP3K7_logo_prob.pdf 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kinase kinase 7","family":"TKL_MLK","name":"MAP3K7","ensp":"ENSP00000358335"} diff --git a/data/predictions/MAP3K8/MAP3K8_logo_bits.pdf b/data/predictions/MAP3K8/MAP3K8_logo_bits.pdf index fa61b7b..9812293 100644 Binary files a/data/predictions/MAP3K8/MAP3K8_logo_bits.pdf and b/data/predictions/MAP3K8/MAP3K8_logo_bits.pdf differ diff --git a/data/predictions/MAP3K8/MAP3K8_logo_bits.png b/data/predictions/MAP3K8/MAP3K8_logo_bits.png index 2c13a68..913dce6 100644 Binary files a/data/predictions/MAP3K8/MAP3K8_logo_bits.png and b/data/predictions/MAP3K8/MAP3K8_logo_bits.png differ diff --git a/data/predictions/MAP3K8/MAP3K8_logo_prob.pdf b/data/predictions/MAP3K8/MAP3K8_logo_prob.pdf index d65b248..f605ff9 100644 Binary files a/data/predictions/MAP3K8/MAP3K8_logo_prob.pdf and b/data/predictions/MAP3K8/MAP3K8_logo_prob.pdf differ diff --git a/data/predictions/MAP3K8/MAP3K8_logo_prob.png b/data/predictions/MAP3K8/MAP3K8_logo_prob.png index 70fdaf6..d97b3b0 100644 Binary files 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-{"rm_p":"Yes","npartners_with_sites":37,"npartners":43,"central_res":"ST","nsites":61,"type":"Serine/threonine kinase","name":"MAP4K1","ensp":"ENSP00000380066"} +{"rm_p":"Yes","npartners_with_sites":37,"npartners":43,"central_res":"ST","nsites":61,"type":"Serine/threonine kinase","desc":"Mitogen-activated protein kinase kinase kinase kinase 1","family":"STE_STE20","name":"MAP4K1","ensp":"ENSP00000380066"} diff --git a/data/predictions/MAPK1/MAPK1_logo_bits.pdf b/data/predictions/MAPK1/MAPK1_logo_bits.pdf index 85ad910..e092cd8 100644 Binary files a/data/predictions/MAPK1/MAPK1_logo_bits.pdf and b/data/predictions/MAPK1/MAPK1_logo_bits.pdf differ diff --git a/data/predictions/MAPK1/MAPK1_logo_bits.png b/data/predictions/MAPK1/MAPK1_logo_bits.png index d70b366..bcd23c4 100644 Binary files a/data/predictions/MAPK1/MAPK1_logo_bits.png and b/data/predictions/MAPK1/MAPK1_logo_bits.png differ diff --git a/data/predictions/MAPK1/MAPK1_logo_prob.pdf b/data/predictions/MAPK1/MAPK1_logo_prob.pdf 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differ diff --git a/data/predictions/MAPK10/metadata.json b/data/predictions/MAPK10/metadata.json index 2517285..d925792 100644 --- a/data/predictions/MAPK10/metadata.json +++ b/data/predictions/MAPK10/metadata.json @@ -1 +1 @@ -{"rm_p":"No","npartners_with_sites":72,"npartners":87,"central_res":"ST","nsites":452,"type":"Serine/threonine kinase","name":"MAPK10","ensp":"ENSP00000352157"} +{"rm_p":"No","npartners_with_sites":72,"npartners":87,"central_res":"ST","nsites":452,"type":"Serine/threonine kinase","desc":"Mitogen-activated protein kinase 10","family":"CMGC_MAPK","name":"MAPK10","ensp":"ENSP00000352157"} diff --git a/data/predictions/MAPK11/MAPK11_logo_bits.pdf b/data/predictions/MAPK11/MAPK11_logo_bits.pdf index c0118ee..8506bd6 100644 Binary files a/data/predictions/MAPK11/MAPK11_logo_bits.pdf and b/data/predictions/MAPK11/MAPK11_logo_bits.pdf differ diff --git a/data/predictions/MAPK11/MAPK11_logo_bits.png b/data/predictions/MAPK11/MAPK11_logo_bits.png index 59dc562..05066c6 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kinase","name":"MAPK11","ensp":"ENSP00000333685"} +{"rm_p":"No","npartners_with_sites":181,"npartners":221,"central_res":"ST","nsites":778,"type":"Serine/threonine kinase","desc":"Mitogen-activated protein kinase 11","family":"CMGC_MAPK","name":"MAPK11","ensp":"ENSP00000333685"} diff --git a/data/predictions/MAPK12/MAPK12_logo_bits.pdf b/data/predictions/MAPK12/MAPK12_logo_bits.pdf index ec7d773..aa074ea 100644 Binary files a/data/predictions/MAPK12/MAPK12_logo_bits.pdf and b/data/predictions/MAPK12/MAPK12_logo_bits.pdf differ diff --git a/data/predictions/MAPK12/MAPK12_logo_bits.png b/data/predictions/MAPK12/MAPK12_logo_bits.png index a2a6a4a..c5178e0 100644 Binary files a/data/predictions/MAPK12/MAPK12_logo_bits.png and b/data/predictions/MAPK12/MAPK12_logo_bits.png differ diff --git a/data/predictions/MAPK12/MAPK12_logo_prob.pdf b/data/predictions/MAPK12/MAPK12_logo_prob.pdf index 502d928..d0bfa99 100644 Binary files a/data/predictions/MAPK12/MAPK12_logo_prob.pdf and 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kinase","name":"MAPK14","ensp":"ENSP00000229794"} +{"rm_p":"No","npartners_with_sites":355,"npartners":435,"central_res":"ST","nsites":188,"type":"Serine/threonine kinase","desc":"Mitogen-activated protein kinase 14","family":"CMGC_MAPK","name":"MAPK14","ensp":"ENSP00000229794"} diff --git a/data/predictions/MAPK15/MAPK15_logo_bits.pdf b/data/predictions/MAPK15/MAPK15_logo_bits.pdf index 078ab19..27d35c4 100644 Binary files a/data/predictions/MAPK15/MAPK15_logo_bits.pdf and b/data/predictions/MAPK15/MAPK15_logo_bits.pdf differ diff --git a/data/predictions/MAPK15/MAPK15_logo_bits.png b/data/predictions/MAPK15/MAPK15_logo_bits.png index 59540e1..1dc334f 100644 Binary files a/data/predictions/MAPK15/MAPK15_logo_bits.png and b/data/predictions/MAPK15/MAPK15_logo_bits.png differ diff --git a/data/predictions/MAPK15/MAPK15_logo_prob.pdf b/data/predictions/MAPK15/MAPK15_logo_prob.pdf index 4763059..9c304c5 100644 Binary files a/data/predictions/MAPK15/MAPK15_logo_prob.pdf and 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+{"rm_p":"No","npartners_with_sites":23,"npartners":32,"central_res":"ST","nsites":20,"type":"Serine/threonine kinase","desc":"Mitogen-activated protein kinase 6","family":"CMGC_MAPK","name":"MAPK6","ensp":"ENSP00000261845"} diff --git a/data/predictions/MAPK7/MAPK7_logo_bits.pdf b/data/predictions/MAPK7/MAPK7_logo_bits.pdf index 22fefd2..87a8a8d 100644 Binary files a/data/predictions/MAPK7/MAPK7_logo_bits.pdf and b/data/predictions/MAPK7/MAPK7_logo_bits.pdf differ diff --git a/data/predictions/MAPK7/MAPK7_logo_bits.png b/data/predictions/MAPK7/MAPK7_logo_bits.png index 579dfd6..9baa02a 100644 Binary files a/data/predictions/MAPK7/MAPK7_logo_bits.png and b/data/predictions/MAPK7/MAPK7_logo_bits.png differ diff --git a/data/predictions/MAPK7/MAPK7_logo_prob.pdf b/data/predictions/MAPK7/MAPK7_logo_prob.pdf index b18806a..70e9303 100644 Binary files a/data/predictions/MAPK7/MAPK7_logo_prob.pdf and b/data/predictions/MAPK7/MAPK7_logo_prob.pdf differ diff --git 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9","family":"CMGC_MAPK","name":"MAPK9","ensp":"ENSP00000321410"} diff --git a/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.pdf b/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.pdf index 97a94af..aab9c12 100644 Binary files a/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.pdf and b/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.pdf differ diff --git a/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.png b/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.png index b695d54..af195ce 100644 Binary files a/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.png and b/data/predictions/MAPKAPK2/MAPKAPK2_logo_bits.png differ diff --git a/data/predictions/MAPKAPK2/MAPKAPK2_logo_prob.pdf b/data/predictions/MAPKAPK2/MAPKAPK2_logo_prob.pdf index d944797..755e782 100644 Binary files a/data/predictions/MAPKAPK2/MAPKAPK2_logo_prob.pdf and b/data/predictions/MAPKAPK2/MAPKAPK2_logo_prob.pdf differ diff --git a/data/predictions/MAPKAPK2/MAPKAPK2_logo_prob.png b/data/predictions/MAPKAPK2/MAPKAPK2_logo_prob.png index 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@@ -{"rm_p":"Yes","npartners_with_sites":22,"npartners":23,"central_res":"ST","nsites":47,"type":"Serine/threonine kinase","name":"MARK1","ensp":"ENSP00000355884"} +{"rm_p":"Yes","npartners_with_sites":22,"npartners":23,"central_res":"ST","nsites":47,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase MARK1","family":"CAMK_CAMKL","name":"MARK1","ensp":"ENSP00000355884"} diff --git a/data/predictions/MARK2/MARK2_logo_bits.pdf b/data/predictions/MARK2/MARK2_logo_bits.pdf index debd497..940d703 100644 Binary files a/data/predictions/MARK2/MARK2_logo_bits.pdf and b/data/predictions/MARK2/MARK2_logo_bits.pdf differ diff --git a/data/predictions/MARK2/MARK2_logo_bits.png b/data/predictions/MARK2/MARK2_logo_bits.png index 50052e0..2c9db78 100644 Binary files a/data/predictions/MARK2/MARK2_logo_bits.png and b/data/predictions/MARK2/MARK2_logo_bits.png differ diff --git a/data/predictions/MARK2/MARK2_logo_prob.pdf b/data/predictions/MARK2/MARK2_logo_prob.pdf index 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a/data/predictions/MARK3/metadata.json b/data/predictions/MARK3/metadata.json index 7c873ac..99415ca 100644 --- a/data/predictions/MARK3/metadata.json +++ b/data/predictions/MARK3/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":25,"npartners":34,"central_res":"ST","nsites":32,"type":"Serine/threonine kinase","name":"MARK3","ensp":"ENSP00000411397"} +{"rm_p":"Yes","npartners_with_sites":25,"npartners":34,"central_res":"ST","nsites":32,"type":"Serine/threonine kinase","desc":"MAP/microtubule affinity-regulating kinase 3","family":"CAMK_CAMKL","name":"MARK3","ensp":"ENSP00000411397"} diff --git a/data/predictions/MARK4/MARK4_logo_bits.pdf b/data/predictions/MARK4/MARK4_logo_bits.pdf index c82a1f4..b0e170f 100644 Binary files a/data/predictions/MARK4/MARK4_logo_bits.pdf and b/data/predictions/MARK4/MARK4_logo_bits.pdf differ diff --git a/data/predictions/MARK4/MARK4_logo_bits.png b/data/predictions/MARK4/MARK4_logo_bits.png index 953b516..0cdd515 100644 Binary files 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+{"rm_p":"Yes","npartners_with_sites":47,"npartners":56,"central_res":"ST","nsites":78,"type":"Serine/threonine kinase","desc":"MAP/microtubule affinity-regulating kinase 4","family":"CAMK_CAMKL","name":"MARK4","ensp":"ENSP00000300843"} diff --git a/data/predictions/MAST1/MAST1_logo_bits.pdf b/data/predictions/MAST1/MAST1_logo_bits.pdf index 509af67..aef9dfd 100644 Binary files a/data/predictions/MAST1/MAST1_logo_bits.pdf and b/data/predictions/MAST1/MAST1_logo_bits.pdf differ diff --git a/data/predictions/MAST1/MAST1_logo_bits.png b/data/predictions/MAST1/MAST1_logo_bits.png index 11efcdd..d25503d 100644 Binary files a/data/predictions/MAST1/MAST1_logo_bits.png and b/data/predictions/MAST1/MAST1_logo_bits.png differ diff --git a/data/predictions/MAST1/MAST1_logo_prob.pdf b/data/predictions/MAST1/MAST1_logo_prob.pdf index e092341..cf1c613 100644 Binary files a/data/predictions/MAST1/MAST1_logo_prob.pdf and b/data/predictions/MAST1/MAST1_logo_prob.pdf differ diff --git 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+++ b/data/predictions/MAST2/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":9,"npartners":11,"central_res":"ST","nsites":18,"type":"Serine/threonine kinase","name":"MAST2","ensp":"ENSP00000354671"} +{"rm_p":"Yes","npartners_with_sites":9,"npartners":11,"central_res":"ST","nsites":18,"type":"Serine/threonine kinase","desc":"Microtubule-associated serine/threonine-protein kinase 2","family":"AGC_MAST","name":"MAST2","ensp":"ENSP00000354671"} diff --git a/data/predictions/MASTL/MASTL_logo_bits.pdf b/data/predictions/MASTL/MASTL_logo_bits.pdf index bb6b4ec..8d476b7 100644 Binary files a/data/predictions/MASTL/MASTL_logo_bits.pdf and b/data/predictions/MASTL/MASTL_logo_bits.pdf differ diff --git a/data/predictions/MASTL/MASTL_logo_bits.png b/data/predictions/MASTL/MASTL_logo_bits.png index acb588b..0b23399 100644 Binary files a/data/predictions/MASTL/MASTL_logo_bits.png and b/data/predictions/MASTL/MASTL_logo_bits.png differ diff --git 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kinase","desc":"Serine/threonine-protein kinase greatwall","family":"AGC_MAST","name":"MASTL","ensp":"ENSP00000365113"} diff --git a/data/predictions/MELK/MELK_logo_bits.pdf b/data/predictions/MELK/MELK_logo_bits.pdf index ca9eba5..ff40e53 100644 Binary files a/data/predictions/MELK/MELK_logo_bits.pdf and b/data/predictions/MELK/MELK_logo_bits.pdf differ diff --git a/data/predictions/MELK/MELK_logo_bits.png b/data/predictions/MELK/MELK_logo_bits.png index cc1ead0..7acf70c 100644 Binary files a/data/predictions/MELK/MELK_logo_bits.png and b/data/predictions/MELK/MELK_logo_bits.png differ diff --git a/data/predictions/MELK/MELK_logo_prob.pdf b/data/predictions/MELK/MELK_logo_prob.pdf index b54f13f..74aab28 100644 Binary files a/data/predictions/MELK/MELK_logo_prob.pdf and b/data/predictions/MELK/MELK_logo_prob.pdf differ diff --git a/data/predictions/MELK/MELK_logo_prob.png b/data/predictions/MELK/MELK_logo_prob.png index 0ac7a91..6f48e5f 100644 Binary files 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+{"rm_p":"No","npartners_with_sites":163,"npartners":217,"central_res":"Y","nsites":80,"type":"Tyrosine kinase","desc":"Hepatocyte growth factor receptor","family":"TK_Met","name":"MET","ensp":"ENSP00000317272"} diff --git a/data/predictions/MINK1/MINK1_logo_bits.pdf b/data/predictions/MINK1/MINK1_logo_bits.pdf index e2d51ba..677120f 100644 Binary files a/data/predictions/MINK1/MINK1_logo_bits.pdf and b/data/predictions/MINK1/MINK1_logo_bits.pdf differ diff --git a/data/predictions/MINK1/MINK1_logo_bits.png b/data/predictions/MINK1/MINK1_logo_bits.png index d502964..67d113c 100644 Binary files a/data/predictions/MINK1/MINK1_logo_bits.png and b/data/predictions/MINK1/MINK1_logo_bits.png differ diff --git a/data/predictions/MINK1/MINK1_logo_prob.pdf b/data/predictions/MINK1/MINK1_logo_prob.pdf index 780a785..3627f92 100644 Binary files a/data/predictions/MINK1/MINK1_logo_prob.pdf and b/data/predictions/MINK1/MINK1_logo_prob.pdf differ diff --git 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a/data/predictions/MLTK/MLTK_data.tsv +++ /dev/null @@ -1,39 +0,0 @@ -name MLTK -id ENSP00000364361 -type Serine/threonine kinase -proline+1_removed Yes -npartners 23 -npartners_with_sites 16 -nsites 27 -// -motif score fg_matches fg_size bg_matches bg_size fold_increase -....R[ST]..... 6.18 27 191 456 9422 2.92 -// -prot_id prot_name position flank kinase source string_score -ENSP00000265724 ABCB1 263 LAAIRTVIAFG psite 659 -ENSP00000265724 ABCB1 667 LIRKRSTRRSV PRKACA;PRKCA hprd;pelm;psite 659 -ENSP00000265724 ABCB1 671 RSTRRSVRGSQ PRKACA;PRKCA hprd;pelm;psite 659 -ENSP00000278616 ATM 569 CEVNRSFSLKE psite 804 -ENSP00000278616 ATM 1883 SQTSRSTTPAN psite 804 -ENSP00000365198 KAZN 344 SPRHRTHSLCN psite 411 -ENSP00000262445 MAP2K4 78 IERLRTHSIES psite 664 -ENSP00000381066 MAP2K7 86 LFTPRSMESIE hprd;psite 974 -ENSP00000343325 PKN1 75 TDLGRSLGPVE psite 960 -ENSP00000343325 PKN1 378 GLYSRSGSLSG PKN1 hprd;psite 960 -ENSP00000343325 PKN1 385 SLSGRSSLKAE psite 960 -ENSP00000343325 PKN1 778 GYGDRTSTFCG hprd;psite 960 -ENSP00000364133 TGFBR1 200 LLVQRTIARTI psite 621 -ENSP00000364133 TGFBR1 204 RTIARTIVLQE psite 621 -ENSP00000281537 TJP1 141 IHDPRSGRSGV psite 800 -ENSP00000281537 TJP1 144 PRSGRSGVVNR psite 800 -ENSP00000281537 TJP1 151 VVNRRSEKIWP psite 800 -ENSP00000281537 TJP1 160 WPRDRSASRER psite 800 -ENSP00000281537 TJP1 166 ASRERSLSPRS hprd;pelm;psite 800 -ENSP00000281537 TJP1 175 RSDRRSVASSQ hprd;psite 800 -ENSP00000281537 TJP1 313 PRRSRSRSPDQ psite 800 -ENSP00000281537 TJP1 340 NGSLRSRDEER psite 800 -ENSP00000281537 TJP1 1198 EQYSRSYEQVP psite 800 -ENSP00000281537 TJP1 1366 YFDRRSFENKP hprd;pelm;psite 800 -ENSP00000281537 TJP1 1413 DGVDRSFGEKR psite 800 -ENSP00000265724 ABCB1 660 SNDSRSSLIRK hprd;pelm 659 -ENSP00000281537 TJP1 877 SAITRSSEPVR hprd 800 diff --git a/data/predictions/MLTK/MLTK_logo_bits.png b/data/predictions/MLTK/MLTK_logo_bits.png deleted file mode 100644 index 00bb53a..0000000 Binary files a/data/predictions/MLTK/MLTK_logo_bits.png and /dev/null differ diff --git a/data/predictions/MLTK/MLTK_logo_prob.png b/data/predictions/MLTK/MLTK_logo_prob.png deleted file mode 100644 index 4a51920..0000000 Binary files a/data/predictions/MLTK/MLTK_logo_prob.png and /dev/null differ diff --git a/data/predictions/MLTK/metadata.json b/data/predictions/MLTK/metadata.json deleted file mode 100644 index 8413947..0000000 --- a/data/predictions/MLTK/metadata.json +++ /dev/null @@ -1 +0,0 @@ -{"rm_p":"Yes","npartners_with_sites":16,"npartners":23,"central_res":"ST","nsites":27,"type":"Serine/threonine kinase","name":"MLTK","ensp":"ENSP00000364361"} diff --git a/data/predictions/MLTK/motifs.json b/data/predictions/MLTK/motifs.json deleted file mode 100644 index e97583a..0000000 --- a/data/predictions/MLTK/motifs.json +++ /dev/null @@ -1 +0,0 @@ -[{"motif":"....R[ST].....","score":6.18,"fg_matches":27,"fg_size":191,"bg_matches":456,"bg_size":9422,"fold_increase":2.92}] diff --git a/data/predictions/MLTK/sites.json b/data/predictions/MLTK/sites.json deleted file mode 100644 index 58c4c89..0000000 --- a/data/predictions/MLTK/sites.json +++ /dev/null @@ -1 +0,0 @@ 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index bbaf384..5481cce 100644 --- a/data/predictions/MOK/metadata.json +++ b/data/predictions/MOK/metadata.json @@ -1 +1 @@ -{"rm_p":"No","npartners_with_sites":11,"npartners":19,"central_res":"ST","nsites":21,"type":"Serine/threonine kinase","name":"MOK","ensp":"ENSP00000355304"} +{"rm_p":"No","npartners_with_sites":11,"npartners":19,"central_res":"ST","nsites":21,"type":"Serine/threonine kinase","desc":"MAPK/MAK/MRK overlapping kinase","family":"CMGC_MOK","name":"MOK","ensp":"ENSP00000355304"} diff --git a/data/predictions/MST4/MST4_logo_bits.pdf b/data/predictions/MST4/MST4_logo_bits.pdf deleted file mode 100644 index 766dd28..0000000 Binary files a/data/predictions/MST4/MST4_logo_bits.pdf and /dev/null differ diff --git a/data/predictions/MST4/MST4_logo_bits.png b/data/predictions/MST4/MST4_logo_bits.png deleted file mode 100644 index 000c170..0000000 Binary files a/data/predictions/MST4/MST4_logo_bits.png and /dev/null differ diff --git a/data/predictions/MST4/MST4_logo_prob.pdf 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58a0e9b..c8aa1a7 100644 --- a/data/predictions/MYLK/metadata.json +++ b/data/predictions/MYLK/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":99,"npartners":116,"central_res":"ST","nsites":237,"type":"Serine/threonine kinase","name":"MYLK","ensp":"ENSP00000353452"} +{"rm_p":"Yes","npartners_with_sites":99,"npartners":116,"central_res":"ST","nsites":237,"type":"Serine/threonine kinase","desc":"Myosin light chain kinase, smooth muscle","family":"CAMK_MLCK","name":"MYLK","ensp":"ENSP00000353452"} diff --git a/data/predictions/MYO3A/MYO3A_logo_bits.pdf b/data/predictions/MYO3A/MYO3A_logo_bits.pdf index 023623a..86cd2e2 100644 Binary files a/data/predictions/MYO3A/MYO3A_logo_bits.pdf and b/data/predictions/MYO3A/MYO3A_logo_bits.pdf differ diff --git a/data/predictions/MYO3A/MYO3A_logo_bits.png b/data/predictions/MYO3A/MYO3A_logo_bits.png index 0824201..d224783 100644 Binary files a/data/predictions/MYO3A/MYO3A_logo_bits.png and b/data/predictions/MYO3A/MYO3A_logo_bits.png 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kinase","desc":"Myosin-IIIa","family":"STE_STE20","name":"MYO3A","ensp":"ENSP00000265944"} diff --git a/data/predictions/NEK1/NEK1_logo_bits.pdf b/data/predictions/NEK1/NEK1_logo_bits.pdf index 9a37c69..7a35d0d 100644 Binary files a/data/predictions/NEK1/NEK1_logo_bits.pdf and b/data/predictions/NEK1/NEK1_logo_bits.pdf differ diff --git a/data/predictions/NEK1/NEK1_logo_bits.png b/data/predictions/NEK1/NEK1_logo_bits.png index 1eca3f3..17e018f 100644 Binary files a/data/predictions/NEK1/NEK1_logo_bits.png and b/data/predictions/NEK1/NEK1_logo_bits.png differ diff --git a/data/predictions/NEK1/NEK1_logo_prob.pdf b/data/predictions/NEK1/NEK1_logo_prob.pdf index 296405e..e64c620 100644 Binary files a/data/predictions/NEK1/NEK1_logo_prob.pdf and b/data/predictions/NEK1/NEK1_logo_prob.pdf differ diff --git a/data/predictions/NEK1/NEK1_logo_prob.png b/data/predictions/NEK1/NEK1_logo_prob.png index 7c4cb79..17a7da5 100644 Binary files a/data/predictions/NEK1/NEK1_logo_prob.png and 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+{"rm_p":"Yes","npartners_with_sites":243,"npartners":276,"central_res":"ST","nsites":198,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase Nek2","family":"Other_NEK","name":"NEK2","ensp":"ENSP00000355966"} diff --git a/data/predictions/NEK9/NEK9_logo_bits.pdf b/data/predictions/NEK9/NEK9_logo_bits.pdf index b412621..18289f4 100644 Binary files a/data/predictions/NEK9/NEK9_logo_bits.pdf and b/data/predictions/NEK9/NEK9_logo_bits.pdf differ diff --git a/data/predictions/NEK9/NEK9_logo_bits.png b/data/predictions/NEK9/NEK9_logo_bits.png index 3ebbb22..d33c208 100644 Binary files a/data/predictions/NEK9/NEK9_logo_bits.png and b/data/predictions/NEK9/NEK9_logo_bits.png differ diff --git a/data/predictions/NEK9/NEK9_logo_prob.pdf b/data/predictions/NEK9/NEK9_logo_prob.pdf index de5a3a0..180b316 100644 Binary files a/data/predictions/NEK9/NEK9_logo_prob.pdf and b/data/predictions/NEK9/NEK9_logo_prob.pdf differ diff --git a/data/predictions/NEK9/NEK9_logo_prob.png 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-{"rm_p":"No","npartners_with_sites":35,"npartners":41,"central_res":"ST","nsites":151,"type":"Serine/threonine kinase","name":"NLK","ensp":"ENSP00000384625"} +{"rm_p":"No","npartners_with_sites":35,"npartners":41,"central_res":"ST","nsites":151,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase NLK","family":"CMGC_MAPK","name":"NLK","ensp":"ENSP00000384625"} diff --git a/data/predictions/NPR1/NPR1_logo_bits.pdf b/data/predictions/NPR1/NPR1_logo_bits.pdf index ad34d39..da11bb1 100644 Binary files a/data/predictions/NPR1/NPR1_logo_bits.pdf and b/data/predictions/NPR1/NPR1_logo_bits.pdf differ diff --git a/data/predictions/NPR1/NPR1_logo_bits.png b/data/predictions/NPR1/NPR1_logo_bits.png index ce512b6..6f7db39 100644 Binary files a/data/predictions/NPR1/NPR1_logo_bits.png and b/data/predictions/NPR1/NPR1_logo_bits.png differ diff --git a/data/predictions/NPR1/NPR1_logo_prob.pdf b/data/predictions/NPR1/NPR1_logo_prob.pdf index 04875af..a8065f3 100644 Binary files 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receptor-binding protein","family":"Other_NRBP","name":"NRBP1","ensp":"ENSP00000233557"} diff --git a/data/predictions/NTRK1/NTRK1_logo_bits.pdf b/data/predictions/NTRK1/NTRK1_logo_bits.pdf index 1bf766f..009fe23 100644 Binary files a/data/predictions/NTRK1/NTRK1_logo_bits.pdf and b/data/predictions/NTRK1/NTRK1_logo_bits.pdf differ diff --git a/data/predictions/NTRK1/NTRK1_logo_bits.png b/data/predictions/NTRK1/NTRK1_logo_bits.png index 813c2ac..ef5b03c 100644 Binary files a/data/predictions/NTRK1/NTRK1_logo_bits.png and b/data/predictions/NTRK1/NTRK1_logo_bits.png differ diff --git a/data/predictions/NTRK1/NTRK1_logo_prob.pdf b/data/predictions/NTRK1/NTRK1_logo_prob.pdf index ca75d65..d62316d 100644 Binary files a/data/predictions/NTRK1/NTRK1_logo_prob.pdf and b/data/predictions/NTRK1/NTRK1_logo_prob.pdf differ diff --git a/data/predictions/NTRK1/NTRK1_logo_prob.png b/data/predictions/NTRK1/NTRK1_logo_prob.png index f96895a..9a943a2 100644 Binary files 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kinase","name":"NTRK2","ensp":"ENSP00000277120"} +{"rm_p":"No","npartners_with_sites":47,"npartners":59,"central_res":"Y","nsites":13,"type":"Tyrosine kinase","desc":"BDNF/NT-3 growth factors receptor","family":"TK_Trk","name":"NTRK2","ensp":"ENSP00000277120"} diff --git a/data/predictions/NTRK3/NTRK3_logo_bits.pdf b/data/predictions/NTRK3/NTRK3_logo_bits.pdf index 17d67f1..823ebe4 100644 Binary files a/data/predictions/NTRK3/NTRK3_logo_bits.pdf and b/data/predictions/NTRK3/NTRK3_logo_bits.pdf differ diff --git a/data/predictions/NTRK3/NTRK3_logo_bits.png b/data/predictions/NTRK3/NTRK3_logo_bits.png index 334eb43..fb98caf 100644 Binary files a/data/predictions/NTRK3/NTRK3_logo_bits.png and b/data/predictions/NTRK3/NTRK3_logo_bits.png differ diff --git a/data/predictions/NTRK3/NTRK3_logo_prob.pdf b/data/predictions/NTRK3/NTRK3_logo_prob.pdf index 61f31d6..629bd19 100644 Binary files a/data/predictions/NTRK3/NTRK3_logo_prob.pdf and b/data/predictions/NTRK3/NTRK3_logo_prob.pdf differ diff 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OSR1","family":"STE_STE20","name":"OXSR1","ensp":"ENSP00000311713"} diff --git a/data/predictions/PAK1/PAK1_logo_bits.pdf b/data/predictions/PAK1/PAK1_logo_bits.pdf index e63b514..ade3ca6 100644 Binary files a/data/predictions/PAK1/PAK1_logo_bits.pdf and b/data/predictions/PAK1/PAK1_logo_bits.pdf differ diff --git a/data/predictions/PAK1/PAK1_logo_bits.png b/data/predictions/PAK1/PAK1_logo_bits.png index f7cfb28..0fc58a2 100644 Binary files a/data/predictions/PAK1/PAK1_logo_bits.png and b/data/predictions/PAK1/PAK1_logo_bits.png differ diff --git a/data/predictions/PAK1/PAK1_logo_prob.pdf b/data/predictions/PAK1/PAK1_logo_prob.pdf index 8e29aa0..c0ce751 100644 Binary files a/data/predictions/PAK1/PAK1_logo_prob.pdf and b/data/predictions/PAK1/PAK1_logo_prob.pdf differ diff --git a/data/predictions/PAK1/PAK1_logo_prob.png b/data/predictions/PAK1/PAK1_logo_prob.png index f433f09..95579fd 100644 Binary files a/data/predictions/PAK1/PAK1_logo_prob.png and 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+{"rm_p":"Yes","npartners_with_sites":133,"npartners":147,"central_res":"ST","nsites":217,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase PAK 2","family":"STE_STE20","name":"PAK2","ensp":"ENSP00000314067"} diff --git a/data/predictions/PAK3/PAK3_logo_bits.pdf b/data/predictions/PAK3/PAK3_logo_bits.pdf index 8565804..d3a3de9 100644 Binary files a/data/predictions/PAK3/PAK3_logo_bits.pdf and b/data/predictions/PAK3/PAK3_logo_bits.pdf differ diff --git a/data/predictions/PAK3/PAK3_logo_bits.png b/data/predictions/PAK3/PAK3_logo_bits.png index a60be2a..bc9805d 100644 Binary files a/data/predictions/PAK3/PAK3_logo_bits.png and b/data/predictions/PAK3/PAK3_logo_bits.png differ diff --git a/data/predictions/PAK3/PAK3_logo_prob.pdf b/data/predictions/PAK3/PAK3_logo_prob.pdf index a59120b..4e6b314 100644 Binary files a/data/predictions/PAK3/PAK3_logo_prob.pdf and b/data/predictions/PAK3/PAK3_logo_prob.pdf differ diff --git a/data/predictions/PAK3/PAK3_logo_prob.png 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-{"rm_p":"Yes","npartners_with_sites":38,"npartners":47,"central_res":"ST","nsites":74,"type":"Serine/threonine kinase","name":"PAK4","ensp":"ENSP00000351049"} +{"rm_p":"Yes","npartners_with_sites":38,"npartners":47,"central_res":"ST","nsites":74,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase PAK 4","family":"STE_STE20","name":"PAK4","ensp":"ENSP00000351049"} diff --git a/data/predictions/PAK6/PAK6_logo_bits.pdf b/data/predictions/PAK6/PAK6_logo_bits.pdf index 1480cd3..b1e90da 100644 Binary files a/data/predictions/PAK6/PAK6_logo_bits.pdf and b/data/predictions/PAK6/PAK6_logo_bits.pdf differ diff --git a/data/predictions/PAK6/PAK6_logo_bits.png b/data/predictions/PAK6/PAK6_logo_bits.png index b2c5935..153d83f 100644 Binary files a/data/predictions/PAK6/PAK6_logo_bits.png and b/data/predictions/PAK6/PAK6_logo_bits.png differ diff --git a/data/predictions/PAK6/PAK6_logo_prob.pdf b/data/predictions/PAK6/PAK6_logo_prob.pdf index f284a2e..cebfda1 100644 Binary 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e33060f..a396feb 100644 --- a/data/predictions/PAK7/metadata.json +++ b/data/predictions/PAK7/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":22,"npartners":30,"central_res":"ST","nsites":38,"type":"Serine/threonine kinase","name":"PAK7","ensp":"ENSP00000322957"} +{"rm_p":"Yes","npartners_with_sites":22,"npartners":30,"central_res":"ST","nsites":38,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase PAK 7","family":"STE_STE20","name":"PAK7","ensp":"ENSP00000322957"} diff --git a/data/predictions/PASK/PASK_logo_bits.pdf b/data/predictions/PASK/PASK_logo_bits.pdf index 65a2d5e..95e08fc 100644 Binary files a/data/predictions/PASK/PASK_logo_bits.pdf and b/data/predictions/PASK/PASK_logo_bits.pdf differ diff --git a/data/predictions/PASK/PASK_logo_bits.png b/data/predictions/PASK/PASK_logo_bits.png index 87f1d07..37e7bb2 100644 Binary files a/data/predictions/PASK/PASK_logo_bits.png and b/data/predictions/PASK/PASK_logo_bits.png differ diff --git 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serine/threonine-protein kinase","family":"CAMK_CAMKL","name":"PASK","ensp":"ENSP00000234040"} diff --git a/data/predictions/PBK/PBK_logo_bits.pdf b/data/predictions/PBK/PBK_logo_bits.pdf index ef48a37..f2d76ff 100644 Binary files a/data/predictions/PBK/PBK_logo_bits.pdf and b/data/predictions/PBK/PBK_logo_bits.pdf differ diff --git a/data/predictions/PBK/PBK_logo_bits.png b/data/predictions/PBK/PBK_logo_bits.png index 6cb7436..24e9075 100644 Binary files a/data/predictions/PBK/PBK_logo_bits.png and b/data/predictions/PBK/PBK_logo_bits.png differ diff --git a/data/predictions/PBK/PBK_logo_prob.pdf b/data/predictions/PBK/PBK_logo_prob.pdf index e9d1d13..6e09840 100644 Binary files a/data/predictions/PBK/PBK_logo_prob.pdf and b/data/predictions/PBK/PBK_logo_prob.pdf differ diff --git a/data/predictions/PBK/PBK_logo_prob.png b/data/predictions/PBK/PBK_logo_prob.png index 8019b08..d80ce69 100644 Binary files a/data/predictions/PBK/PBK_logo_prob.png and 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-{"rm_p":"No","npartners_with_sites":88,"npartners":124,"central_res":"Y","nsites":56,"type":"Tyrosine kinase","name":"PDGFRA","ensp":"ENSP00000257290"} +{"rm_p":"No","npartners_with_sites":88,"npartners":124,"central_res":"Y","nsites":56,"type":"Tyrosine kinase","desc":"Platelet-derived growth factor receptor alpha","family":"TK_PDGFR","name":"PDGFRA","ensp":"ENSP00000257290"} diff --git a/data/predictions/PDGFRB/PDGFRB_logo_bits.pdf b/data/predictions/PDGFRB/PDGFRB_logo_bits.pdf index fc0e9b8..210c208 100644 Binary files a/data/predictions/PDGFRB/PDGFRB_logo_bits.pdf and b/data/predictions/PDGFRB/PDGFRB_logo_bits.pdf differ diff --git a/data/predictions/PDGFRB/PDGFRB_logo_bits.png b/data/predictions/PDGFRB/PDGFRB_logo_bits.png index e27caae..fb80144 100644 Binary files a/data/predictions/PDGFRB/PDGFRB_logo_bits.png and b/data/predictions/PDGFRB/PDGFRB_logo_bits.png differ diff --git a/data/predictions/PDGFRB/PDGFRB_logo_prob.pdf b/data/predictions/PDGFRB/PDGFRB_logo_prob.pdf index 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diff --git a/data/predictions/PDK1/PDK1_logo_bits.pdf b/data/predictions/PDK1/PDK1_logo_bits.pdf index d12d29b..ecfc549 100644 Binary files a/data/predictions/PDK1/PDK1_logo_bits.pdf and b/data/predictions/PDK1/PDK1_logo_bits.pdf differ diff --git a/data/predictions/PDK1/PDK1_logo_bits.png b/data/predictions/PDK1/PDK1_logo_bits.png index 8ee0cb7..6d7417d 100644 Binary files a/data/predictions/PDK1/PDK1_logo_bits.png and b/data/predictions/PDK1/PDK1_logo_bits.png differ diff --git a/data/predictions/PDK1/PDK1_logo_prob.pdf b/data/predictions/PDK1/PDK1_logo_prob.pdf index 2aea3b9..7da33c7 100644 Binary files a/data/predictions/PDK1/PDK1_logo_prob.pdf and b/data/predictions/PDK1/PDK1_logo_prob.pdf differ diff --git a/data/predictions/PDK1/PDK1_logo_prob.png b/data/predictions/PDK1/PDK1_logo_prob.png index b81f1c4..387e2d1 100644 Binary files a/data/predictions/PDK1/PDK1_logo_prob.png and b/data/predictions/PDK1/PDK1_logo_prob.png differ diff --git a/data/predictions/PDK1/metadata.json 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+{"rm_p":"Yes","npartners_with_sites":35,"npartners":40,"central_res":"ST","nsites":56,"type":"Serine/threonine kinase","desc":"[Pyruvate dehydrogenase","family":"Atypical_PDHK","name":"PDK2","ensp":"ENSP00000007708"} diff --git a/data/predictions/PDK3/PDK3_logo_bits.pdf b/data/predictions/PDK3/PDK3_logo_bits.pdf index 2803256..124b4b0 100644 Binary files a/data/predictions/PDK3/PDK3_logo_bits.pdf and b/data/predictions/PDK3/PDK3_logo_bits.pdf differ diff --git a/data/predictions/PDK3/PDK3_logo_bits.png b/data/predictions/PDK3/PDK3_logo_bits.png index 1781822..06c5f50 100644 Binary files a/data/predictions/PDK3/PDK3_logo_bits.png and b/data/predictions/PDK3/PDK3_logo_bits.png differ diff --git a/data/predictions/PDK3/PDK3_logo_prob.pdf b/data/predictions/PDK3/PDK3_logo_prob.pdf index 9a9c895..2422d0b 100644 Binary files a/data/predictions/PDK3/PDK3_logo_prob.pdf and b/data/predictions/PDK3/PDK3_logo_prob.pdf differ diff --git a/data/predictions/PDK3/PDK3_logo_prob.png 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@@ -{"rm_p":"Yes","npartners_with_sites":56,"npartners":63,"central_res":"ST","nsites":99,"type":"Serine/threonine kinase","name":"PDPK1","ensp":"ENSP00000344220"} +{"rm_p":"Yes","npartners_with_sites":56,"npartners":63,"central_res":"ST","nsites":99,"type":"Serine/threonine kinase","desc":"3-phosphoinositide-dependent protein kinase 1","family":"AGC_PDK1","name":"PDPK1","ensp":"ENSP00000344220"} diff --git a/data/predictions/PIK3C3/PIK3C3_logo_bits.pdf b/data/predictions/PIK3C3/PIK3C3_logo_bits.pdf index 36f1b73..e81f16a 100644 Binary files a/data/predictions/PIK3C3/PIK3C3_logo_bits.pdf and b/data/predictions/PIK3C3/PIK3C3_logo_bits.pdf differ diff --git a/data/predictions/PIK3C3/PIK3C3_logo_bits.png b/data/predictions/PIK3C3/PIK3C3_logo_bits.png index a50adaa..4d7d439 100644 Binary files a/data/predictions/PIK3C3/PIK3C3_logo_bits.png and b/data/predictions/PIK3C3/PIK3C3_logo_bits.png differ diff --git a/data/predictions/PIK3C3/PIK3C3_logo_prob.pdf 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subunit type 3","family":"PKL_PIK","name":"PIK3C3","ensp":"ENSP00000262039"} diff --git a/data/predictions/PIK3CA/PIK3CA_logo_bits.pdf b/data/predictions/PIK3CA/PIK3CA_logo_bits.pdf index 50c2cf4..a55b314 100644 Binary files a/data/predictions/PIK3CA/PIK3CA_logo_bits.pdf and b/data/predictions/PIK3CA/PIK3CA_logo_bits.pdf differ diff --git a/data/predictions/PIK3CA/PIK3CA_logo_bits.png b/data/predictions/PIK3CA/PIK3CA_logo_bits.png index 8cf52a6..7fc59ba 100644 Binary files a/data/predictions/PIK3CA/PIK3CA_logo_bits.png and b/data/predictions/PIK3CA/PIK3CA_logo_bits.png differ diff --git a/data/predictions/PIK3CA/PIK3CA_logo_prob.pdf b/data/predictions/PIK3CA/PIK3CA_logo_prob.pdf index 19cabd3..7b188e4 100644 Binary files a/data/predictions/PIK3CA/PIK3CA_logo_prob.pdf and b/data/predictions/PIK3CA/PIK3CA_logo_prob.pdf differ diff --git a/data/predictions/PIK3CA/PIK3CA_logo_prob.png b/data/predictions/PIK3CA/PIK3CA_logo_prob.png index 6a6786c..50d92f8 100644 Binary files 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b/data/predictions/PIK3CB/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":248,"npartners":300,"central_res":"ST","nsites":469,"type":"Serine/threonine kinase","name":"PIK3CB","ensp":"ENSP00000289153"} +{"rm_p":"Yes","npartners_with_sites":248,"npartners":300,"central_res":"ST","nsites":469,"type":"Serine/threonine kinase","desc":"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform","family":"PKL_PIK","name":"PIK3CB","ensp":"ENSP00000289153"} diff --git a/data/predictions/PIK3CD/PIK3CD_logo_bits.pdf b/data/predictions/PIK3CD/PIK3CD_logo_bits.pdf index d52be88..8517ba4 100644 Binary files a/data/predictions/PIK3CD/PIK3CD_logo_bits.pdf and b/data/predictions/PIK3CD/PIK3CD_logo_bits.pdf differ diff --git a/data/predictions/PIK3CD/PIK3CD_logo_bits.png b/data/predictions/PIK3CD/PIK3CD_logo_bits.png index dbd2a8d..938ef2c 100644 Binary files a/data/predictions/PIK3CD/PIK3CD_logo_bits.png and b/data/predictions/PIK3CD/PIK3CD_logo_bits.png differ diff 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+{"rm_p":"Yes","npartners_with_sites":230,"npartners":281,"central_res":"ST","nsites":438,"type":"Serine/threonine kinase","desc":"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform","family":"PKL_PIK","name":"PIK3CD","ensp":"ENSP00000366563"} diff --git a/data/predictions/PIK3CG/PIK3CG_logo_bits.pdf b/data/predictions/PIK3CG/PIK3CG_logo_bits.pdf index d1ca3a3..69c408c 100644 Binary files a/data/predictions/PIK3CG/PIK3CG_logo_bits.pdf and b/data/predictions/PIK3CG/PIK3CG_logo_bits.pdf differ diff --git a/data/predictions/PIK3CG/PIK3CG_logo_bits.png b/data/predictions/PIK3CG/PIK3CG_logo_bits.png index debefcc..d5b7555 100644 Binary files a/data/predictions/PIK3CG/PIK3CG_logo_bits.png and b/data/predictions/PIK3CG/PIK3CG_logo_bits.png differ diff --git a/data/predictions/PIK3CG/PIK3CG_logo_prob.pdf b/data/predictions/PIK3CG/PIK3CG_logo_prob.pdf index 0a17388..39ba942 100644 Binary files a/data/predictions/PIK3CG/PIK3CG_logo_prob.pdf and 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+{"rm_p":"Yes","npartners_with_sites":64,"npartners":86,"central_res":"ST","nsites":180,"type":"Serine/threonine kinase","desc":"Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase","family":"Other_WEE","name":"PKMYT1","ensp":"ENSP00000262300"} diff --git a/data/predictions/PKN1/PKN1_logo_bits.pdf b/data/predictions/PKN1/PKN1_logo_bits.pdf index f839ca9..e449dbe 100644 Binary files a/data/predictions/PKN1/PKN1_logo_bits.pdf and b/data/predictions/PKN1/PKN1_logo_bits.pdf differ diff --git a/data/predictions/PKN1/PKN1_logo_bits.png b/data/predictions/PKN1/PKN1_logo_bits.png index 7a1bd7d..b5e9c57 100644 Binary files a/data/predictions/PKN1/PKN1_logo_bits.png and b/data/predictions/PKN1/PKN1_logo_bits.png differ diff --git a/data/predictions/PKN1/PKN1_logo_prob.pdf b/data/predictions/PKN1/PKN1_logo_prob.pdf index 21ce9dc..2df4d18 100644 Binary files a/data/predictions/PKN1/PKN1_logo_prob.pdf and b/data/predictions/PKN1/PKN1_logo_prob.pdf differ diff --git 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PLK1","family":"Other_PLK","name":"PLK1","ensp":"ENSP00000300093"} diff --git a/data/predictions/PLK2/PLK2_logo_bits.pdf b/data/predictions/PLK2/PLK2_logo_bits.pdf index 6921e07..943b4cc 100644 Binary files a/data/predictions/PLK2/PLK2_logo_bits.pdf and b/data/predictions/PLK2/PLK2_logo_bits.pdf differ diff --git a/data/predictions/PLK2/PLK2_logo_bits.png b/data/predictions/PLK2/PLK2_logo_bits.png index 731d56e..d4513ec 100644 Binary files a/data/predictions/PLK2/PLK2_logo_bits.png and b/data/predictions/PLK2/PLK2_logo_bits.png differ diff --git a/data/predictions/PLK2/PLK2_logo_prob.pdf b/data/predictions/PLK2/PLK2_logo_prob.pdf index c78fdd8..4c34d22 100644 Binary files a/data/predictions/PLK2/PLK2_logo_prob.pdf and b/data/predictions/PLK2/PLK2_logo_prob.pdf differ diff --git a/data/predictions/PLK2/PLK2_logo_prob.png b/data/predictions/PLK2/PLK2_logo_prob.png index d9fa3c4..5116ba6 100644 Binary files a/data/predictions/PLK2/PLK2_logo_prob.png and 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+{"rm_p":"Yes","npartners_with_sites":110,"npartners":130,"central_res":"ST","nsites":134,"type":"Serine/threonine kinase","desc":"cAMP-dependent protein kinase catalytic subunit gamma","family":"AGC_PKA","name":"PRKACG","ensp":"ENSP00000366488"} diff --git a/data/predictions/PRKCA/PRKCA_logo_bits.pdf b/data/predictions/PRKCA/PRKCA_logo_bits.pdf index a3ee6ff..4ddf75b 100644 Binary files a/data/predictions/PRKCA/PRKCA_logo_bits.pdf and b/data/predictions/PRKCA/PRKCA_logo_bits.pdf differ diff --git a/data/predictions/PRKCA/PRKCA_logo_bits.png b/data/predictions/PRKCA/PRKCA_logo_bits.png index 0ca58e7..fd5f2f0 100644 Binary files a/data/predictions/PRKCA/PRKCA_logo_bits.png and b/data/predictions/PRKCA/PRKCA_logo_bits.png differ diff --git a/data/predictions/PRKCA/PRKCA_logo_prob.pdf b/data/predictions/PRKCA/PRKCA_logo_prob.pdf index b21aaa4..5df9598 100644 Binary files a/data/predictions/PRKCA/PRKCA_logo_prob.pdf and b/data/predictions/PRKCA/PRKCA_logo_prob.pdf differ diff --git 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type","family":"AGC_PKC","name":"PRKCD","ensp":"ENSP00000331602"} diff --git a/data/predictions/PRKCE/PRKCE_logo_bits.pdf b/data/predictions/PRKCE/PRKCE_logo_bits.pdf index 677f8aa..7784f39 100644 Binary files a/data/predictions/PRKCE/PRKCE_logo_bits.pdf and b/data/predictions/PRKCE/PRKCE_logo_bits.pdf differ diff --git a/data/predictions/PRKCE/PRKCE_logo_bits.png b/data/predictions/PRKCE/PRKCE_logo_bits.png index fd6e763..e3b84a7 100644 Binary files a/data/predictions/PRKCE/PRKCE_logo_bits.png and b/data/predictions/PRKCE/PRKCE_logo_bits.png differ diff --git a/data/predictions/PRKCE/PRKCE_logo_prob.pdf b/data/predictions/PRKCE/PRKCE_logo_prob.pdf index 45e7ecf..c4838a1 100644 Binary files a/data/predictions/PRKCE/PRKCE_logo_prob.pdf and b/data/predictions/PRKCE/PRKCE_logo_prob.pdf differ diff --git a/data/predictions/PRKCE/PRKCE_logo_prob.png b/data/predictions/PRKCE/PRKCE_logo_prob.png index 498032b..03283a8 100644 Binary files a/data/predictions/PRKCE/PRKCE_logo_prob.png and 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kinase","name":"PRKCG","ensp":"ENSP00000263431"} +{"rm_p":"Yes","npartners_with_sites":139,"npartners":163,"central_res":"ST","nsites":472,"type":"Serine/threonine kinase","desc":"Protein kinase C gamma type","family":"AGC_PKC","name":"PRKCG","ensp":"ENSP00000263431"} diff --git a/data/predictions/PRKCH/PRKCH_logo_bits.pdf b/data/predictions/PRKCH/PRKCH_logo_bits.pdf index 8dcde9f..249f127 100644 Binary files a/data/predictions/PRKCH/PRKCH_logo_bits.pdf and b/data/predictions/PRKCH/PRKCH_logo_bits.pdf differ diff --git a/data/predictions/PRKCH/PRKCH_logo_bits.png b/data/predictions/PRKCH/PRKCH_logo_bits.png index 52cd627..c026022 100644 Binary files a/data/predictions/PRKCH/PRKCH_logo_bits.png and b/data/predictions/PRKCH/PRKCH_logo_bits.png differ diff --git a/data/predictions/PRKCH/PRKCH_logo_prob.pdf b/data/predictions/PRKCH/PRKCH_logo_prob.pdf index dce006c..ad23232 100644 Binary files a/data/predictions/PRKCH/PRKCH_logo_prob.pdf and b/data/predictions/PRKCH/PRKCH_logo_prob.pdf differ diff --git a/data/predictions/PRKCH/PRKCH_logo_prob.png b/data/predictions/PRKCH/PRKCH_logo_prob.png index f5e198d..de66529 100644 Binary files a/data/predictions/PRKCH/PRKCH_logo_prob.png and b/data/predictions/PRKCH/PRKCH_logo_prob.png differ diff --git a/data/predictions/PRKCH/metadata.json b/data/predictions/PRKCH/metadata.json index 390eb26..d8d0c84 100644 --- a/data/predictions/PRKCH/metadata.json +++ b/data/predictions/PRKCH/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":42,"npartners":50,"central_res":"ST","nsites":133,"type":"Serine/threonine kinase","name":"PRKCH","ensp":"ENSP00000329127"} +{"rm_p":"Yes","npartners_with_sites":42,"npartners":50,"central_res":"ST","nsites":133,"type":"Serine/threonine kinase","desc":"Protein kinase C eta type","family":"AGC_PKC","name":"PRKCH","ensp":"ENSP00000329127"} diff --git a/data/predictions/PRKCI/PRKCI_logo_bits.pdf b/data/predictions/PRKCI/PRKCI_logo_bits.pdf index 52273f8..4eadbd6 100644 Binary files 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+++ b/data/predictions/PRKCI/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":95,"npartners":110,"central_res":"ST","nsites":244,"type":"Serine/threonine kinase","name":"PRKCI","ensp":"ENSP00000295797"} +{"rm_p":"Yes","npartners_with_sites":95,"npartners":110,"central_res":"ST","nsites":244,"type":"Serine/threonine kinase","desc":"Protein kinase C iota type","family":"AGC_PKC","name":"PRKCI","ensp":"ENSP00000295797"} diff --git a/data/predictions/PRKCQ/PRKCQ_logo_bits.pdf b/data/predictions/PRKCQ/PRKCQ_logo_bits.pdf index 7410ce4..a55b669 100644 Binary files a/data/predictions/PRKCQ/PRKCQ_logo_bits.pdf and b/data/predictions/PRKCQ/PRKCQ_logo_bits.pdf differ diff --git a/data/predictions/PRKCQ/PRKCQ_logo_bits.png b/data/predictions/PRKCQ/PRKCQ_logo_bits.png index 7927489..54862d2 100644 Binary files a/data/predictions/PRKCQ/PRKCQ_logo_bits.png and b/data/predictions/PRKCQ/PRKCQ_logo_bits.png differ diff --git a/data/predictions/PRKCQ/PRKCQ_logo_prob.pdf 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type","family":"AGC_PKC","name":"PRKCQ","ensp":"ENSP00000263125"} diff --git a/data/predictions/PRKCZ/PRKCZ_logo_bits.pdf b/data/predictions/PRKCZ/PRKCZ_logo_bits.pdf index ec422a5..00e6993 100644 Binary files a/data/predictions/PRKCZ/PRKCZ_logo_bits.pdf and b/data/predictions/PRKCZ/PRKCZ_logo_bits.pdf differ diff --git a/data/predictions/PRKCZ/PRKCZ_logo_bits.png b/data/predictions/PRKCZ/PRKCZ_logo_bits.png index 9514138..29dbb54 100644 Binary files a/data/predictions/PRKCZ/PRKCZ_logo_bits.png and b/data/predictions/PRKCZ/PRKCZ_logo_bits.png differ diff --git a/data/predictions/PRKCZ/PRKCZ_logo_prob.pdf b/data/predictions/PRKCZ/PRKCZ_logo_prob.pdf index c890261..0b1044b 100644 Binary files a/data/predictions/PRKCZ/PRKCZ_logo_prob.pdf and b/data/predictions/PRKCZ/PRKCZ_logo_prob.pdf differ diff --git a/data/predictions/PRKCZ/PRKCZ_logo_prob.png b/data/predictions/PRKCZ/PRKCZ_logo_prob.png index 98d8fe5..f3e9ae6 100644 Binary files a/data/predictions/PRKCZ/PRKCZ_logo_prob.png and 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kinase","name":"PRKD1","ensp":"ENSP00000333568"} +{"rm_p":"Yes","npartners_with_sites":62,"npartners":73,"central_res":"ST","nsites":196,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase D1","family":"CAMK_PKD","name":"PRKD1","ensp":"ENSP00000333568"} diff --git a/data/predictions/PRKD3/PRKD3_logo_bits.pdf b/data/predictions/PRKD3/PRKD3_logo_bits.pdf index fbef710..70266ce 100644 Binary files a/data/predictions/PRKD3/PRKD3_logo_bits.pdf and b/data/predictions/PRKD3/PRKD3_logo_bits.pdf differ diff --git a/data/predictions/PRKD3/PRKD3_logo_bits.png b/data/predictions/PRKD3/PRKD3_logo_bits.png index 7a9cd2e..8f3c0ac 100644 Binary files a/data/predictions/PRKD3/PRKD3_logo_bits.png and b/data/predictions/PRKD3/PRKD3_logo_bits.png differ diff --git a/data/predictions/PRKD3/PRKD3_logo_prob.pdf b/data/predictions/PRKD3/PRKD3_logo_prob.pdf index 8594a9e..9fa3962 100644 Binary files a/data/predictions/PRKD3/PRKD3_logo_prob.pdf and 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kinase","desc":"cGMP-dependent protein kinase 1","family":"AGC_PKG","name":"PRKG1","ensp":"ENSP00000363092"} diff --git a/data/predictions/PRKG2/PRKG2_logo_bits.pdf b/data/predictions/PRKG2/PRKG2_logo_bits.pdf index a732c02..a41f12a 100644 Binary files a/data/predictions/PRKG2/PRKG2_logo_bits.pdf and b/data/predictions/PRKG2/PRKG2_logo_bits.pdf differ diff --git a/data/predictions/PRKG2/PRKG2_logo_bits.png b/data/predictions/PRKG2/PRKG2_logo_bits.png index 37fd895..34afe5b 100644 Binary files a/data/predictions/PRKG2/PRKG2_logo_bits.png and b/data/predictions/PRKG2/PRKG2_logo_bits.png differ diff --git a/data/predictions/PRKG2/PRKG2_logo_prob.pdf b/data/predictions/PRKG2/PRKG2_logo_prob.pdf index 223a3f2..6596914 100644 Binary files a/data/predictions/PRKG2/PRKG2_logo_prob.pdf and b/data/predictions/PRKG2/PRKG2_logo_prob.pdf differ diff --git a/data/predictions/PRKG2/PRKG2_logo_prob.png b/data/predictions/PRKG2/PRKG2_logo_prob.png index 62e4cc3..86a5dc9 100644 Binary files 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kinase","name":"PRKX","ensp":"ENSP00000262848"} +{"rm_p":"Yes","npartners_with_sites":84,"npartners":106,"central_res":"ST","nsites":99,"type":"Serine/threonine kinase","desc":"cAMP-dependent protein kinase catalytic subunit PRKX","family":"AGC_PKA","name":"PRKX","ensp":"ENSP00000262848"} diff --git a/data/predictions/PRPF4B/PRPF4B_logo_bits.pdf b/data/predictions/PRPF4B/PRPF4B_logo_bits.pdf index 5216115..8e20c80 100644 Binary files a/data/predictions/PRPF4B/PRPF4B_logo_bits.pdf and b/data/predictions/PRPF4B/PRPF4B_logo_bits.pdf differ diff --git a/data/predictions/PRPF4B/PRPF4B_logo_bits.png b/data/predictions/PRPF4B/PRPF4B_logo_bits.png index 03c409c..f8a7e8d 100644 Binary files a/data/predictions/PRPF4B/PRPF4B_logo_bits.png and b/data/predictions/PRPF4B/PRPF4B_logo_bits.png differ diff --git a/data/predictions/PRPF4B/PRPF4B_logo_prob.pdf b/data/predictions/PRPF4B/PRPF4B_logo_prob.pdf index 5fb354b..d2eb662 100644 Binary files a/data/predictions/PRPF4B/PRPF4B_logo_prob.pdf and 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2-beta","family":"TK_FAK","name":"PTK2B","ensp":"ENSP00000332816"} diff --git a/data/predictions/PTK6/PTK6_logo_bits.pdf b/data/predictions/PTK6/PTK6_logo_bits.pdf index aef3076..174e35d 100644 Binary files a/data/predictions/PTK6/PTK6_logo_bits.pdf and b/data/predictions/PTK6/PTK6_logo_bits.pdf differ diff --git a/data/predictions/PTK6/PTK6_logo_bits.png b/data/predictions/PTK6/PTK6_logo_bits.png index 7815c8b..c67469e 100644 Binary files a/data/predictions/PTK6/PTK6_logo_bits.png and b/data/predictions/PTK6/PTK6_logo_bits.png differ diff --git a/data/predictions/PTK6/PTK6_logo_prob.pdf b/data/predictions/PTK6/PTK6_logo_prob.pdf index de43dd0..eea1a7a 100644 Binary files a/data/predictions/PTK6/PTK6_logo_prob.pdf and b/data/predictions/PTK6/PTK6_logo_prob.pdf differ diff --git a/data/predictions/PTK6/PTK6_logo_prob.png b/data/predictions/PTK6/PTK6_logo_prob.png index c70ace0..1224d67 100644 Binary files a/data/predictions/PTK6/PTK6_logo_prob.png and 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+{"rm_p":"Yes","npartners_with_sites":168,"npartners":196,"central_res":"ST","nsites":337,"type":"Serine/threonine kinase","desc":"RAF proto-oncogene serine/threonine-protein kinase","family":"TKL_RAF","name":"RAF1","ensp":"ENSP00000251849"} diff --git a/data/predictions/RET/RET_logo_bits.pdf b/data/predictions/RET/RET_logo_bits.pdf index def4d73..f8ef536 100644 Binary files a/data/predictions/RET/RET_logo_bits.pdf and b/data/predictions/RET/RET_logo_bits.pdf differ diff --git a/data/predictions/RET/RET_logo_bits.png b/data/predictions/RET/RET_logo_bits.png index f650893..5f663d9 100644 Binary files a/data/predictions/RET/RET_logo_bits.png and b/data/predictions/RET/RET_logo_bits.png differ diff --git a/data/predictions/RET/RET_logo_prob.pdf b/data/predictions/RET/RET_logo_prob.pdf index eb124ad..a6c1f84 100644 Binary files a/data/predictions/RET/RET_logo_prob.pdf and b/data/predictions/RET/RET_logo_prob.pdf differ diff --git a/data/predictions/RET/RET_logo_prob.png 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@@ -{"rm_p":"Yes","npartners_with_sites":60,"npartners":70,"central_res":"ST","nsites":176,"type":"Serine/threonine kinase","name":"RIOK1","ensp":"ENSP00000369162"} +{"rm_p":"Yes","npartners_with_sites":60,"npartners":70,"central_res":"ST","nsites":176,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase RIO1","family":"Atypical_RIO","name":"RIOK1","ensp":"ENSP00000369162"} diff --git a/data/predictions/RIOK2/RIOK2_logo_bits.pdf b/data/predictions/RIOK2/RIOK2_logo_bits.pdf index 27dc6f8..664b943 100644 Binary files a/data/predictions/RIOK2/RIOK2_logo_bits.pdf and b/data/predictions/RIOK2/RIOK2_logo_bits.pdf differ diff --git a/data/predictions/RIOK2/RIOK2_logo_bits.png b/data/predictions/RIOK2/RIOK2_logo_bits.png index b9804c5..08f0dce 100644 Binary files a/data/predictions/RIOK2/RIOK2_logo_bits.png and b/data/predictions/RIOK2/RIOK2_logo_bits.png differ diff --git a/data/predictions/RIOK2/RIOK2_logo_prob.pdf b/data/predictions/RIOK2/RIOK2_logo_prob.pdf index 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+{"rm_p":"Yes","npartners_with_sites":108,"npartners":129,"central_res":"ST","nsites":102,"type":"Serine/threonine kinase","desc":"Receptor-interacting serine/threonine-protein kinase 1","family":"TKL_RIPK","name":"RIPK1","ensp":"ENSP00000259808"} diff --git a/data/predictions/RIPK2/RIPK2_logo_bits.pdf b/data/predictions/RIPK2/RIPK2_logo_bits.pdf index 96f9671..cee30c6 100644 Binary files a/data/predictions/RIPK2/RIPK2_logo_bits.pdf and b/data/predictions/RIPK2/RIPK2_logo_bits.pdf differ diff --git a/data/predictions/RIPK2/RIPK2_logo_bits.png b/data/predictions/RIPK2/RIPK2_logo_bits.png index 6a582f9..9c54c93 100644 Binary files a/data/predictions/RIPK2/RIPK2_logo_bits.png and b/data/predictions/RIPK2/RIPK2_logo_bits.png differ diff --git a/data/predictions/RIPK2/RIPK2_logo_prob.pdf b/data/predictions/RIPK2/RIPK2_logo_prob.pdf index 537868f..cef610a 100644 Binary files a/data/predictions/RIPK2/RIPK2_logo_prob.pdf and b/data/predictions/RIPK2/RIPK2_logo_prob.pdf differ diff --git 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+++ b/data/predictions/RIPK4/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":56,"npartners":69,"central_res":"ST","nsites":132,"type":"Serine/threonine kinase","name":"RIPK4","ensp":"ENSP00000332454"} +{"rm_p":"Yes","npartners_with_sites":56,"npartners":69,"central_res":"ST","nsites":132,"type":"Serine/threonine kinase","desc":"Receptor-interacting serine/threonine-protein kinase 4","family":"TKL_RIPK","name":"RIPK4","ensp":"ENSP00000332454"} diff --git a/data/predictions/ROCK1/ROCK1_logo_bits.pdf b/data/predictions/ROCK1/ROCK1_logo_bits.pdf index 866c59b..8159ae1 100644 Binary files a/data/predictions/ROCK1/ROCK1_logo_bits.pdf and b/data/predictions/ROCK1/ROCK1_logo_bits.pdf differ diff --git a/data/predictions/ROCK1/ROCK1_logo_bits.png b/data/predictions/ROCK1/ROCK1_logo_bits.png index 77df27f..2673ba7 100644 Binary files a/data/predictions/ROCK1/ROCK1_logo_bits.png and b/data/predictions/ROCK1/ROCK1_logo_bits.png differ diff --git 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kinase","desc":"Rho-associated protein kinase 1","family":"AGC_DMPK","name":"ROCK1","ensp":"ENSP00000382697"} diff --git a/data/predictions/ROCK2/ROCK2_logo_bits.pdf b/data/predictions/ROCK2/ROCK2_logo_bits.pdf index 83f49f9..326ce61 100644 Binary files a/data/predictions/ROCK2/ROCK2_logo_bits.pdf and b/data/predictions/ROCK2/ROCK2_logo_bits.pdf differ diff --git a/data/predictions/ROCK2/ROCK2_logo_bits.png b/data/predictions/ROCK2/ROCK2_logo_bits.png index ae35d57..32e129b 100644 Binary files a/data/predictions/ROCK2/ROCK2_logo_bits.png and b/data/predictions/ROCK2/ROCK2_logo_bits.png differ diff --git a/data/predictions/ROCK2/ROCK2_logo_prob.pdf b/data/predictions/ROCK2/ROCK2_logo_prob.pdf index 4de220c..5e996d0 100644 Binary files a/data/predictions/ROCK2/ROCK2_logo_prob.pdf and b/data/predictions/ROCK2/ROCK2_logo_prob.pdf differ diff --git a/data/predictions/ROCK2/ROCK2_logo_prob.png b/data/predictions/ROCK2/ROCK2_logo_prob.png index 4d636cf..eedcfe2 100644 Binary files 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-{"rm_p":"Yes","npartners_with_sites":71,"npartners":80,"central_res":"ST","nsites":308,"type":"Serine/threonine kinase","name":"RPS6KA1","ensp":"ENSP00000363277"} +{"rm_p":"Yes","npartners_with_sites":71,"npartners":80,"central_res":"ST","nsites":308,"type":"Serine/threonine kinase","desc":"Ribosomal protein S6 kinase alpha-1","family":"AGC_RSK","name":"RPS6KA1","ensp":"ENSP00000363277"} diff --git a/data/predictions/RPS6KA2/RPS6KA2_logo_bits.pdf b/data/predictions/RPS6KA2/RPS6KA2_logo_bits.pdf index 747e7fc..c1e21f6 100644 Binary files a/data/predictions/RPS6KA2/RPS6KA2_logo_bits.pdf and b/data/predictions/RPS6KA2/RPS6KA2_logo_bits.pdf differ diff --git a/data/predictions/RPS6KA2/RPS6KA2_logo_bits.png b/data/predictions/RPS6KA2/RPS6KA2_logo_bits.png index cc2f322..24df0f9 100644 Binary files a/data/predictions/RPS6KA2/RPS6KA2_logo_bits.png and b/data/predictions/RPS6KA2/RPS6KA2_logo_bits.png differ diff --git a/data/predictions/RPS6KA2/RPS6KA2_logo_prob.pdf 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kinase alpha-2","family":"AGC_RSK","name":"RPS6KA2","ensp":"ENSP00000386050"} diff --git a/data/predictions/RPS6KA3/RPS6KA3_logo_bits.pdf b/data/predictions/RPS6KA3/RPS6KA3_logo_bits.pdf index eff2048..93d8d55 100644 Binary files a/data/predictions/RPS6KA3/RPS6KA3_logo_bits.pdf and b/data/predictions/RPS6KA3/RPS6KA3_logo_bits.pdf differ diff --git a/data/predictions/RPS6KA3/RPS6KA3_logo_bits.png b/data/predictions/RPS6KA3/RPS6KA3_logo_bits.png index c03c52c..5d9f305 100644 Binary files a/data/predictions/RPS6KA3/RPS6KA3_logo_bits.png and b/data/predictions/RPS6KA3/RPS6KA3_logo_bits.png differ diff --git a/data/predictions/RPS6KA3/RPS6KA3_logo_prob.pdf b/data/predictions/RPS6KA3/RPS6KA3_logo_prob.pdf index 341c480..1c7b7e0 100644 Binary files a/data/predictions/RPS6KA3/RPS6KA3_logo_prob.pdf and b/data/predictions/RPS6KA3/RPS6KA3_logo_prob.pdf differ diff --git a/data/predictions/RPS6KA3/RPS6KA3_logo_prob.png b/data/predictions/RPS6KA3/RPS6KA3_logo_prob.png index a5f7fef..c3b42ba 100644 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b/data/predictions/RPS6KA5/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":68,"npartners":79,"central_res":"ST","nsites":65,"type":"Serine/threonine kinase","name":"RPS6KA5","ensp":"ENSP00000261991"} +{"rm_p":"Yes","npartners_with_sites":68,"npartners":79,"central_res":"ST","nsites":65,"type":"Serine/threonine kinase","desc":"Ribosomal protein S6 kinase alpha-5","family":"AGC_RSK","name":"RPS6KA5","ensp":"ENSP00000261991"} diff --git a/data/predictions/RPS6KB1/RPS6KB1_logo_bits.pdf b/data/predictions/RPS6KB1/RPS6KB1_logo_bits.pdf index 4530d69..a8def0b 100644 Binary files a/data/predictions/RPS6KB1/RPS6KB1_logo_bits.pdf and b/data/predictions/RPS6KB1/RPS6KB1_logo_bits.pdf differ diff --git a/data/predictions/RPS6KB1/RPS6KB1_logo_bits.png b/data/predictions/RPS6KB1/RPS6KB1_logo_bits.png index c9604f9..80209f1 100644 Binary files a/data/predictions/RPS6KB1/RPS6KB1_logo_bits.png and b/data/predictions/RPS6KB1/RPS6KB1_logo_bits.png differ diff --git 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+{"rm_p":"Yes","npartners_with_sites":138,"npartners":161,"central_res":"ST","nsites":395,"type":"Serine/threonine kinase","desc":"Ribosomal protein S6 kinase beta-1","family":"AGC_RSK","name":"RPS6KB1","ensp":"ENSP00000225577"} diff --git a/data/predictions/RPS6KB2/RPS6KB2_logo_bits.pdf b/data/predictions/RPS6KB2/RPS6KB2_logo_bits.pdf index 5f85490..62d2e27 100644 Binary files a/data/predictions/RPS6KB2/RPS6KB2_logo_bits.pdf and b/data/predictions/RPS6KB2/RPS6KB2_logo_bits.pdf differ diff --git a/data/predictions/RPS6KB2/RPS6KB2_logo_bits.png b/data/predictions/RPS6KB2/RPS6KB2_logo_bits.png index b2c1eab..6677cfd 100644 Binary files a/data/predictions/RPS6KB2/RPS6KB2_logo_bits.png and b/data/predictions/RPS6KB2/RPS6KB2_logo_bits.png differ diff --git a/data/predictions/RPS6KB2/RPS6KB2_logo_prob.pdf b/data/predictions/RPS6KB2/RPS6KB2_logo_prob.pdf index d18f889..3a32779 100644 Binary files a/data/predictions/RPS6KB2/RPS6KB2_logo_prob.pdf and 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Sgk1","family":"AGC_SGK","name":"SGK1","ensp":"ENSP00000356832"} diff --git a/data/predictions/SIK1/SIK1_logo_bits.pdf b/data/predictions/SIK1/SIK1_logo_bits.pdf index 57ee5d7..42e8a7d 100644 Binary files a/data/predictions/SIK1/SIK1_logo_bits.pdf and b/data/predictions/SIK1/SIK1_logo_bits.pdf differ diff --git a/data/predictions/SIK1/SIK1_logo_bits.png b/data/predictions/SIK1/SIK1_logo_bits.png index eacf4e4..423aee6 100644 Binary files a/data/predictions/SIK1/SIK1_logo_bits.png and b/data/predictions/SIK1/SIK1_logo_bits.png differ diff --git a/data/predictions/SIK1/SIK1_logo_prob.pdf b/data/predictions/SIK1/SIK1_logo_prob.pdf index 912de2e..7a5d541 100644 Binary files a/data/predictions/SIK1/SIK1_logo_prob.pdf and b/data/predictions/SIK1/SIK1_logo_prob.pdf differ diff --git a/data/predictions/SIK1/SIK1_logo_prob.png b/data/predictions/SIK1/SIK1_logo_prob.png index 03e5126..cd707bd 100644 Binary files a/data/predictions/SIK1/SIK1_logo_prob.png and 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+{"rm_p":"Yes","npartners_with_sites":22,"npartners":26,"central_res":"ST","nsites":49,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase SIK2","family":"CAMK_CAMKL","name":"SIK2","ensp":"ENSP00000305976"} diff --git a/data/predictions/SIK3/SIK3_logo_bits.pdf b/data/predictions/SIK3/SIK3_logo_bits.pdf index 3391a75..d179e30 100644 Binary files a/data/predictions/SIK3/SIK3_logo_bits.pdf and b/data/predictions/SIK3/SIK3_logo_bits.pdf differ diff --git a/data/predictions/SIK3/SIK3_logo_bits.png b/data/predictions/SIK3/SIK3_logo_bits.png index 7ef76d5..d373c9e 100644 Binary files a/data/predictions/SIK3/SIK3_logo_bits.png and b/data/predictions/SIK3/SIK3_logo_bits.png differ diff --git a/data/predictions/SIK3/SIK3_logo_prob.pdf b/data/predictions/SIK3/SIK3_logo_prob.pdf index a1e11bc..e1cf1da 100644 Binary files a/data/predictions/SIK3/SIK3_logo_prob.pdf and b/data/predictions/SIK3/SIK3_logo_prob.pdf differ diff --git a/data/predictions/SIK3/SIK3_logo_prob.png 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-{"rm_p":"Yes","npartners_with_sites":52,"npartners":60,"central_res":"ST","nsites":85,"type":"Serine/threonine kinase","name":"SLK","ensp":"ENSP00000358770"} +{"rm_p":"Yes","npartners_with_sites":52,"npartners":60,"central_res":"ST","nsites":85,"type":"Serine/threonine kinase","desc":"STE20-like serine/threonine-protein kinase","family":"STE_STE20","name":"SLK","ensp":"ENSP00000358770"} diff --git a/data/predictions/SMG1/SMG1_logo_bits.pdf b/data/predictions/SMG1/SMG1_logo_bits.pdf index 9f88787..1df0f54 100644 Binary files a/data/predictions/SMG1/SMG1_logo_bits.pdf and b/data/predictions/SMG1/SMG1_logo_bits.pdf differ diff --git a/data/predictions/SMG1/SMG1_logo_bits.png b/data/predictions/SMG1/SMG1_logo_bits.png index a2e9f2b..9fe1639 100644 Binary files a/data/predictions/SMG1/SMG1_logo_bits.png and b/data/predictions/SMG1/SMG1_logo_bits.png differ diff --git a/data/predictions/SMG1/SMG1_logo_prob.pdf b/data/predictions/SMG1/SMG1_logo_prob.pdf index 055c4ba..0a98778 100644 Binary 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a/data/predictions/SRC/metadata.json +++ b/data/predictions/SRC/metadata.json @@ -1 +1 @@ -{"rm_p":"No","npartners_with_sites":667,"npartners":790,"central_res":"Y","nsites":567,"type":"Tyrosine kinase","name":"SRC","ensp":"ENSP00000350941"} +{"rm_p":"No","npartners_with_sites":667,"npartners":790,"central_res":"Y","nsites":567,"type":"Tyrosine kinase","desc":"Proto-oncogene tyrosine-protein kinase Src","family":"TK_Src","name":"SRC","ensp":"ENSP00000350941"} diff --git a/data/predictions/SRPK1/SRPK1_logo_bits.pdf b/data/predictions/SRPK1/SRPK1_logo_bits.pdf index 0398a0b..ecc509b 100644 Binary files a/data/predictions/SRPK1/SRPK1_logo_bits.pdf and b/data/predictions/SRPK1/SRPK1_logo_bits.pdf differ diff --git a/data/predictions/SRPK1/SRPK1_logo_bits.png b/data/predictions/SRPK1/SRPK1_logo_bits.png index 2278e61..ef250fd 100644 Binary files a/data/predictions/SRPK1/SRPK1_logo_bits.png and b/data/predictions/SRPK1/SRPK1_logo_bits.png differ diff --git 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kinase 1","family":"CMGC_SRPK","name":"SRPK1","ensp":"ENSP00000391069"} diff --git a/data/predictions/SRPK2/SRPK2_logo_bits.pdf b/data/predictions/SRPK2/SRPK2_logo_bits.pdf index 6fcf348..0f5c87d 100644 Binary files a/data/predictions/SRPK2/SRPK2_logo_bits.pdf and b/data/predictions/SRPK2/SRPK2_logo_bits.pdf differ diff --git a/data/predictions/SRPK2/SRPK2_logo_bits.png b/data/predictions/SRPK2/SRPK2_logo_bits.png index cd34b52..2f09597 100644 Binary files a/data/predictions/SRPK2/SRPK2_logo_bits.png and b/data/predictions/SRPK2/SRPK2_logo_bits.png differ diff --git a/data/predictions/SRPK2/SRPK2_logo_prob.pdf b/data/predictions/SRPK2/SRPK2_logo_prob.pdf index 7b7ebc2..fcdb7e6 100644 Binary files a/data/predictions/SRPK2/SRPK2_logo_prob.pdf and b/data/predictions/SRPK2/SRPK2_logo_prob.pdf differ diff --git a/data/predictions/SRPK2/SRPK2_logo_prob.png b/data/predictions/SRPK2/SRPK2_logo_prob.png index 46c93a9..443d2ef 100644 Binary files a/data/predictions/SRPK2/SRPK2_logo_prob.png and 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kinase","name":"STK11","ensp":"ENSP00000324856"} +{"rm_p":"Yes","npartners_with_sites":103,"npartners":120,"central_res":"ST","nsites":305,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase STK11","family":"CAMK_CAMKL","name":"STK11","ensp":"ENSP00000324856"} diff --git a/data/predictions/MST4/MST4_data.tsv b/data/predictions/STK26/STK26_data.tsv similarity index 99% rename from data/predictions/MST4/MST4_data.tsv rename to data/predictions/STK26/STK26_data.tsv index 50d6f28..115f506 100644 --- a/data/predictions/MST4/MST4_data.tsv +++ b/data/predictions/STK26/STK26_data.tsv @@ -1,4 +1,4 @@ -name MST4 +name STK26 id ENSP00000377867 type Serine/threonine kinase proline+1_removed Yes diff --git a/data/predictions/STK26/STK26_logo_bits.pdf b/data/predictions/STK26/STK26_logo_bits.pdf new file mode 100644 index 0000000..0eed827 Binary files /dev/null and b/data/predictions/STK26/STK26_logo_bits.pdf differ diff --git a/data/predictions/STK26/STK26_logo_bits.png 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26","family":"STE_STE20","name":"STK26","ensp":"ENSP00000377867"} diff --git a/data/predictions/MST4/motifs.json b/data/predictions/STK26/motifs.json similarity index 100% rename from data/predictions/MST4/motifs.json rename to data/predictions/STK26/motifs.json diff --git a/data/predictions/MST4/sites.json b/data/predictions/STK26/sites.json similarity index 100% rename from data/predictions/MST4/sites.json rename to data/predictions/STK26/sites.json diff --git a/data/predictions/STK3/STK3_logo_bits.pdf b/data/predictions/STK3/STK3_logo_bits.pdf index 691a274..08c8841 100644 Binary files a/data/predictions/STK3/STK3_logo_bits.pdf and b/data/predictions/STK3/STK3_logo_bits.pdf differ diff --git a/data/predictions/STK3/STK3_logo_bits.png b/data/predictions/STK3/STK3_logo_bits.png index 83163e9..bca79b9 100644 Binary files a/data/predictions/STK3/STK3_logo_bits.png and b/data/predictions/STK3/STK3_logo_bits.png differ diff --git a/data/predictions/STK3/STK3_logo_prob.pdf 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3","family":"STE_STE20","name":"STK3","ensp":"ENSP00000390500"} diff --git a/data/predictions/STK36/STK36_logo_bits.pdf b/data/predictions/STK36/STK36_logo_bits.pdf index 5cb3d12..1409aa2 100644 Binary files a/data/predictions/STK36/STK36_logo_bits.pdf and b/data/predictions/STK36/STK36_logo_bits.pdf differ diff --git a/data/predictions/STK36/STK36_logo_bits.png b/data/predictions/STK36/STK36_logo_bits.png index 4c69841..c4e22a4 100644 Binary files a/data/predictions/STK36/STK36_logo_bits.png and b/data/predictions/STK36/STK36_logo_bits.png differ diff --git a/data/predictions/STK36/STK36_logo_prob.pdf b/data/predictions/STK36/STK36_logo_prob.pdf index 8f22ddd..9b3f842 100644 Binary files a/data/predictions/STK36/STK36_logo_prob.pdf and b/data/predictions/STK36/STK36_logo_prob.pdf differ diff --git a/data/predictions/STK36/STK36_logo_prob.png b/data/predictions/STK36/STK36_logo_prob.png index 6e2211d..a5489f9 100644 Binary files a/data/predictions/STK36/STK36_logo_prob.png and 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-{"rm_p":"Yes","npartners_with_sites":111,"npartners":147,"central_res":"ST","nsites":50,"type":"Serine/threonine kinase","name":"STK38","ensp":"ENSP00000229812"} +{"rm_p":"Yes","npartners_with_sites":111,"npartners":147,"central_res":"ST","nsites":50,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase 38","family":"AGC_NDR","name":"STK38","ensp":"ENSP00000229812"} diff --git a/data/predictions/STK38L/STK38L_logo_bits.pdf b/data/predictions/STK38L/STK38L_logo_bits.pdf index bf27b04..729f173 100644 Binary files a/data/predictions/STK38L/STK38L_logo_bits.pdf and b/data/predictions/STK38L/STK38L_logo_bits.pdf differ diff --git a/data/predictions/STK38L/STK38L_logo_bits.png b/data/predictions/STK38L/STK38L_logo_bits.png index 7aaae59..dafcc36 100644 Binary files a/data/predictions/STK38L/STK38L_logo_bits.png and b/data/predictions/STK38L/STK38L_logo_bits.png differ diff --git a/data/predictions/STK38L/STK38L_logo_prob.pdf b/data/predictions/STK38L/STK38L_logo_prob.pdf 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38-like","family":"AGC_NDR","name":"STK38L","ensp":"ENSP00000373684"} diff --git a/data/predictions/STK39/STK39_logo_bits.pdf b/data/predictions/STK39/STK39_logo_bits.pdf index 2c826a3..862eca1 100644 Binary files a/data/predictions/STK39/STK39_logo_bits.pdf and b/data/predictions/STK39/STK39_logo_bits.pdf differ diff --git a/data/predictions/STK39/STK39_logo_bits.png b/data/predictions/STK39/STK39_logo_bits.png index f1ef309..45012ad 100644 Binary files a/data/predictions/STK39/STK39_logo_bits.png and b/data/predictions/STK39/STK39_logo_bits.png differ diff --git a/data/predictions/STK39/STK39_logo_prob.pdf b/data/predictions/STK39/STK39_logo_prob.pdf index 1ce3ba1..bd17082 100644 Binary files a/data/predictions/STK39/STK39_logo_prob.pdf and b/data/predictions/STK39/STK39_logo_prob.pdf differ diff --git a/data/predictions/STK39/STK39_logo_prob.png b/data/predictions/STK39/STK39_logo_prob.png index b85f248..46e56b0 100644 Binary files a/data/predictions/STK39/STK39_logo_prob.png and 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kinase","name":"STK4","ensp":"ENSP00000361892"} +{"rm_p":"Yes","npartners_with_sites":34,"npartners":37,"central_res":"ST","nsites":76,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase 4","family":"STE_STE20","name":"STK4","ensp":"ENSP00000361892"} diff --git a/data/predictions/STRADA/STRADA_logo_bits.pdf b/data/predictions/STRADA/STRADA_logo_bits.pdf index c810adb..4818add 100644 Binary files a/data/predictions/STRADA/STRADA_logo_bits.pdf and b/data/predictions/STRADA/STRADA_logo_bits.pdf differ diff --git a/data/predictions/STRADA/STRADA_logo_bits.png b/data/predictions/STRADA/STRADA_logo_bits.png index 9aaeec6..cfb5a30 100644 Binary files a/data/predictions/STRADA/STRADA_logo_bits.png and b/data/predictions/STRADA/STRADA_logo_bits.png differ diff --git a/data/predictions/STRADA/STRADA_logo_prob.pdf b/data/predictions/STRADA/STRADA_logo_prob.pdf index 4052241..8f43ed1 100644 Binary files a/data/predictions/STRADA/STRADA_logo_prob.pdf and 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a/data/predictions/STRADB/metadata.json b/data/predictions/STRADB/metadata.json index 47b2b32..3b8b614 100644 --- a/data/predictions/STRADB/metadata.json +++ b/data/predictions/STRADB/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":24,"npartners":31,"central_res":"ST","nsites":17,"type":"Serine/threonine kinase","name":"STRADB","ensp":"ENSP00000194530"} +{"rm_p":"Yes","npartners_with_sites":24,"npartners":31,"central_res":"ST","nsites":17,"type":"Serine/threonine kinase","desc":"STE20-related kinase adapter protein beta","family":"STE_STE20","name":"STRADB","ensp":"ENSP00000194530"} diff --git a/data/predictions/SYK/SYK_logo_bits.pdf b/data/predictions/SYK/SYK_logo_bits.pdf index f56f40d..7acfa6e 100644 Binary files a/data/predictions/SYK/SYK_logo_bits.pdf and b/data/predictions/SYK/SYK_logo_bits.pdf differ diff --git a/data/predictions/SYK/SYK_logo_bits.png b/data/predictions/SYK/SYK_logo_bits.png index 9e8f210..a33a753 100644 Binary files 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+{"rm_p":"No","npartners_with_sites":218,"npartners":281,"central_res":"Y","nsites":288,"type":"Tyrosine kinase","desc":"Tyrosine-protein kinase SYK","family":"TK_Syk","name":"SYK","ensp":"ENSP00000364898"} diff --git a/data/predictions/TAOK1/TAOK1_logo_bits.pdf b/data/predictions/TAOK1/TAOK1_logo_bits.pdf index 085c5eb..3e49ddb 100644 Binary files a/data/predictions/TAOK1/TAOK1_logo_bits.pdf and b/data/predictions/TAOK1/TAOK1_logo_bits.pdf differ diff --git a/data/predictions/TAOK1/TAOK1_logo_bits.png b/data/predictions/TAOK1/TAOK1_logo_bits.png index dfb075f..960789c 100644 Binary files a/data/predictions/TAOK1/TAOK1_logo_bits.png and b/data/predictions/TAOK1/TAOK1_logo_bits.png differ diff --git a/data/predictions/TAOK1/TAOK1_logo_prob.pdf b/data/predictions/TAOK1/TAOK1_logo_prob.pdf index bf6e82b..d82dcb9 100644 Binary files a/data/predictions/TAOK1/TAOK1_logo_prob.pdf and b/data/predictions/TAOK1/TAOK1_logo_prob.pdf differ diff --git a/data/predictions/TAOK1/TAOK1_logo_prob.png 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-{"rm_p":"Yes","npartners_with_sites":93,"npartners":110,"central_res":"ST","nsites":90,"type":"Serine/threonine kinase","name":"TBK1","ensp":"ENSP00000329967"} +{"rm_p":"Yes","npartners_with_sites":93,"npartners":110,"central_res":"ST","nsites":90,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase TBK1","family":"Other_IKK","name":"TBK1","ensp":"ENSP00000329967"} diff --git a/data/predictions/TEC/TEC_logo_bits.pdf b/data/predictions/TEC/TEC_logo_bits.pdf index c1e204f..005c6bc 100644 Binary files a/data/predictions/TEC/TEC_logo_bits.pdf and b/data/predictions/TEC/TEC_logo_bits.pdf differ diff --git a/data/predictions/TEC/TEC_logo_bits.png b/data/predictions/TEC/TEC_logo_bits.png index cca2f8a..a03f0eb 100644 Binary files a/data/predictions/TEC/TEC_logo_bits.png and b/data/predictions/TEC/TEC_logo_bits.png differ diff --git a/data/predictions/TEC/TEC_logo_prob.pdf b/data/predictions/TEC/TEC_logo_prob.pdf index 3a94ce1..cdbeb02 100644 Binary files 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+{"rm_p":"Yes","npartners_with_sites":91,"npartners":114,"central_res":"ST","nsites":88,"type":"Serine/threonine kinase","desc":"TGF-beta receptor type-2","family":"TKL_STKR","name":"TGFBR2","ensp":"ENSP00000351905"} diff --git a/data/predictions/TIE1/TIE1_logo_bits.pdf b/data/predictions/TIE1/TIE1_logo_bits.pdf index 718c9f7..7796e91 100644 Binary files a/data/predictions/TIE1/TIE1_logo_bits.pdf and b/data/predictions/TIE1/TIE1_logo_bits.pdf differ diff --git a/data/predictions/TIE1/TIE1_logo_bits.png b/data/predictions/TIE1/TIE1_logo_bits.png index 634bdf5..18b71a5 100644 Binary files a/data/predictions/TIE1/TIE1_logo_bits.png and b/data/predictions/TIE1/TIE1_logo_bits.png differ diff --git a/data/predictions/TIE1/TIE1_logo_prob.pdf b/data/predictions/TIE1/TIE1_logo_prob.pdf index f7e857c..aa1fea5 100644 Binary files a/data/predictions/TIE1/TIE1_logo_prob.pdf and b/data/predictions/TIE1/TIE1_logo_prob.pdf differ diff --git a/data/predictions/TIE1/TIE1_logo_prob.png 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diff --git a/data/predictions/TLK1/TLK1_logo_bits.png b/data/predictions/TLK1/TLK1_logo_bits.png index 67486fd..6782300 100644 Binary files a/data/predictions/TLK1/TLK1_logo_bits.png and b/data/predictions/TLK1/TLK1_logo_bits.png differ diff --git a/data/predictions/TLK1/TLK1_logo_prob.pdf b/data/predictions/TLK1/TLK1_logo_prob.pdf index 337ac69..93ef0ad 100644 Binary files a/data/predictions/TLK1/TLK1_logo_prob.pdf and b/data/predictions/TLK1/TLK1_logo_prob.pdf differ diff --git a/data/predictions/TLK1/TLK1_logo_prob.png b/data/predictions/TLK1/TLK1_logo_prob.png index f922141..5949f84 100644 Binary files a/data/predictions/TLK1/TLK1_logo_prob.png and b/data/predictions/TLK1/TLK1_logo_prob.png differ diff --git a/data/predictions/TLK1/metadata.json b/data/predictions/TLK1/metadata.json index 0c26b5a..b3eae4c 100644 --- a/data/predictions/TLK1/metadata.json +++ b/data/predictions/TLK1/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":28,"npartners":33,"central_res":"ST","nsites":45,"type":"Serine/threonine kinase","name":"TLK1","ensp":"ENSP00000411099"} +{"rm_p":"Yes","npartners_with_sites":28,"npartners":33,"central_res":"ST","nsites":45,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase tousled-like 1","family":"Other_TLK","name":"TLK1","ensp":"ENSP00000411099"} diff --git a/data/predictions/TNIK/TNIK_logo_bits.pdf b/data/predictions/TNIK/TNIK_logo_bits.pdf index bc399d6..acc3be9 100644 Binary files a/data/predictions/TNIK/TNIK_logo_bits.pdf and b/data/predictions/TNIK/TNIK_logo_bits.pdf differ diff --git a/data/predictions/TNIK/TNIK_logo_bits.png b/data/predictions/TNIK/TNIK_logo_bits.png index e62377c..19c137c 100644 Binary files a/data/predictions/TNIK/TNIK_logo_bits.png and b/data/predictions/TNIK/TNIK_logo_bits.png differ diff --git a/data/predictions/TNIK/TNIK_logo_prob.pdf b/data/predictions/TNIK/TNIK_logo_prob.pdf index e0ae991..6d0c23b 100644 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b/data/predictions/TNK2/metadata.json index 35bb6be..38d29c1 100644 --- a/data/predictions/TNK2/metadata.json +++ b/data/predictions/TNK2/metadata.json @@ -1 +1 @@ -{"rm_p":"No","npartners_with_sites":59,"npartners":70,"central_res":"Y","nsites":10,"type":"Tyrosine kinase","name":"TNK2","ensp":"ENSP00000371341"} +{"rm_p":"No","npartners_with_sites":59,"npartners":70,"central_res":"Y","nsites":10,"type":"Tyrosine kinase","desc":"Activated CDC42 kinase 1","family":"TK_Ack","name":"TNK2","ensp":"ENSP00000371341"} diff --git a/data/predictions/TRIO/TRIO_logo_bits.pdf b/data/predictions/TRIO/TRIO_logo_bits.pdf index 89b8ace..52bbd9e 100644 Binary files a/data/predictions/TRIO/TRIO_logo_bits.pdf and b/data/predictions/TRIO/TRIO_logo_bits.pdf differ diff --git a/data/predictions/TRIO/TRIO_logo_bits.png b/data/predictions/TRIO/TRIO_logo_bits.png index d07cc19..f18f35a 100644 Binary files a/data/predictions/TRIO/TRIO_logo_bits.png and b/data/predictions/TRIO/TRIO_logo_bits.png differ diff --git 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protein","family":"CAMK_Trio","name":"TRIO","ensp":"ENSP00000339299"} diff --git a/data/predictions/TRRAP/TRRAP_logo_bits.pdf b/data/predictions/TRRAP/TRRAP_logo_bits.pdf index 3263151..fa3625e 100644 Binary files a/data/predictions/TRRAP/TRRAP_logo_bits.pdf and b/data/predictions/TRRAP/TRRAP_logo_bits.pdf differ diff --git a/data/predictions/TRRAP/TRRAP_logo_bits.png b/data/predictions/TRRAP/TRRAP_logo_bits.png index a91ebf4..a0032f9 100644 Binary files a/data/predictions/TRRAP/TRRAP_logo_bits.png and b/data/predictions/TRRAP/TRRAP_logo_bits.png differ diff --git a/data/predictions/TRRAP/TRRAP_logo_prob.pdf b/data/predictions/TRRAP/TRRAP_logo_prob.pdf index 82ce28e..a0a2d2a 100644 Binary files a/data/predictions/TRRAP/TRRAP_logo_prob.pdf and b/data/predictions/TRRAP/TRRAP_logo_prob.pdf differ diff --git a/data/predictions/TRRAP/TRRAP_logo_prob.png b/data/predictions/TRRAP/TRRAP_logo_prob.png index 2ef7da7..8880d35 100644 Binary files a/data/predictions/TRRAP/TRRAP_logo_prob.png and 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b/data/predictions/TTK/TTK_logo_bits.png index 2290050..12095c4 100644 Binary files a/data/predictions/TTK/TTK_logo_bits.png and b/data/predictions/TTK/TTK_logo_bits.png differ diff --git a/data/predictions/TTK/TTK_logo_prob.pdf b/data/predictions/TTK/TTK_logo_prob.pdf index 2a28739..a91a663 100644 Binary files a/data/predictions/TTK/TTK_logo_prob.pdf and b/data/predictions/TTK/TTK_logo_prob.pdf differ diff --git a/data/predictions/TTK/TTK_logo_prob.png b/data/predictions/TTK/TTK_logo_prob.png index 46345a8..6e64c25 100644 Binary files a/data/predictions/TTK/TTK_logo_prob.png and b/data/predictions/TTK/TTK_logo_prob.png differ diff --git a/data/predictions/TTK/metadata.json b/data/predictions/TTK/metadata.json index 3a44b9e..486281b 100644 --- a/data/predictions/TTK/metadata.json +++ b/data/predictions/TTK/metadata.json @@ -1 +1 @@ -{"rm_p":"Yes","npartners_with_sites":244,"npartners":286,"central_res":"ST","nsites":635,"type":"Serine/threonine kinase","name":"TTK","ensp":"ENSP00000230510"} +{"rm_p":"Yes","npartners_with_sites":244,"npartners":286,"central_res":"ST","nsites":635,"type":"Serine/threonine kinase","desc":"Dual specificity protein kinase TTK","family":"Other_TTK","name":"TTK","ensp":"ENSP00000230510"} diff --git a/data/predictions/TYK2/TYK2_logo_bits.pdf b/data/predictions/TYK2/TYK2_logo_bits.pdf index 471b6a0..fa6fa9c 100644 Binary files a/data/predictions/TYK2/TYK2_logo_bits.pdf and b/data/predictions/TYK2/TYK2_logo_bits.pdf differ diff --git a/data/predictions/TYK2/TYK2_logo_bits.png b/data/predictions/TYK2/TYK2_logo_bits.png index be81005..385392c 100644 Binary files a/data/predictions/TYK2/TYK2_logo_bits.png and b/data/predictions/TYK2/TYK2_logo_bits.png differ diff --git a/data/predictions/TYK2/TYK2_logo_prob.pdf b/data/predictions/TYK2/TYK2_logo_prob.pdf index f0b2e37..e39b7ac 100644 Binary files a/data/predictions/TYK2/TYK2_logo_prob.pdf and b/data/predictions/TYK2/TYK2_logo_prob.pdf differ diff --git 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/dev/null @@ -1,26 +0,0 @@ -name UHMK1 -id ENSP00000420270 -type Serine/threonine kinase -proline+1_removed No -npartners 5 -npartners_with_sites 5 -nsites 14 -// -motif score fg_matches fg_size bg_matches bg_size fold_increase -.....[ST]P.... 6.22 14 50 578 10000 4.84 -// -prot_id prot_name position flank kinase source string_score -ENSP00000228872 CDKN1B 10 RVSNGSPSLER AKT1;CAMK2A;CDK6;HIPK2;MAPK1;UHMK1 hprd;pelm;psite 851 -ENSP00000228872 CDKN1B 178 NVSDGSPNAGS MAPK1 pelm;psite 851 -ENSP00000228872 CDKN1B 187 GSVEQTPKKPG CDK2;CDK6;MAPK1;MAPK3 hprd;pelm;psite 851 -ENSP00000410452 STMN1 25 FELILSPRSKE CDK1;CDK2;MAPK13;MAPK3;PRKCB hprd;pelm;psite 662 -ENSP00000410452 STMN1 38 PEFPLSPPKKK CDK1;CDK2;MAPK13;MAPK3;PAK1;PRKCB;UHMK1 hprd;pelm;psite 662 -ENSP00000295987 SYN1 39 PPGAHSPGATP pelm;psite 808 -ENSP00000295987 SYN1 67 SPAAPSPGSSG CDK5 hprd;psite 808 -ENSP00000295987 SYN1 427 RQRDASPGRGS pelm;psite 808 -ENSP00000295987 SYN1 436 GSHGQTPSPGA psite 808 -ENSP00000295987 SYN1 438 HGQTPSPGALP UHMK1 pelm;psite 808 -ENSP00000295987 SYN1 551 ARPPASPSPQR CDK5 hprd;pelm;psite 808 -ENSP00000295987 SYN1 553 PPASPSPQRQA CDK5 hprd;pelm;psite 808 -ENSP00000295987 SYN1 510 PQRLPSPTSAP hprd 808 -ENSP00000295987 SYN1 62 VAPAASPAAPS CDK5 hprd 808 diff --git a/data/predictions/UHMK1/UHMK1_logo_bits.png b/data/predictions/UHMK1/UHMK1_logo_bits.png deleted file mode 100644 index 503c4f0..0000000 Binary files a/data/predictions/UHMK1/UHMK1_logo_bits.png and /dev/null differ diff --git a/data/predictions/UHMK1/UHMK1_logo_prob.png b/data/predictions/UHMK1/UHMK1_logo_prob.png deleted file mode 100644 index 81ab97f..0000000 Binary files a/data/predictions/UHMK1/UHMK1_logo_prob.png and /dev/null differ diff --git a/data/predictions/UHMK1/metadata.json b/data/predictions/UHMK1/metadata.json deleted file mode 100644 index e3e9b4d..0000000 --- a/data/predictions/UHMK1/metadata.json +++ /dev/null @@ -1 +0,0 @@ -{"rm_p":"No","npartners_with_sites":5,"npartners":5,"central_res":"ST","nsites":14,"type":"Serine/threonine kinase","name":"UHMK1","ensp":"ENSP00000420270"} diff --git a/data/predictions/UHMK1/motifs.json b/data/predictions/UHMK1/motifs.json deleted file mode 100644 index 170ef65..0000000 --- a/data/predictions/UHMK1/motifs.json +++ /dev/null @@ -1 +0,0 @@ -[{"motif":".....[ST]P....","score":6.22,"fg_matches":14,"fg_size":50,"bg_matches":578,"bg_size":10000,"fold_increase":4.84}] diff --git a/data/predictions/UHMK1/sites.json b/data/predictions/UHMK1/sites.json deleted file mode 100644 index 85042b9..0000000 --- a/data/predictions/UHMK1/sites.json +++ /dev/null @@ -1 +0,0 @@ -[{"prot_id":"ENSP00000228872","prot_name":"CDKN1B","position":10,"flank":"RVSNGSPSLER","kinase":"AKT1;CAMK2A;CDK6;HIPK2;MAPK1;UHMK1","source":"hprd;pelm;psite","string_score":851},{"prot_id":"ENSP00000228872","prot_name":"CDKN1B","position":178,"flank":"NVSDGSPNAGS","kinase":"MAPK1","source":"pelm;psite","string_score":851},{"prot_id":"ENSP00000228872","prot_name":"CDKN1B","position":187,"flank":"GSVEQTPKKPG","kinase":"CDK2;CDK6;MAPK1;MAPK3","source":"hprd;pelm;psite","string_score":851},{"prot_id":"ENSP00000410452","prot_name":"STMN1","position":25,"flank":"FELILSPRSKE","kinase":"CDK1;CDK2;MAPK13;MAPK3;PRKCB","source":"hprd;pelm;psite","string_score":662},{"prot_id":"ENSP00000410452","prot_name":"STMN1","position":38,"flank":"PEFPLSPPKKK","kinase":"CDK1;CDK2;MAPK13;MAPK3;PAK1;PRKCB;UHMK1","source":"hprd;pelm;psite","string_score":662},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":39,"flank":"PPGAHSPGATP","kinase":"","source":"pelm;psite","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":67,"flank":"SPAAPSPGSSG","kinase":"CDK5","source":"hprd;psite","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":427,"flank":"RQRDASPGRGS","kinase":"","source":"pelm;psite","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":436,"flank":"GSHGQTPSPGA","kinase":"","source":"psite","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":438,"flank":"HGQTPSPGALP","kinase":"UHMK1","source":"pelm;psite","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":551,"flank":"ARPPASPSPQR","kinase":"CDK5","source":"hprd;pelm;psite","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":553,"flank":"PPASPSPQRQA","kinase":"CDK5","source":"hprd;pelm;psite","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":510,"flank":"PQRLPSPTSAP","kinase":"","source":"hprd","string_score":808},{"prot_id":"ENSP00000295987","prot_name":"SYN1","position":62,"flank":"VAPAASPAAPS","kinase":"CDK5","source":"hprd","string_score":808}] diff --git a/data/predictions/ULK1/ULK1_logo_bits.pdf b/data/predictions/ULK1/ULK1_logo_bits.pdf index b32512e..c880e9e 100644 Binary files a/data/predictions/ULK1/ULK1_logo_bits.pdf and b/data/predictions/ULK1/ULK1_logo_bits.pdf differ diff --git a/data/predictions/ULK1/ULK1_logo_bits.png b/data/predictions/ULK1/ULK1_logo_bits.png index a40f7fc..77d909a 100644 Binary files a/data/predictions/ULK1/ULK1_logo_bits.png and b/data/predictions/ULK1/ULK1_logo_bits.png differ diff --git a/data/predictions/ULK1/ULK1_logo_prob.pdf b/data/predictions/ULK1/ULK1_logo_prob.pdf index fa219c4..78d7c98 100644 Binary files a/data/predictions/ULK1/ULK1_logo_prob.pdf and b/data/predictions/ULK1/ULK1_logo_prob.pdf differ diff --git a/data/predictions/ULK1/ULK1_logo_prob.png b/data/predictions/ULK1/ULK1_logo_prob.png index 0beb1b7..c7dbd07 100644 Binary files a/data/predictions/ULK1/ULK1_logo_prob.png and b/data/predictions/ULK1/ULK1_logo_prob.png differ diff --git a/data/predictions/ULK1/metadata.json 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-{"rm_p":"Yes","npartners_with_sites":139,"npartners":159,"central_res":"ST","nsites":616,"type":"Serine/threonine kinase","name":"VRK1","ensp":"ENSP00000216639"} +{"rm_p":"Yes","npartners_with_sites":139,"npartners":159,"central_res":"ST","nsites":616,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase VRK1","family":"CK1_VRK","name":"VRK1","ensp":"ENSP00000216639"} diff --git a/data/predictions/WEE1/WEE1_logo_bits.pdf b/data/predictions/WEE1/WEE1_logo_bits.pdf index 0df4732..8787ccc 100644 Binary files a/data/predictions/WEE1/WEE1_logo_bits.pdf and b/data/predictions/WEE1/WEE1_logo_bits.pdf differ diff --git a/data/predictions/WEE1/WEE1_logo_bits.png b/data/predictions/WEE1/WEE1_logo_bits.png index 6a3ece9..9b0e7a7 100644 Binary files a/data/predictions/WEE1/WEE1_logo_bits.png and b/data/predictions/WEE1/WEE1_logo_bits.png differ diff --git a/data/predictions/WEE1/WEE1_logo_prob.pdf b/data/predictions/WEE1/WEE1_logo_prob.pdf index 416751c..ca6e156 100644 Binary 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WNK1","family":"Other_WNK","name":"WNK1","ensp":"ENSP00000313059"} diff --git a/data/predictions/WNK2/WNK2_logo_bits.pdf b/data/predictions/WNK2/WNK2_logo_bits.pdf index f95c9e5..703fd50 100644 Binary files a/data/predictions/WNK2/WNK2_logo_bits.pdf and b/data/predictions/WNK2/WNK2_logo_bits.pdf differ diff --git a/data/predictions/WNK2/WNK2_logo_bits.png b/data/predictions/WNK2/WNK2_logo_bits.png index 02f62fe..a8d0c2c 100644 Binary files a/data/predictions/WNK2/WNK2_logo_bits.png and b/data/predictions/WNK2/WNK2_logo_bits.png differ diff --git a/data/predictions/WNK2/WNK2_logo_prob.pdf b/data/predictions/WNK2/WNK2_logo_prob.pdf index d1f3531..580c7ce 100644 Binary files a/data/predictions/WNK2/WNK2_logo_prob.pdf and b/data/predictions/WNK2/WNK2_logo_prob.pdf differ diff --git a/data/predictions/WNK2/WNK2_logo_prob.png b/data/predictions/WNK2/WNK2_logo_prob.png index ecabc42..982d395 100644 Binary files a/data/predictions/WNK2/WNK2_logo_prob.png and 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+{"rm_p":"Yes","npartners_with_sites":98,"npartners":116,"central_res":"ST","nsites":383,"type":"Serine/threonine kinase","desc":"Serine/threonine-protein kinase WNK3","family":"Other_WNK","name":"WNK3","ensp":"ENSP00000346667"} diff --git a/data/predictions/YES1/YES1_logo_bits.pdf b/data/predictions/YES1/YES1_logo_bits.pdf index 12e3821..560dd4c 100644 Binary files a/data/predictions/YES1/YES1_logo_bits.pdf and b/data/predictions/YES1/YES1_logo_bits.pdf differ diff --git a/data/predictions/YES1/YES1_logo_bits.png b/data/predictions/YES1/YES1_logo_bits.png index 84186b4..b82c051 100644 Binary files a/data/predictions/YES1/YES1_logo_bits.png and b/data/predictions/YES1/YES1_logo_bits.png differ diff --git a/data/predictions/YES1/YES1_logo_prob.pdf b/data/predictions/YES1/YES1_logo_prob.pdf index ec09bb5..d72994b 100644 Binary files a/data/predictions/YES1/YES1_logo_prob.pdf and b/data/predictions/YES1/YES1_logo_prob.pdf differ diff --git a/data/predictions/YES1/YES1_logo_prob.png 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b/data/predictions/YWHAH/YWHAH_logo_bits.png differ diff --git a/data/predictions/YWHAH/YWHAH_logo_prob.pdf b/data/predictions/YWHAH/YWHAH_logo_prob.pdf index 9a7fec7..143caa7 100644 Binary files a/data/predictions/YWHAH/YWHAH_logo_prob.pdf and b/data/predictions/YWHAH/YWHAH_logo_prob.pdf differ diff --git a/data/predictions/YWHAH/YWHAH_logo_prob.png b/data/predictions/YWHAH/YWHAH_logo_prob.png index 8354933..99c3ab2 100644 Binary files a/data/predictions/YWHAH/YWHAH_logo_prob.png and b/data/predictions/YWHAH/YWHAH_logo_prob.png differ diff --git a/data/predictions/YWHAH/metadata.json b/data/predictions/YWHAH/metadata.json index 9e74d0f..fc21577 100644 --- a/data/predictions/YWHAH/metadata.json +++ b/data/predictions/YWHAH/metadata.json @@ -1 +1 @@ -{"rm_p":[],"npartners_with_sites":144,"npartners":170,"central_res":null,"nsites":162,"type":"14-3-3 protein","name":"YWHAH","ensp":"ENSP00000248975"} +{"rm_p":[],"npartners_with_sites":144,"npartners":170,"central_res":null,"nsites":162,"type":"14-3-3 protein","desc":"14-3-3 protein eta","family":"14-3-3","name":"YWHAH","ensp":"ENSP00000248975"} diff --git a/data/predictions/YWHAQ/YWHAQ_logo_bits.pdf b/data/predictions/YWHAQ/YWHAQ_logo_bits.pdf index 4e4836a..28be5f9 100644 Binary files a/data/predictions/YWHAQ/YWHAQ_logo_bits.pdf and b/data/predictions/YWHAQ/YWHAQ_logo_bits.pdf differ diff --git a/data/predictions/YWHAQ/YWHAQ_logo_bits.png b/data/predictions/YWHAQ/YWHAQ_logo_bits.png index 0591f25..51be642 100644 Binary files a/data/predictions/YWHAQ/YWHAQ_logo_bits.png and b/data/predictions/YWHAQ/YWHAQ_logo_bits.png differ diff --git a/data/predictions/YWHAQ/YWHAQ_logo_prob.pdf b/data/predictions/YWHAQ/YWHAQ_logo_prob.pdf index 22a42f0..3af3c55 100644 Binary files a/data/predictions/YWHAQ/YWHAQ_logo_prob.pdf and b/data/predictions/YWHAQ/YWHAQ_logo_prob.pdf differ diff --git a/data/predictions/YWHAQ/YWHAQ_logo_prob.png b/data/predictions/YWHAQ/YWHAQ_logo_prob.png index b7fee27..491a6a9 100644 Binary files a/data/predictions/YWHAQ/YWHAQ_logo_prob.png and b/data/predictions/YWHAQ/YWHAQ_logo_prob.png differ diff --git a/data/predictions/YWHAQ/metadata.json b/data/predictions/YWHAQ/metadata.json index e67d2eb..f57d9fd 100644 --- a/data/predictions/YWHAQ/metadata.json +++ b/data/predictions/YWHAQ/metadata.json @@ -1 +1 @@ -{"rm_p":[],"npartners_with_sites":246,"npartners":277,"central_res":null,"nsites":144,"type":"14-3-3 protein","name":"YWHAQ","ensp":"ENSP00000238081"} +{"rm_p":[],"npartners_with_sites":246,"npartners":277,"central_res":null,"nsites":144,"type":"14-3-3 protein","desc":"14-3-3 protein theta","family":"14-3-3","name":"YWHAQ","ensp":"ENSP00000238081"} diff --git a/data/predictions/YWHAZ/YWHAZ_logo_bits.pdf b/data/predictions/YWHAZ/YWHAZ_logo_bits.pdf index 62259fe..2bbe9bd 100644 Binary files a/data/predictions/YWHAZ/YWHAZ_logo_bits.pdf and b/data/predictions/YWHAZ/YWHAZ_logo_bits.pdf differ diff --git a/data/predictions/YWHAZ/YWHAZ_logo_bits.png b/data/predictions/YWHAZ/YWHAZ_logo_bits.png index d1f890a..730b469 100644 Binary files a/data/predictions/YWHAZ/YWHAZ_logo_bits.png and b/data/predictions/YWHAZ/YWHAZ_logo_bits.png differ diff --git a/data/predictions/YWHAZ/YWHAZ_logo_prob.pdf b/data/predictions/YWHAZ/YWHAZ_logo_prob.pdf index a8f3e35..da155f5 100644 Binary files a/data/predictions/YWHAZ/YWHAZ_logo_prob.pdf and b/data/predictions/YWHAZ/YWHAZ_logo_prob.pdf differ diff --git a/data/predictions/YWHAZ/YWHAZ_logo_prob.png b/data/predictions/YWHAZ/YWHAZ_logo_prob.png index 43fab88..8fcdd71 100644 Binary files a/data/predictions/YWHAZ/YWHAZ_logo_prob.png and b/data/predictions/YWHAZ/YWHAZ_logo_prob.png differ diff --git a/data/predictions/YWHAZ/metadata.json b/data/predictions/YWHAZ/metadata.json index cf0d477..7e20a32 100644 --- a/data/predictions/YWHAZ/metadata.json +++ b/data/predictions/YWHAZ/metadata.json @@ -1 +1 @@ -{"rm_p":[],"npartners_with_sites":256,"npartners":296,"central_res":null,"nsites":73,"type":"14-3-3 protein","name":"YWHAZ","ensp":"ENSP00000309503"} +{"rm_p":[],"npartners_with_sites":256,"npartners":296,"central_res":null,"nsites":73,"type":"14-3-3 protein","desc":"14-3-3 protein zeta/delta","family":"14-3-3","name":"YWHAZ","ensp":"ENSP00000309503"} diff --git a/data/predictions/ZAP70/ZAP70_logo_bits.pdf b/data/predictions/ZAP70/ZAP70_logo_bits.pdf index 5e37a79..02b16db 100644 Binary files a/data/predictions/ZAP70/ZAP70_logo_bits.pdf and b/data/predictions/ZAP70/ZAP70_logo_bits.pdf differ diff --git a/data/predictions/ZAP70/ZAP70_logo_bits.png b/data/predictions/ZAP70/ZAP70_logo_bits.png index 7272072..90c4edd 100644 Binary files a/data/predictions/ZAP70/ZAP70_logo_bits.png and b/data/predictions/ZAP70/ZAP70_logo_bits.png differ diff --git a/data/predictions/ZAP70/ZAP70_logo_prob.pdf b/data/predictions/ZAP70/ZAP70_logo_prob.pdf index 6ef21e9..5799d46 100644 Binary files a/data/predictions/ZAP70/ZAP70_logo_prob.pdf and b/data/predictions/ZAP70/ZAP70_logo_prob.pdf differ diff --git a/data/predictions/ZAP70/ZAP70_logo_prob.png b/data/predictions/ZAP70/ZAP70_logo_prob.png index efd3b0d..35dae84 100644 Binary files a/data/predictions/ZAP70/ZAP70_logo_prob.png and b/data/predictions/ZAP70/ZAP70_logo_prob.png differ diff --git a/data/predictions/ZAP70/metadata.json b/data/predictions/ZAP70/metadata.json index 749ca29..ac486e2 100644 --- a/data/predictions/ZAP70/metadata.json +++ b/data/predictions/ZAP70/metadata.json @@ -1 +1 @@ -{"rm_p":"No","npartners_with_sites":94,"npartners":119,"central_res":"Y","nsites":67,"type":"Tyrosine kinase","name":"ZAP70","ensp":"ENSP00000264972"} +{"rm_p":"No","npartners_with_sites":94,"npartners":119,"central_res":"Y","nsites":67,"type":"Tyrosine kinase","desc":"Tyrosine-protein kinase ZAP-70","family":"TK_Syk","name":"ZAP70","ensp":"ENSP00000264972"} diff --git a/data/tsv_data_all.zip b/data/tsv_data_all.zip index 1ca2fcb..6038211 100644 Binary files a/data/tsv_data_all.zip and b/data/tsv_data_all.zip differ diff --git a/index.html b/index.html index c14386d..a7f75bb 100644 --- a/index.html +++ b/index.html @@ -39,9 +39,8 @@ - - + @@ -51,7 +50,7 @@
-
+
@@ -82,8 +81,9 @@

Uncovering phosphorylation–based specificities

-
+
+

Select a prediction from the dropdown below to get started

@@ -92,14 +92,13 @@

Uncovering phosphorylation–based specificities -
+ -
+

Probability Logo @@ -240,6 +237,13 @@

Prediction logo Bits Logo + +

@@ -295,4 +299,5 @@

Prediction logo - \ No newline at end of file + + \ No newline at end of file diff --git a/js/functions.js b/js/functions.js index 31ba39d..17e8105 100644 --- a/js/functions.js +++ b/js/functions.js @@ -34,11 +34,8 @@ var processingComplete = function(){ } }; -function baseName(str) -{ +function baseName(str){ var base = new String(str).substring(str.lastIndexOf('/') + 1); - // if(base.lastIndexOf(".") != -1) - // base = base.substring(0, base.lastIndexOf(".")); return base; } @@ -50,15 +47,15 @@ $(function() { //****************************** $('.nav-pills li').click(function(){ - $("div[class*='menu-content-']").addClass('hide'); - $("." + $(this).attr('content')).removeClass('hide'); + $("div[class*='menu-content-']").hide(); + $("." + $(this).attr('content')).fadeIn(); $('.nav-pills li').removeClass('active'); $(this).addClass('active'); document.title = "kpred |" + $(this).text(); - if(PRED_NAME == "") $('#prediction-display').addClass('hide'); + if(PRED_NAME == "") $('#prediction-display').hide(); }); $('.nav-pills li.active').click(); @@ -99,10 +96,11 @@ $(function() { data:records, placeholder: "Select a prediction" }).on("change", function(e) { - // Show div if its hidden - $('#prediction-display').removeClass("hide"); - - PRED_NAME = e.added.text; + $("#select-a-prediction").slideUp("fast", function(){ + // Show div if its hidden + $('#prediction-display').slideDown(); + }); + PRED_NAME = e.added.gene_name; changePrediction(); }); @@ -129,6 +127,7 @@ function changePrediction() { $.getJSON(meta_path, function(data){ window.metadata = data; + $('#enzyme-fam').text(data.family.replace("_", " ")); $('#proline-rm').text(data.rm_p); $('#npartners-sites').text(data.npartners_with_sites); $('#npartners-all').text(data.npartners); @@ -146,7 +145,6 @@ function changePrediction() { tsv_path = [base, data.name+"_data.tsv"].join("/"); - console.log((tsv_path)); $('#logo-bits-dl').attr('href', bits_pdf_path).attr('download', baseName(bits_pdf_path)); $('#logo-prob-dl').attr('href', prob_pdf_path).attr('download', baseName(prob_pdf_path)); @@ -212,11 +210,12 @@ function changePrediction() { // COLOR SITES :) for(var i = 0; i < records.length; i++){ - records[i].sub_region = colorSequence(records[i].flank, pos_and_char); + records[i].flank = colorSequence(records[i].flank, pos_and_char); string_link = sprintf("http://string-db.org/version_9_1/newstring_cgi/show_network_section.pl?all_channels_on=0&identifiers=9606.%s%%0D9606.%s", metadata.ensp, records[i].prot_id) records[i].string_score_link = sprintf('%s', string_link, records[i].string_score); prot_link = sprintf("http://string-db.org/version_9_1/newstring_cgi/show_network_section.pl?all_channels_on=0&identifiers=9606.%s", records[i].prot_id); records[i].prot_name = sprintf('%s', prot_link, records[i].prot_name); + //if(i==0) console.log(records[i]) } dynatable = $('#sites-table').dynatable({ dataset: { diff --git a/test.zip b/test.zip deleted file mode 100644 index bed9360..0000000 Binary files a/test.zip and /dev/null differ diff --git a/tutorial/kpred_data.zip b/tutorial/kpred_data.zip index f3ff99e..9673f79 100644 Binary files a/tutorial/kpred_data.zip and b/tutorial/kpred_data.zip differ