Eclipse CDT + CMake: Eclipse index unable to resolve header files

[pallavg]

Describe the bug
I am using Eclipse 2024-03. I have set it up to build a C++ project with CMake. The build directory and source tree are at the same level. The build works OK. Navigation, code assists, etc are all OK.

The only issue is that the indexer is not able to resolve include files outside the source tree. For example C++/Boost headers.

To Reproduce

Expected behavior
CDT should be able to resolve the header information

Screenshots
See post: https://stackoverflow.com/questions/78241554/eclipse-cmake-eclipse-index-unable-to-resolve-header-files that contains the screenshot of hte issue.

Version Information (please complete the following information):

SUSE Linux Enterperise V12
Eclipse:
Version: 2024-03 (4.31.0)
Build id: 20240307-1437

Additional context

Full .cproject file in my build folder:

Note that the pathentry contains the path to the C++/boost headers (both directories exist and are readable).

<pathentry include="/nfs/site/disks/gsc_gwa002/pgupta6/fte_projects/cxx/include/stil" kind="inc" path="" system="true"/>
				<pathentry include="/usr/intel/pkgs/boost/1.75.0/include" kind="inc" path="" system="true"/>
				<pathentry include="/nfs/site/disks/gsc_gwa002/pgupta6/fte_projects/cxx/include" kind="inc" path="" system="true"/>
				<pathentry include="/nfs/site/itools/em64t_SLES12SP5/pkgs/gcc/9.2.0/include/c++/9.2.0" kind="inc" path="" system="true"/>
				<pathentry include="/nfs/site/itools/em64t_SLES12SP5/pkgs/gcc/9.2.0/include/c++/9.2.0/x86_64-suse-linux" kind="inc" path="" system="true"/>
				<pathentry include="/nfs/site/itools/em64t_SLES12SP5/pkgs/gcc/9.2.0/include/c++/9.2.0/backward" kind="inc" path="" system="true"/>
				<pathentry include="/nfs/site/itools/em64t_SLES12SP5/pkgs/gcc/9.2.0/lib64/gcc/x86_64-suse-linux/9.2.0/include" kind="inc" path="" system="true"/>
				<pathentry include="/nfs/site/itools/em64t_SLES12SP5/pkgs/gcc/9.2.0/lib64/gcc/x86_64-suse-linux/9.2.0/include-fixed" kind="inc" path="" system="true"/>

<?xml version="1.0" encoding="UTF-8"?>
<?fileVersion 4.0.0?>
<cproject>
	<storageModule moduleId="org.eclipse.cdt.core.settings">
		<cconfiguration id="org.eclipse.cdt.core.default.config.1">
			<storageModule buildSystemId="org.eclipse.cdt.core.defaultConfigDataProvider" id="org.eclipse.cdt.core.default.config.1" moduleId="org.eclipse.cdt.core.settings" name="Configuration">
				<externalSettings/>
				<extensions>
					<extension id="org.eclipse.cdt.core.ELF" point="org.eclipse.cdt.core.BinaryParser"/>
					<extension id="org.eclipse.cdt.core.GNU_ELF" point="org.eclipse.cdt.core.BinaryParser">
						<attribute key="addr2line" value="addr2line"/>
						<attribute key="c++filt" value="c++filt"/>
					</extension>
				</extensions>
			</storageModule>
			<storageModule moduleId="org.eclipse.cdt.core.language.mapping">
				<project-mappings/>
			</storageModule>
			<storageModule moduleId="org.eclipse.cdt.core.externalSettings"/>
			<storageModule moduleId="org.eclipse.cdt.core.pathentry">
				<pathentry kind="src" path="[Subprojects]"/>
				<pathentry kind="src" path="[Source directory]"/>
				<pathentry excluding="[Source directory]/|**/CMakeFiles/" kind="out" path=""/>
				<pathentry kind="mac" name="__STDC__" path="" value="1"/>
				<pathentry kind="mac" name="__cplusplus" path="" value="201402L"/>
				<pathentry kind="mac" name="__STDC_UTF_16__" path="" value="1"/>
				<pathentry kind="mac" name="__STDC_UTF_32__" path="" value="1"/>
				<pathentry kind="mac" name="__STDC_HOSTED__" path="" value="1"/>
				<pathentry kind="mac" name="__GNUC__" path="" value="9"/>
				<pathentry kind="mac" name="__GNUC_MINOR__" path="" value="2"/>
				<pathentry kind="mac" name="__GNUC_PATCHLEVEL__" path="" value="0"/>
				<pathentry kind="mac" name="__VERSION__" path="" value="&quot;9.2.0&quot;"/>
				<pathentry kind="mac" name="__ATOMIC_RELAXED" path="" value="0"/>
				<pathentry kind="mac" name="__ATOMIC_SEQ_CST" path="" value="5"/>
				<pathentry kind="mac" name="__ATOMIC_ACQUIRE" path="" value="2"/>
				<pathentry kind="mac" name="__ATOMIC_RELEASE" path="" value="3"/>
				<pathentry kind="mac" name="__ATOMIC_ACQ_REL" path="" value="4"/>
				<pathentry kind="mac" name="__ATOMIC_CONSUME" path="" value="1"/>
				<pathentry kind="mac" name="__FINITE_MATH_ONLY__" path="" value="0"/>
				<pathentry kind="mac" name="_LP64" path="" value="1"/>
				<pathentry kind="mac" name="__LP64__" path="" value="1"/>
				<pathentry kind="mac" name="__SIZEOF_INT__" path="" value="4"/>
				<pathentry kind="mac" name="__SIZEOF_LONG__" path="" value="8"/>
				<pathentry kind="mac" name="__SIZEOF_LONG_LONG__" path="" value="8"/>
				<pathentry kind="mac" name="__SIZEOF_SHORT__" path="" value="2"/>
				<pathentry kind="mac" name="__SIZEOF_FLOAT__" path="" value="4"/>
				<pathentry kind="mac" name="__SIZEOF_DOUBLE__" path="" value="8"/>
				<pathentry kind="mac" name="__SIZEOF_LONG_DOUBLE__" path="" value="16"/>
				<pathentry kind="mac" name="__SIZEOF_SIZE_T__" path="" value="8"/>
				<pathentry kind="mac" name="__CHAR_BIT__" path="" value="8"/>
				<pathentry kind="mac" name="__BIGGEST_ALIGNMENT__" path="" value="16"/>
				<pathentry kind="mac" name="__ORDER_LITTLE_ENDIAN__" path="" value="1234"/>
				<pathentry kind="mac" name="__ORDER_BIG_ENDIAN__" path="" value="4321"/>
				<pathentry kind="mac" name="__ORDER_PDP_ENDIAN__" path="" value="3412"/>
				<pathentry kind="mac" name="__BYTE_ORDER__" path="" value="__ORDER_LITTLE_ENDIAN__"/>
				<pathentry kind="mac" name="__FLOAT_WORD_ORDER__" path="" value="__ORDER_LITTLE_ENDIAN__"/>
				<pathentry kind="mac" name="__SIZEOF_POINTER__" path="" value="8"/>
				<pathentry kind="mac" name="__GNUG__" path="" value="9"/>
				<pathentry kind="mac" name="__SIZE_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__PTRDIFF_TYPE__" path="" value="long int"/>
				<pathentry kind="mac" name="__WCHAR_TYPE__" path="" value="int"/>
				<pathentry kind="mac" name="__WINT_TYPE__" path="" value="unsigned int"/>
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				<pathentry kind="mac" name="__UINTMAX_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__CHAR16_TYPE__" path="" value="short unsigned int"/>
				<pathentry kind="mac" name="__CHAR32_TYPE__" path="" value="unsigned int"/>
				<pathentry kind="mac" name="__SIG_ATOMIC_TYPE__" path="" value="int"/>
				<pathentry kind="mac" name="__INT8_TYPE__" path="" value="signed char"/>
				<pathentry kind="mac" name="__INT16_TYPE__" path="" value="short int"/>
				<pathentry kind="mac" name="__INT32_TYPE__" path="" value="int"/>
				<pathentry kind="mac" name="__INT64_TYPE__" path="" value="long int"/>
				<pathentry kind="mac" name="__UINT8_TYPE__" path="" value="unsigned char"/>
				<pathentry kind="mac" name="__UINT16_TYPE__" path="" value="short unsigned int"/>
				<pathentry kind="mac" name="__UINT32_TYPE__" path="" value="unsigned int"/>
				<pathentry kind="mac" name="__UINT64_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__INT_LEAST8_TYPE__" path="" value="signed char"/>
				<pathentry kind="mac" name="__INT_LEAST16_TYPE__" path="" value="short int"/>
				<pathentry kind="mac" name="__INT_LEAST32_TYPE__" path="" value="int"/>
				<pathentry kind="mac" name="__INT_LEAST64_TYPE__" path="" value="long int"/>
				<pathentry kind="mac" name="__UINT_LEAST8_TYPE__" path="" value="unsigned char"/>
				<pathentry kind="mac" name="__UINT_LEAST16_TYPE__" path="" value="short unsigned int"/>
				<pathentry kind="mac" name="__UINT_LEAST32_TYPE__" path="" value="unsigned int"/>
				<pathentry kind="mac" name="__UINT_LEAST64_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__INT_FAST8_TYPE__" path="" value="signed char"/>
				<pathentry kind="mac" name="__INT_FAST16_TYPE__" path="" value="long int"/>
				<pathentry kind="mac" name="__INT_FAST32_TYPE__" path="" value="long int"/>
				<pathentry kind="mac" name="__INT_FAST64_TYPE__" path="" value="long int"/>
				<pathentry kind="mac" name="__UINT_FAST8_TYPE__" path="" value="unsigned char"/>
				<pathentry kind="mac" name="__UINT_FAST16_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__UINT_FAST32_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__UINT_FAST64_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__INTPTR_TYPE__" path="" value="long int"/>
				<pathentry kind="mac" name="__UINTPTR_TYPE__" path="" value="long unsigned int"/>
				<pathentry kind="mac" name="__has_include(STR)" path="" value="__has_include__(STR)"/>
				<pathentry kind="mac" name="__has_include_next(STR)" path="" value="__has_include_next__(STR)"/>
				<pathentry kind="mac" name="__GXX_WEAK__" path="" value="1"/>
				<pathentry kind="mac" name="__DEPRECATED" path="" value="1"/>
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				<pathentry kind="mac" name="__GXX_EXPERIMENTAL_CXX0X__" path="" value="1"/>
				<pathentry kind="mac" name="__cpp_binary_literals" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_hex_float" path="" value="201603"/>
				<pathentry kind="mac" name="__cpp_runtime_arrays" path="" value="198712"/>
				<pathentry kind="mac" name="__cpp_unicode_characters" path="" value="200704"/>
				<pathentry kind="mac" name="__cpp_raw_strings" path="" value="200710"/>
				<pathentry kind="mac" name="__cpp_unicode_literals" path="" value="200710"/>
				<pathentry kind="mac" name="__cpp_user_defined_literals" path="" value="200809"/>
				<pathentry kind="mac" name="__cpp_lambdas" path="" value="200907"/>
				<pathentry kind="mac" name="__cpp_range_based_for" path="" value="200907"/>
				<pathentry kind="mac" name="__cpp_static_assert" path="" value="200410"/>
				<pathentry kind="mac" name="__cpp_decltype" path="" value="200707"/>
				<pathentry kind="mac" name="__cpp_attributes" path="" value="200809"/>
				<pathentry kind="mac" name="__cpp_rvalue_reference" path="" value="200610"/>
				<pathentry kind="mac" name="__cpp_rvalue_references" path="" value="200610"/>
				<pathentry kind="mac" name="__cpp_variadic_templates" path="" value="200704"/>
				<pathentry kind="mac" name="__cpp_initializer_lists" path="" value="200806"/>
				<pathentry kind="mac" name="__cpp_delegating_constructors" path="" value="200604"/>
				<pathentry kind="mac" name="__cpp_nsdmi" path="" value="200809"/>
				<pathentry kind="mac" name="__cpp_inheriting_constructors" path="" value="201511"/>
				<pathentry kind="mac" name="__cpp_ref_qualifiers" path="" value="200710"/>
				<pathentry kind="mac" name="__cpp_alias_templates" path="" value="200704"/>
				<pathentry kind="mac" name="__cpp_return_type_deduction" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_init_captures" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_generic_lambdas" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_constexpr" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_decltype_auto" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_aggregate_nsdmi" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_variable_templates" path="" value="201304"/>
				<pathentry kind="mac" name="__cpp_digit_separators" path="" value="201309"/>
				<pathentry kind="mac" name="__cpp_sized_deallocation" path="" value="201309"/>
				<pathentry kind="mac" name="__cpp_threadsafe_static_init" path="" value="200806"/>
				<pathentry kind="mac" name="__EXCEPTIONS" path="" value="1"/>
				<pathentry kind="mac" name="__cpp_exceptions" path="" value="199711"/>
				<pathentry kind="mac" name="__GXX_ABI_VERSION" path="" value="1013"/>
				<pathentry kind="mac" name="__SCHAR_MAX__" path="" value="0x7f"/>
				<pathentry kind="mac" name="__SHRT_MAX__" path="" value="0x7fff"/>
				<pathentry kind="mac" name="__INT_MAX__" path="" value="0x7fffffff"/>
				<pathentry kind="mac" name="__LONG_MAX__" path="" value="0x7fffffffffffffffL"/>
				<pathentry kind="mac" name="__LONG_LONG_MAX__" path="" value="0x7fffffffffffffffLL"/>
				<pathentry kind="mac" name="__WCHAR_MAX__" path="" value="0x7fffffff"/>
				<pathentry kind="mac" name="__WCHAR_MIN__" path="" value="(-__WCHAR_MAX__ - 1)"/>
				<pathentry kind="mac" name="__WINT_MAX__" path="" value="0xffffffffU"/>
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				<pathentry kind="mac" name="__PTRDIFF_MAX__" path="" value="0x7fffffffffffffffL"/>
				<pathentry kind="mac" name="__SIZE_MAX__" path="" value="0xffffffffffffffffUL"/>
				<pathentry kind="mac" name="__SCHAR_WIDTH__" path="" value="8"/>
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				<pathentry kind="mac" name="__PTRDIFF_WIDTH__" path="" value="64"/>
				<pathentry kind="mac" name="__SIZE_WIDTH__" path="" value="64"/>
				<pathentry kind="mac" name="__GLIBCXX_TYPE_INT_N_0" path="" value="__int128"/>
				<pathentry kind="mac" name="__GLIBCXX_BITSIZE_INT_N_0" path="" value="128"/>
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				<pathentry kind="mac" name="__INTMAX_C(c)" path="" value="c ## L"/>
				<pathentry kind="mac" name="__UINTMAX_MAX__" path="" value="0xffffffffffffffffUL"/>
				<pathentry kind="mac" name="__UINTMAX_C(c)" path="" value="c ## UL"/>
				<pathentry kind="mac" name="__INTMAX_WIDTH__" path="" value="64"/>
				<pathentry kind="mac" name="__SIG_ATOMIC_MAX__" path="" value="0x7fffffff"/>
				<pathentry kind="mac" name="__SIG_ATOMIC_MIN__" path="" value="(-__SIG_ATOMIC_MAX__ - 1)"/>
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				<pathentry kind="mac" name="__UINT64_MAX__" path="" value="0xffffffffffffffffUL"/>
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[DanielGibson]

I have the same problem with Eclipse 2024-12.
I used New C/C++ Project -> Empty or Existing CMake Project to load a relatively simple existing CMake project.
That basically works, it shows the project's files and I could even build.

But it doesn't find any system includes, and I found no way to configure include paths (as I could when manually creating a C/C++ project that doesn't use CMake).
It doesn't even show that "Includes" node in the Project Explorer that other C/C++ projects have.

Am I doing something wrong?
I somehow can't believe CDT would ship CMake "support" where you can't use any standard- or system-types or -includes?

[jonahgraham]

@betamaxbandit do you think the improvements made in #1000 for CDT 12 help the issues raised here?

[betamaxbandit]

@betamaxbandit do you think the improvements made in #1000 for CDT 12 help the issues raised here?

Hi @jonahgraham ,

Short answer, no.
However, I don't really understand exactly what these issues are.

[betamaxbandit]

... long answer.

I'm not familiar with the type of project being used here. It does not look like a regular CDT CMake project to me; the .cproject file of a CMake project has barely any content and the screenshot on stackoverflow shows a project that looks like an Executable or Standard Build project (it has Build Target node and Includes node).

I created a Boost example CDT CMake project [1] and after building the project the Boost header was resolved. This was the case using CDT 11.6 and 12.0.

I'll take you through my experience with this.

I created a Boost example CDT CMake project [1].
Initially the workbench looks like this:

Notice the "Unresolved inclusion..." and the "Symbol ... could not be resolved" markers. These are expected until the project is built.

I built the project successfully and the "Unresolved inclusion..." disappeared. I am able to click on a header and Open Declaration F3, which successfully opens header file in the editor.

Sometimes, the other "Symbol ... could not be resolved" markers remain. This is a bug (#376) in CDT and should be fixed!
To work around this, in the Project Explorer, right click the project and choose Index > Rebuild. "C/C++ Indexer" progress can be observed in the status bar and after a while the "Symbol ... could not be resolved" markers disappear.

I can then navigate to source functions, for example F3 on lambda on line 8 shows the Open Declaration dialog.

[1]: Example Boost CDT CMake project
I did this on Windows 10.
a) Download Boost package from the download like on https://www.boost.org/doc/libs/1_87_0/more/getting_started/windows.html
b) Unzip Boost package into C:_dev\Boost\boost_1_82_0
c) On host, install toolchain, make and ninja by following the CDT help page C/C++ Development User Guide > "Before you begin", using the MSYS2 software distribution.

d) Launch Eclipse CDT 12.0.0 and create a new C/C++ project > Empty or Existing CMake project.
e) Create a file called boostExample.cpp and add the following content:

#include <boost/lambda/lambda.hpp>
#include <iostream>
#include <iterator>
#include <algorithm>

int main()
{
    using namespace boost::lambda;
    typedef std::istream_iterator<int> in;

    std::for_each(
        in(std::cin), in(), std::cout << (_1 * 3) << " " );
}

f) Create a file called CMakeLists.txt and add the following content:

cmake_minimum_required(VERSION 3.10)

project (boostExample)

add_executable(${PROJECT_NAME} boostExample.cpp)

target_include_directories(${PROJECT_NAME}
  PUBLIC C:/_dev/Boost/boost_1_82_0)

g) Build the project using the Launch Bar build button.
This is the console output:

Configuring in: C:\Users\betamax\cdt-main20250110b\runtime-cdtruntime3\boostExample\build\cmake.run.win32.x86_64.Local
cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_EXPORT_COMPILE_COMMANDS=ON -G Ninja C:\Users\betamax\cdt-main20250110b\runtime-cdtruntime3\boostExample
-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: C:/msys64/ucrt64/bin/cc.exe - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: C:/msys64/ucrt64/bin/c++.exe - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done (6.3s)
-- Generating done (0.3s)
-- Build files have been written to: C:/Users/betamax/cdt-main20250110b/runtime-cdtruntime3/boostExample/build/cmake.run.win32.x86_64.Local
Building in: C:\Users\betamax\cdt-main20250110b\runtime-cdtruntime3\boostExample\build\cmake.run.win32.x86_64.Local
cmake --build . --target all
[1/2] Building CXX object CMakeFiles/boostExample.dir/boostExample.cpp.obj
[2/2] Linking CXX executable boostExample.exe
Build complete (0 errors, 0 warnings): C:\Users\betamax\cdt-main20250110b\runtime-cdtruntime3\boostExample\build\cmake.run.win32.x86_64.Local

The project archive is attached here:

boostExample.zip

[betamaxbandit]

If the OP still has problems with this, perhaps they can attach an example CDT project which demonstrates the problem.