Problem with multigrapher

[nlapalu]

Hi Siegfried,

I'm able to run grapher on a 2 gfa files in gfa v1.0 from Minigraph Cactus and pggb

pancat grapher zt_mc.full.v1.0.gfa view.html -r CHR_5 -s 100000 -e 101000 -b 50 1000
pancat grapher pggb.gfa view2.html -r CHR_5 -s 100000 -e 101000 -b 50 1000

Then I launched the compare tool to obtain the distances:

pancat compare -c 2 -t zt_mc.full.v1.0.gfa pggb.gfa -o compare.json -g
Paths of Graph_A 1A5#0#1A5.CHR_5#0, 1E4#0#1E4.CHR_5#0, 3D1#0#3D1.CHR_5#0, 3D7#0#3D7.CHR_5#0, AUS01#0#AUS01.CHR_5#0, CHR_5, TN09.CHR_5, YEQ92#0#YEQ92.CHR_5#0
Paths of Graph_B AUS01#0#AUS01.CHR_5#0, CHR_5, 1A5#0#1A5.CHR_5#0, 1E4#0#1E4.CHR_5#0, 3D1#0#3D1.CHR_5#0, 3D7#0#3D7.CHR_5#0, TN09.CHR_5, YEQ92#0#YEQ92.CHR_5#0
PATH INTERSECTION: {'3D1#0#3D1.CHR_5#0', '3D7#0#3D7.CHR_5#0', '1E4#0#1E4.CHR_5#0', 'CHR_5', 'YEQ92#0#YEQ92.CHR_5#0', 'AUS01#0#AUS01.CHR_5#0', '1A5#0#1A5.CHR_5#0', 'TN09.CHR_5'}

When I try to launch multigrapher:

pancat multigrapher zt_mc.full.v1.0.gfa pggb.gfa compare.json view.html -r CHR_5 -s 100000 -e 101000 -b 50 1000

Une petite idée du problème.
Merci
+

[dubssieg]

Hello, I could easily replicate this on my side.
Happens to be an unpacking error when specifying start and end points, where I messed up in the case of multigrapher.
Sorry for the inconvenience, I should work perfectly fine now!

LMK if you still have trouble, otherwise feel free to close the issue.

[nlapalu]

Hi Siegfried,

New stack trace:

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