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release_notes_2_7_0.html
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
<link href="css/main.css" type="text/css" rel="stylesheet"
media="screen">
<title>Cytoscape Release Notes</title>
<script type="text/javascript"
src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.2/jquery.min.js"></script>
<script type="text/javascript"
src="http://ajax.googleapis.com/ajax/libs/jqueryui/1.8.1/jquery-ui.min.js"></script>
<script type="text/javascript" src="js/global_variables.js"></script>
<script type="text/javascript" src="js/menu_generator.js"></script>
</head>
<body>
<div id="container"><script src="js/header.js"></script>
<div id="documents">
<p>
<h1>New Features in Cytoscape 2.7.0</h1>
</p>
<p>
<h3>Nested Networks</h3>
<p>
A node may now have a reference to another Network, which allows us to
capture the relationships between networks in networks themselves. This
feature includes a new file format (NNF) for nested network I/O and
direct nested network editing via the Editor and Right-click menu. A
Visual Property has been added to provide control of the visualization
of the nested network.
</p>
<h3>New Edge Types</h3>
<p>
Several new edge types between solid and dashed have been added.
</p>
<h3>Newlines and list editing in attribute browser</h3>
<p>
The attribute browser has been updated to allow newline characters to be
added by pressing the "Enter" key. List editing is now also enabled.
</p>
<h3>Automatic label wrap</h3>
<p>
A new visual property has been added that sets the width of a label. Any
label extending beyond this width will be automatically wrapped.
</p>
<h3>Arrow color optionally locked to edge color</h3>
<p>
Arrow color may now be bound to the edge color by checking a box in the
Dependencies pane of the Default Appearance Browser in the VizMapper,
which avoids the necessity of creating separate-yet-identical mappings
for edge, source, and target arrows.
</p>
<h3>CyCommandHandlers</h3>
<p>
Addition of a mechanism to the core to provide inter-plugin
communication
</p>
<h3>BioPAX Level 3 support</h3>
</p>
</div>
<script src="js/footer.js"></script></div>
</body>
</html>