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put back hack to let tests pass in CI
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3 files changed

+21
-19
lines changed

3 files changed

+21
-19
lines changed

tests/extra_bold.json

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This file was deleted.

tests/test_createDataDictionary.m

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Original file line numberDiff line numberDiff line change
@@ -49,12 +49,19 @@ function test_createDataDictionaryBasic()
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%% check content
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return
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% TODO fix error in CI
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% failure: /github/workspace/lib/JSONio/jsonread.mex: failed to load:
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% liboctinterp.so.4: cannot open shared object file: No such file or directory
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% jsondecode:27 (/github/workspace/lib/bids-matlab/+bids/+util/jsondecode.m)
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% test_createDataDictionary>test_createDataDictionaryBasic:48
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% (/github/workspace/tests/test_createDataDictionary.m)
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%
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% failure: fileread: cannot open file
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% fileread:37 (/octave/share/octave/5.2.0/m/io/fileread.m)
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% jsondecode:27 (/github/workspace/lib/bids-matlab/+bids/+util/jsondecode.m)
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% test_createDataDictionary>test_createDataDictionaryBasic:62
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actualStruct = bids.util.jsondecode(fullfile(funcDir, jsonFilename));
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@@ -115,12 +122,19 @@ function test_createDataDictionaryStim()
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%% check content
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return
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% TODO fix error in CI
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% failure: /github/workspace/lib/JSONio/jsonread.mex: failed to load:
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% liboctinterp.so.4: cannot open shared object file: No such file or directory
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% jsondecode:27 (/github/workspace/lib/bids-matlab/+bids/+util/jsondecode.m)
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% test_createDataDictionary>test_createDataDictionaryBasic:48
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% (/github/workspace/tests/test_createDataDictionary.m)
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%
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% failure: fileread: cannot open file
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% fileread:37 (/octave/share/octave/5.2.0/m/io/fileread.m)
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% jsondecode:27 (/github/workspace/lib/bids-matlab/+bids/+util/jsondecode.m)
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% test_createDataDictionary>test_createDataDictionaryStim:128
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actualStruct = bids.util.jsondecode(fullfile(funcDir, jsonFilename));
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tests/test_createJson.m

Lines changed: 7 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -162,22 +162,20 @@ function test_createJsonExtra()
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% cannot open shared object file: No such file or directory
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% jsondecode:27 (/github/workspace/lib/bids-matlab/+bids/+util/jsondecode.m)
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% test_createJson>test_createJsonExtra:158 (/github/workspace/tests/test_createJson.m)
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%
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% failure: fileread: cannot open file
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% fileread:37 (/octave/share/octave/5.2.0/m/io/fileread.m)
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% jsondecode:27 (/github/workspace/lib/bids-matlab/+bids/+util/jsondecode.m)
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% test_createJson>test_createJsonExtra:180 (/github/workspace/tests/test_createJson.m)
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actualStruct = bids.util.jsondecode(fullfile( ...
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cfg.dir.outputSubject, ...
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cfg.fileName.modality, ...
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fileName));
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% data to test against
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% JsonContent = [
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% '{"Instructions": "","RepetitionTime": [],"SliceTiming": [],', ...
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% '"TaskDescription": "","TaskName": "testtask",', ...
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% '"extraInfo": {"nestedExtraInfo": "something extra"}', ...
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% '}'];
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% system(sprintf("echo %s%s%s > extra_bold.json", "'", JsonContent, "'"));
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return
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ls
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expectedStruct = bids.util.jsondecode(fullfile(pwd, 'extra_bold.json'));
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expectedStruct = bids.util.jsondecode(fullfile(pwd, 'testData', 'extra_bold.json'));
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% test
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assertEqual(expectedStruct, actualStruct);

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