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Issues list

Variant spotters community announcement: new issue tracker for small, unclear, ambiguous, slow lineages
#1988 opened May 6, 2023 by FedeGueli
33 👍 3
XBB.1.5 sublineage with S:S494P and N:N77T/ORF9b:I74L (75 seqs as of 2023-05-12, mainly Singapore) partially designated Issues that have a designation associated with it but contain further proposals, should stay open XBB.1.5 Sublineage of XBB.1.5
#1910 opened Apr 18, 2023 by c19850727
9 👍 3
BUG: many sequence designations need to be updated to child lineages (e.g. BQ.1.3 --> BQ.1.3.2) correction Highlight an error in the description or definition
#2467 opened Jan 18, 2024 by AngieHinrichs
1 👍 2
PP.1 [LP.8.1.8 + S:T22N] with a S:D80G (14, 3 places) branch that gained further ORF1b:P2313S, S:W64G, N:R204P ( 11, 3 Places)
#2941 opened Apr 28, 2025 by FedeGueli
10 👍 2
EL.1 with orf1b:K82R (314 sequences, 33 with s:521s orf9b:i5t) XBB.1.5 Sublineage of XBB.1.5
#1946 opened Apr 23, 2023 by BorisUitham
10 👍 2
FP.1 sublineage with N:195S and ORF:8C (26 seqs as of 2023-05-19, Singapore)
#1993 opened May 13, 2023 by c19850727
3 👍 2
PQ.2+Orf3a:I20T(16 seqs, 5 places)
#2954 opened May 6, 2025 by xz-keg
26 👍 2
XEC.32 + S:A435S, S:K679R (13 seq, 7 countries)
#2949 opened May 1, 2025 by DoropFan
3 👍 1
JN.1.1/HW.1.1 (XBC.1.6.3.1.1) recombinant, Finland, 6 samples
#2489 opened Feb 10, 2024 by JosetteSchoenma
6 👍 1
Proposal to broaden BA.5.2.39 to incorporate West African sequences BA.5 correction Highlight an error in the description or definition
#1466 opened Dec 25, 2022 by silcn
1 👍 1
BF.7.14 with additional S:V445A, S:P561S and ORF3a:A72S (21 seqs as of 2023-04-20, China) BA.5 monitor currently too small, watch for future developments
#1758 opened Mar 15, 2023 by c19850727
7 👍 1
MZ.2 with pangolin UTR masking becomes parent of other MZ.*
#2918 opened Mar 20, 2025 by AngieHinrichs
👍 1
XEC.4/KP.3.2.3 recombinant(32 seqs, 3 places)
#2952 opened May 3, 2025 by xz-keg
👍 1
2 XEC.2.2 subbranches with S:T572I on T9508C branch (XEC.2.2.1 / 69, 7 countries, mainly in US)
#2908 opened Mar 8, 2025 by Walde1nsamkeit
11 👍 1
Another XBB.1.9.2 branch with s:456L and M:K15N (70 seq) low priority For issues that are low priority for now
#2269 opened Sep 6, 2023 by BorisUitham
1 👍 1
NY.11 + Orf1a:S994N + S:H146Y (38 seqs, 4 countries)
#2977 opened May 26, 2025 by cvejris
2 👍 1
Brazilian XBB.1.18.1 lineage with mutations S:F456L and NSP3:S1007N
#2225 opened Aug 28, 2023 by larboh-ioc
6 👍 1
XEC +Orf1a:A599T+ S:I68F(129 seqs, >10 places)
#2802 opened Oct 12, 2024 by xz-keg
32 👍 1
lineage notes curation
#2280 opened Sep 13, 2023 by RaphaelRaphael
4
GK.1 sublineage with ORF1a:T3287I (>220 seq) and a further sublineage with S:A475V (41 seq. Brazil, USA)
#2371 opened Nov 14, 2023 by oobb45729
2
Possible Incorrect Gene for XBB.1.16.16 Defining Mutation
#2094 opened Jul 14, 2023 by alurqu
6
NB.1.8.1+S:I478T cycle reversion(39 seqs,>10 places)
#2983 opened May 31, 2025 by xz-keg
1
FL.4.5 (XBB.1.9.1.4.5) sublineage with S:G181E (52 seqs mainly in Singapore)
#2054 opened Jun 13, 2023 by HynnSpylor
7
New XBB.1.5 + nsp2 E574D (15 sequences) monitor currently too small, watch for future developments
#1916 opened Apr 19, 2023 by VirologiaHUCA
4
CB.1 (BA.2.75.9.1) diversity issue
#1219 opened Oct 16, 2022 by corneliusroemer
1 task
3
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