normalize directory entries before executing an ExpressionTool (#1075)

mr-c · web-flow · commit 8f896370b043 · 2019-02-28T19:04:59.000+02:00
diff --git a/cwltool/command_line_tool.py b/cwltool/command_line_tool.py
@@ -97,6 +97,7 @@ def __init__(self,
 
         def run(self, runtimeContext):  # type: (RuntimeContext) -> None
             try:
+                normalizeFilesDirs(self.builder.job)
                 ev = self.builder.do_eval(self.script)
                 normalizeFilesDirs(ev)
                 self.output_callback(ev, "success")
