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lines changed Original file line number Diff line number Diff line change @@ -478,14 +478,18 @@ def arg_parser() -> argparse.ArgumentParser:
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conda_dependencies = argparse .SUPPRESS
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if SOFTWARE_REQUIREMENTS_ENABLED :
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- dependency_resolvers_configuration_help = "Dependency resolver "
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- "configuration file describing how to adapt 'SoftwareRequirement' "
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- "packages to current system."
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+ dependency_resolvers_configuration_help = (
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+ "Dependency resolver "
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+ "configuration file describing how to adapt 'SoftwareRequirement' "
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+ "packages to current system."
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+ )
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dependencies_directory_help = (
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- "Defaut root directory used by dependency resolvers configuration."
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+ "Default root directory used by dependency resolvers configuration."
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+ )
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+ use_biocontainers_help = (
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+ "Use biocontainers for tools without an "
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+ "explicitly annotated Docker container."
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)
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- use_biocontainers_help = "Use biocontainers for tools without an "
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- "explicitly annotated Docker container."
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conda_dependencies = (
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"Short cut to use Conda to resolve 'SoftwareRequirement' packages."
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)
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