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bcUMAP- Error in ScaleData(): #161

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elenagomezace opened this issue Sep 3, 2024 · 2 comments
Open

bcUMAP- Error in ScaleData(): #161

elenagomezace opened this issue Sep 3, 2024 · 2 comments

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@elenagomezace
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I am trying to perform a UMAP projection and compute therapeutic clusters using the bcUMAP function from the beyondcell package in R. However, I encounter an error that prevents the analysis from completing successfully.

Steps I’ve Taken:
I have preprocessed my data by normalizing and scaling it using the appropriate functions from the Seurat package.
I created a beyondcell object (bc) using the bcScore function with the necessary gene signatures.
When I attempt to run the bcUMAP function, I use the following command and this error appears

@valerychu
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I had the same issue.

@elenagomezace
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fix the problem with seurat version 4

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