Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Prep NAPPN TERRA REF workshop #379

Closed
1 of 2 tasks
KristinaRiemer opened this issue Feb 1, 2021 · 1 comment
Closed
1 of 2 tasks

Prep NAPPN TERRA REF workshop #379

KristinaRiemer opened this issue Feb 1, 2021 · 1 comment
Assignees
Labels
training DIAG teaching and training

Comments

@KristinaRiemer
Copy link
Member

KristinaRiemer commented Feb 1, 2021

Happening on Feb 19. Description below.

  • Update existing materials from 2019 webinars to use Dryad data
  • Run through material 2x moved to Review YABA PRs #287

Title: Using TERRA REF high throughput, sensor-collected plant data with R
Duration: ~2-4 hours
Description:
In this hands-on workshop, we will teach users how to access and use TERRA REF (terraref.org), the largest, highest resolution public domain reference dataset for phenomics (LeBauer et al., 2020). We will walk attendees through how to navigate, download, and use sensor, trait, and environmental data to understand plant growth and physiology. TERRA REF is a good use case for these kinds of datasets because it is publicly available, can be accessed using a common set of tools in the R programming language, and has a diverse array of additional data, from hyperspectral images to phenological measurements to genomic sequences. Expected outcomes from this workshop include making this specific dataset usable and used by more researchers who could benefit from it, and more generally empowering scientists to become comfortable with using tools and technologies needed to access similar large, high-throughput datasets that have been collected and made available by others. This workshop will be based on previously presented material (https://github.com/terraref/tutorials/tree/master/videos, terraref.org/tutorials), which has been taught successfully in past virtual webinars, that will be updated and simplified now that the data is in the public domain.

@KristinaRiemer KristinaRiemer self-assigned this Feb 1, 2021
@KristinaRiemer KristinaRiemer added the training DIAG teaching and training label Feb 1, 2021
@KristinaRiemer
Copy link
Member Author

Complete draft of notes

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
training DIAG teaching and training
Projects
None yet
Development

No branches or pull requests

1 participant