DESCRIPTION

Package: MicrobiomeStat
Type: Package
Title: Comprehensive Statistical and Visualization Methods for Microbiome and Multi-Omics Data
Version: 1.2.1
Authors@R: c(
              person("Xianyang", "Zhang", role = "aut", email = "zhangxiany@stat.tamu.edu"),
              person("Jun", "Chen", role = c("aut", "cre"),
                     email = "chen.jun2@mayo.edu"),
              person("Huijuan", "Zhou", role = "ctb"),
              person("Caffery(Chen)", "Yang", role = "aut", email = "cafferychen777@tamu.edu"))
Author: Xianyang Zhang [aut],
  Jun Chen [aut, cre],
  Huijuan Zhou [ctb],
  Caffery(Chen) Yang [aut]
Maintainer: Jun Chen <chen.jun2@mayo.edu>
Description: A comprehensive toolkit for advanced, longitudinal microbiome and multi-omics data analysis. Specializing in in-depth longitudinal microbiome analysis for precise data interpretation across time. Generate professional analysis reports with just a click through the One Click feature. Delivers robust solutions for diverse analytic scenarios and effortless handling of multi-omics data, amplifying research efficiency. The user-friendly design, diverse features, and practical use cases assist researchers in navigating microbiome data complexities, delivering meaningful insights for longitudinal studies.
BugReports: https://github.com/cafferychen777/MicrobiomeStat/issues
URL: https://cafferychen777.github.io/MicrobiomeStat/
Depends: 
    R (>= 3.5.0),
    rlang, 
    tibble
Imports: 
    ggplot2,
    matrixStats,
    lmerTest,
    foreach,
    modeest,
    vegan,
    dplyr,
    pheatmap,
    tidyr,
    ggh4x,
    ape,
    GUniFrac,
    scales,
    stringr,
    rmarkdown,
    knitr,
    pander,
    tinytex
Suggests:
    ggrepel,
    parallel,
    ggprism,
    aplot,
    yaml,
    biomformat,
    Biostrings,
    ggtree,
    ggtreeExtra,
    testthat (>= 3.0.0)
Config/testthat/edition: 3
Config/build/clean-inst-doc: TRUE
Config/build/clean-docs-in-inst: TRUE
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2