Implement QC functions for profiling

[shntnu]

The purpose of this issue is to create a list. Once we settle on a list, we will close the issue and create an issue per QC item. We also need to decide where to implement this – here or in http://github.com/CellProfiler/cytominer

• Plot illumination corrections functions
• Plot salient features on a plate map to see if there are any trends
  • Cell count
  • IntegratedIntensity
  • PercentMaximal
• Show excluded wells on a plate map
• Check for rotation of the plate layout
  • Plate map with cell counts
  • Cluster all the wells across plates

[shntnu]

For each plate show the signature strength/reproducibility metric as a heatmap, so that you can see whether bad/good samples fall on certain plates or certain regions of plates
This could also help diagnose metadata problems

[mrohban]

heat map plot for the locations of 2N and 4N peaks in the DNA integrated intensity would help to find out how the segmentation worked

[shntnu]

Histogram of all features from a single well – this one had a few outlier features, post normalization. Should we flag these wells?