Search results

Standardized denoising strategies with fMRIprep

bhg:mtl_can_1

modality:fMRI

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

programming:shell_scripting

programming:workflowsnextflownextflow

project

project_tools_skills:familiar

project_type:coding_methods

project_type:documentation

status:published

tools:fMRIPrep

topic:reproducible_scientific_methods

Status: Open.

#126 In brainhackorg/global2020;

· lunebellec opened on Feb 15, 2021

Bayesian Hierarchical Microstructure Modelling in the Brain

bhg:micro2macro_gbr_1

git_skills:0_none

git_skills:1_commit_push

git_skills:2_branches_PRs

modality:DWI

modality:MRI

programming:Python

programming:Unix_command_line

project

project_development_status:0_concept_no_content

project_tools_skills:comfortable

project_tools_skills:expert

project_tools_skills:familiar

project_type:coding_methods

project_type:method_development

status:published

tools:Jupyter

topic:Bayesian_approaches

topic:diffusion

topic:statistical_modelling

Status: Open.

#112 In brainhackorg/global2020;

· PaddySlator opened on Jan 22, 2021

Fantastic measures and how to repeat them: tractography-based test retest reproducibility of microstructural MRI

bhg:micro2macro_gbr_1

git_skills:0_none

modality:DWI

modality:MRI

programming:Matlab

programming:R

project

project_development_status:2_releases_existing

project_tools_skills:comfortable

project_tools_skills:familiar

project_type:coding_methods

status:published

tools:FSL

tools:MRtrix

topic:connectome

topic:data_visualisation

topic:diffusion

topic:hypothesis_testing

topic:MR_methodologies

topic:reproducible_scientific_methods

Status: Open.

#108 In brainhackorg/global2020;

· KristinKoller opened on Jan 20, 2021

Implementation of soma and neurite density imaging (SANDI) in the accelerated microstructure imaging via convex optimization (AMICO) framework

bhg:micro2macro_gbr_1

git_skills:0_none

modality:DWI

modality:MRI

programming:Python

project

project_development_status:1_basic structure

project_tools_skills:familiar

project_type:coding_methods

project_type:pipeline_development

status:published

tools:DIPY

tools:FSL

tools:Jupyter

topic:diffusion

topic:MR_methodologies

Status: Open.

#104 In brainhackorg/global2020;

· palombom opened on Jan 15, 2021

Baby Steps Towards De-Sci (Decentralized Science) with Datalad + git annex + IPFS (Interplanetary File Storage System)

bhg:washingtondc_usa_1

git_skills:2_branches_PRs

programming:Python

programming:shell_scripting

programming:Unix_command_line

programming:Web

project

project_development_status:0_concept_no_content

project_tools_skills:familiar

project_tools_skills:none

project_type:coding_methods

project_type:data_managementinvolves programminginvolves programming

status:published

tools:BIDS

tools:Datalad

tools:Jupyter

topic:reproducible_scientific_methods

Status: Open.

#95 In brainhackorg/global2020;

· hebbianloop opened on Dec 11, 2020

Neuroimaging Cookbook 🧠🍳📓

bhg:mtl_can_1

bhg:washingtondc_usa_1

git_skills:0_none

git_skills:1_commit_push

git_skills:2_branches_PRs

git_skills:3_continuous_integration

modality:behavioral

modality:DWI

modality:ECOG

modality:EEG

modality:fMRI

modality:fNIRS

modality:MEG

modality:MRI

modality:PET

programming:C++

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:JavaJS/HTML/CSS, Django or othersJS/HTML/CSS, Django or others

programming:Julia

programming:Matlab

Status: Open.

#93 In brainhackorg/global2020;

· shawnrhoads opened on Dec 11, 2020

Prediction of Personality using Diffusion MRI Local Connectome Fingerprints

bhg:pittsburgh_usa_1

git_skills:0_none

modality:behavioral

modality:DWI

modality:MRI

programming:Matlab

programming:Python

programming:R

project

project_tools_skills:comfortable

project_tools_skills:expert

project_tools_skills:familiar

project_type:coding_methods

project_type:data_managementinvolves programminginvolves programming

project_type:method_development

status:published

topic:connectome

topic:deep_learning

topic:diffusion

topic:machine_learning

Status: Open.

#85 In brainhackorg/global2020;

· frankyeh opened on Dec 8, 2020

Brainhack Proceedings – an open & free journal for Brainhack project outcomes

bhg:ankara_tur_1

bhg:marseille_fra_1

bhg:ontario_can_1

git_skills:1_commit_push

programming:none

programming:Web

project

project_development_status:2_releases_existing

project_type:coding_methods

status:published

Status: Open.

#76 In brainhackorg/global2020;

· katjaq opened on Dec 2, 2020

Development of the SLAM -Surface anaLysis And Modeling- python package

bhg:marseille_fra_1

git_skills:0_none

git_skills:1_commit_push

git_skills:2_branches_PRs

git_skills:3_continuous_integration

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

programming:Unix_command_line

project

project_development_status:2_releases_existing

project_tools_skills:comfortable

project_tools_skills:expert

project_tools_skills:familiar

project_tools_skills:none

project_type:coding_methods

project_type:documentation

project_type:method_development

status:published

topic:data_visualisation

topic:reproducible_scientific_methods

Status: Open.

#70 In brainhackorg/global2020;

· alexpron opened on Dec 1, 2020

NeuroDesk - A flexible, scalable, and easy to use data analysis environment for reproducible neuroimaging

bhg:ankara_tur_1

git_skills:0_none

git_skills:1_commit_push

git_skills:2_branches_PRs

git_skills:3_continuous_integration

modality:DWI

modality:EEG

modality:fMRI

modality:MEG

modality:MRI

programming:containerizationDocker, SingularityDocker, Singularity

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:none

programming:Python

programming:shell_scripting

programming:Unix_command_line

programming:Web

programming:workflowsnextflownextflow

project

project_development_status:2_releases_existing

Status: Open.

#64 In brainhackorg/global2020;

· stebo85 opened on Nov 29, 2020

eeg-notebooks: a Python library for mobile EEG experiments and analysis

bhg:ontario_can_1

git_skills:2_branches_PRs

modality:behavioral

modality:EEG

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

project

project_development_status:2_releases_existing

project_tools_skills:familiar

project_type:coding_methods

project_type:data_managementinvolves programminginvolves programming

project_type:documentation

project_type:method_development

status:published

tools:Jupyter

tools:MNE

topic:data_visualisation

topic:EEG_EventRelatedResponseModelling

topic:machine_learning

topic:reproducible_scientific_methods

Status: Open.

#53 In brainhackorg/global2020;

· JohnGriffiths opened on Nov 22, 2020

physiopy/phys2bids use-case documentation

bhg:donostia_esp_1

git_skills:1_commit_push

git_skills:2_branches_PRs

modality:ECG

modality:fMRI

programming:documentationMarkdown, SphinxMarkdown, Sphinx

programming:Python

programming:shell_scripting

programming:workflowsnextflownextflow

project

project_development_status:1_basic structure

project_type:coding_methods

project_type:data_managementinvolves programminginvolves programming

project_type:documentation

project_type:method_development

project_type:pipeline_development

status:published

tools:BIDS

topic:physiology

Status: Open.

#46 In brainhackorg/global2020;

· sangfrois opened on Nov 1, 2020