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<!DOCTYPE HTML>
<!--
Phantom by HTML5 UP
html5up.net | @ajlkn
Free for personal and commercial use under the CCA 3.0 license (html5up.net/license)
-->
<html>
<head>
<title>Home</title>
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<div class="alert">
<!-- <span class="closebtn" onclick="this.parentElement.style.display='none';">×</span> -->
<b> TREx is now part of Biotechnology Resource Center. Please <a class="customHyper" href="https://www.biotech.cornell.edu/core-facilities-brc/facilities/transcriptional-regulation-expression-facility-trex"> click here </a> to visit the BRC affiliated site. </b> <br/>
The TREx Lab is currently OPEN and is taking sample submissions by appointment only. <br />Please review our NEW <a class="customHyper" href="announcements.html"> <b><em>SAMPLE SUBMISSION GUIDELINES</em> </b> </a> for more information or <a class="customHyper" target="_blank" href="https://cores.lifesciences.cornell.edu/userdev/placeorder.php"> <b> <em> Click Here </em></b> </a> to place an order.<br />
To schedule a virtual meeting and or get in touch via e-mail: <a class="customHyper" href="#Virtual"> <b><em>Click Here</em> </b> </a> <br />
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<li><a href="index.html">Home</a></li> <li><a href="home.html">About Us</a></li>
<li><a href="services.html">Service & Pricing </a></li>
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<li><a href="forms.html">Resources </a></li>
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<h1>Transcriptional Regulation & Expression Facility</h1>
<hr>
<h1>About Us : </h1>
<!-- <span class="image main"><img src="images/pic13.jpg" alt="" /></span> -->
<!-- <span class="image main"><img src="images/pic13.jpg" alt="" /></span> -->
<p>The Transcriptional Regulation & Expression (TREx) Facility offers end-to-end genomics profiling services. Our <a href="https://www.biotech.cornell.edu/core-facilities-brc/services/rna-seq-standard-package" target="_blank"> RNAseq </a>, and <a href="https://www.biotech.cornell.edu/core-facilities-brc/services/small-rna-sequencing-standard-package" target="_blank">small-RNA</a> sequencing packages include library preparation, sequencing, and standard data analysis. RNAseq library options include directional (stranded) or standard libraries, with pre-enrichment options including polyA+ selection and rRNA depletion (HMR, plants and/or bacteria). Standard analyses includes preprocessing/QC, mapping, and differential expression analysis. More details are available on the <a href= "services.html"> Services & Pricing </a> page.</p>
<p>We encourage researchers to contact us early about new projects, as we can offer guidance on experimental design and sample quality and input requirements. Information about how to contact us or make a virtual appointment is listed below. We also provide a variety of protocols, guides, and links on the <a href= "forms.html"> Resources </a> page. </p>
<p>Ready to submit samples? <a class="customHyper" target="_blank" href="https://cores.lifesciences.cornell.edu/userdev/placeorder.php"> Click here </a> to launch our new sample submission portal (BRC account required).</p>
<!-- <p>TREx coordinates closely with, but is independent from the Institute of Biotechnologyís Biotechnology Resource Center (BRC). TREx often uses <a href="http://www.biotech.cornell.edu/brc/genomics-facility" target="_blank" > BRC Genomics Facility </a> and <a href="http://www.biotech.cornell.edu/brc/bioinformatics-facility" target="_blank" > Bioinformatics Facility</a> services including Illumina sequencing and high performance computing. For TREx projects that use BRC services, the <a href="https://www.biotech.cornell.edu/acknowledgments" target="_blank"> BRC Terms and Policies apply.</a> </p> -->
<h1>Our Team:</h1>
<p> <span class="image left"><img src="images/jen.png" alt="" /></span><b>Jen Grenier</b> -- Director, TREx Facility & Genomics Innovation Hub <br>
Contact: [email protected] <br />
Office Hours: Tues 1-3pm;
Topics: TREx projects (any scope), genomics technologies
</p>
<br>
<p><span class="image left"><img src="images/chrissy.png" alt="" /></span><b>Christine Butler</b> -- Lab Manager <br>
Contact: [email protected] <br />
</p>
<br />
<br>
<p><span class="image left"><img src="images/ann.png" alt="" /></span><b>Ann Tate</b> -- Project Manager <br>
Contact: [email protected] <br />
Office Hours: Weds 10am-noon; Topics: TREx projects (experimental design, input requirements, current status, future planning), <br / />Illumina sequencing (technology, BRC services, Novogene services)
</p>
<p><span class="image left"><img src="images/faraz2.jpg" alt="" /></span><b>Faraz Ahmed</b> -- Programmer Analyst <br>
Contact: [email protected] <br />
Office Hours: Thurs 1-3pm;
Topics: TREx projects (analysis, data QC, data distribution/access), genomics computational methods/software/pipelines
(RNAseq, small RNA seq, ATACseq, single cell profiling, methyl-seq, and much more)
</p>
<hr>
<h5 id="Virtual">Virtual Appointments</h5>
<p >
To set up an appointment, please use our <a href="https://www.biotech.cornell.edu/core-facilities-brc/facilities/transcriptional-regulation-expression-facility-trex/office-hours", target="_blank">
Bookings Page </a> system to sign up in advance for a 30min window.
During your reserved OH slot, join the appropriate Zoom meeting (See auto-email confirmation for zoom details).
</p>
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