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changing makeblastdb check
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phylophlan/phylophlan.py

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@@ -6,8 +6,8 @@
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'Claudia Mengoni ([email protected]), '
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'Mattia Bolzan ([email protected]), '
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'Nicola Segata ([email protected])')
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__version__ = '3.0.53'
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__date__ = '8 June 2020'
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__version__ = '3.0.54'
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__date__ = '26 August 2020'
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import os
@@ -917,7 +917,7 @@ def init_database_nt(database, databases_folder, params, key_dna, key_aa, verbos
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db_folder = os.path.join(databases_folder, database)
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db_aa = None
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db_dna = None
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makeblastdb_exts = ['.nhr', '.nin', '.nog', '.nsd', '.nsi', '.nsq']
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makeblastdb_exts = ['.nhr', '.nin', '.nsq']
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# assumed to be a fasta file containing the markers
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if os.path.isfile(db_fasta):

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