diff --git a/bamQC/Dockerfile b/bamQC/Dockerfile index 5157c1f..2eb1380 100644 --- a/bamQC/Dockerfile +++ b/bamQC/Dockerfile @@ -15,7 +15,7 @@ RUN wget -qO- https://github.com/GregoryFaust/samblaster/releases/download/v.0.1 && cd /tmp/samblaster-v.0.1.24/ && make && mv samblaster /usr/local/bin && rm -rf /tmp/samblaster-v-0.1.24 WORKDIR /ref -RUN wget -qO- https://downloads.sourceforge.net/project/rseqc/BED/Human_Homo_sapiens/hg38_GENCODE_v23_basic.bed.gz \ +RUN wget -qO- http://courtyard.gi.ucsc.edu/~jvivian/bamqc/hg38_GENCODE_v23.bed.gz \ | gunzip -c > /ref/hg38_GENCODE_v23_basic.bed #WORKDIR /app @@ -30,4 +30,4 @@ ADD . /app RUN mkdir /data WORKDIR /data -ENTRYPOINT ["/bin/bash", "/app/run.sh"] \ No newline at end of file +ENTRYPOINT ["/bin/bash", "/app/run.sh"] diff --git a/bamQC/Makefile b/bamQC/Makefile index 4e08ced..a011154 100644 --- a/bamQC/Makefile +++ b/bamQC/Makefile @@ -7,7 +7,7 @@ build: ${build_tool} ${build_tool}: Dockerfile docker build -t ${name}:${tag} . - docker tag -f ${name}:${tag} ${name}:latest + docker tag ${name}:${tag} ${name}:latest touch ${build_tool} push: build