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speed up by rewriting loops as vectorized functions #1

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acvill opened this issue Jun 25, 2021 · 0 comments
Open

speed up by rewriting loops as vectorized functions #1

acvill opened this issue Jun 25, 2021 · 0 comments
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enhancement New feature or request

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acvill commented Jun 25, 2021

I need to rewrite the for (mch in 1:numfwd) and for (mch in 1:numrev) loops as functions so that I can parallelize match parsing for each motif using apply(). This would break progress reporting using txtProgressBar(), but its functionality can be replaced with pbapply.
@acvill acvill added the enhancement New feature or request label Jun 25, 2021
@acvill acvill self-assigned this Sep 8, 2021
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