Upgrade pip requirements (pyjanitor-devs#1041)

Author: thatlittleboy

.requirements/all.txt

@@ -2,35 +2,36 @@
 # This file is autogenerated by pip-compile with python 3.9
 # To update, run:
 #
-#    pip-compile ./.requirements/base.in
+#    pip-compile .requirements/base.in
 #
 multipledispatch==0.6.0
-    # via -r ./.requirements/base.in
-natsort==7.0.1
-    # via -r ./.requirements/base.in
-numpy==1.19.2
+    # via -r .requirements/base.in
+natsort==8.1.0
+    # via -r .requirements/base.in
+numpy==1.22.3
     # via
     #   pandas
     #   scipy
     #   xarray
-pandas==1.1.3
+packaging==21.3
+    # via xarray
+pandas==1.4.1
     # via
     #   pandas-flavor
     #   xarray
 pandas-flavor==0.2.0
-    # via -r ./.requirements/base.in
-python-dateutil==2.8.1
+    # via -r .requirements/base.in
+pyparsing==3.0.7
+    # via packaging
+python-dateutil==2.8.2
     # via pandas
-pytz==2020.1
+pytz==2021.3
     # via pandas
 scipy==1.8.0
-    # via -r ./.requirements/base.in
-six==1.15.0
+    # via -r .requirements/base.in
+six==1.16.0
     # via
     #   multipledispatch
     #   python-dateutil
-xarray==0.16.1
+xarray==2022.3.0
     # via pandas-flavor
-
-# The following packages are considered to be unsafe in a requirements file:
-# setuptools

.requirements/base.txt

@@ -2,9 +2,9 @@
 # This file is autogenerated by pip-compile with python 3.9
 # To update, run:
 #
-#    pip-compile ./.requirements/biology.in
+#    pip-compile .requirements/biology.in
 #
-biopython==1.78
-    # via -r ./.requirements/biology.in
-numpy==1.19.2
+biopython==1.79
+    # via -r .requirements/biology.in
+numpy==1.22.3
     # via biopython

.requirements/biology.txt

@@ -2,7 +2,7 @@
 # This file is autogenerated by pip-compile with python 3.9
 # To update, run:
 #
-#    pip-compile ./.requirements/chemistry.in
+#    pip-compile .requirements/chemistry.in
 #
-tqdm==4.50.2
-    # via -r ./.requirements/chemistry.in
+tqdm==4.63.0
+    # via -r .requirements/chemistry.in

.requirements/chemistry.txt

@@ -2,66 +2,67 @@
 # This file is autogenerated by pip-compile with python 3.9
 # To update, run:
 #
-#    pip-compile ./.requirements/dev.in
+#    pip-compile .requirements/dev.in
 #
-appdirs==1.4.4
-    # via
-    #   black
-    #   virtualenv
-black==20.8b1
-    # via -r ./.requirements/dev.in
-cfgv==3.2.0
+black==22.1.0
+    # via -r .requirements/dev.in
+cfgv==3.3.1
     # via pre-commit
-click==7.1.2
+click==8.0.4
     # via
     #   black
     #   pip-tools
-darglint==1.5.5
-    # via -r ./.requirements/dev.in
-distlib==0.3.1
+darglint==1.8.1
+    # via -r .requirements/dev.in
+distlib==0.3.4
     # via virtualenv
-filelock==3.0.12
+filelock==3.6.0
     # via virtualenv
-flake8==3.8.4
-    # via -r ./.requirements/dev.in
-identify==1.5.6
+flake8==4.0.1
+    # via -r .requirements/dev.in
+identify==2.4.11
     # via pre-commit
-isort==5.6.4
-    # via -r ./.requirements/dev.in
+isort==5.10.1
+    # via -r .requirements/dev.in
 mccabe==0.6.1
     # via flake8
 mypy-extensions==0.4.3
     # via black
-nodeenv==1.5.0
+nodeenv==1.6.0
     # via pre-commit
-pathspec==0.8.0
+pathspec==0.9.0
     # via black
-pip-tools==5.3.1
-    # via -r ./.requirements/dev.in
-pre-commit==2.7.1
-    # via -r ./.requirements/dev.in
-pycodestyle==2.6.0
+pep517==0.12.0
+    # via pip-tools
+pip-tools==6.5.1
+    # via -r .requirements/dev.in
+platformdirs==2.5.1
+    # via
+    #   black
+    #   virtualenv
+pre-commit==2.17.0
+    # via -r .requirements/dev.in
+pycodestyle==2.8.0
     # via flake8
-pyflakes==2.2.0
+pyflakes==2.4.0
     # via flake8
-pyyaml==5.4
+pyyaml==6.0
     # via pre-commit
-regex==2020.10.15
-    # via black
-six==1.15.0
-    # via
-    #   pip-tools
-    #   virtualenv
-toml==0.10.1
+six==1.16.0
+    # via virtualenv
+toml==0.10.2
+    # via pre-commit
+tomli==2.0.1
     # via
     #   black
-    #   pre-commit
-typed-ast==1.4.1
-    # via black
-typing-extensions==3.7.4.3
+    #   pep517
+typing-extensions==4.1.1
     # via black
-virtualenv==20.0.35
+virtualenv==20.13.3
     # via pre-commit
+wheel==0.37.1
+    # via pip-tools
 
 # The following packages are considered to be unsafe in a requirements file:
 # pip
+# setuptools

.requirements/dev.txt

@@ -1,7 +1,7 @@
-sphinx
-nbsphinx>=0.4.2
-sphinxcontrib-fulltoc==1.2.0
-ipython
+mkdocs
+mkdocs-material
+mkdocstrings<0.18
+ipython>7.31.1
 -r biology.in
 -r chemistry.in
 -r engineering.in