requirements.txt

aiosignal==1.3.1
annotated-types==0.5.0
attrs==23.1.0
beautifulsoup4==4.12.2
bio==1.5.9
biopython==1.81
biothings-client==0.3.0
blis==0.7.11
boltons==21.0.0
catalogue==2.0.10
certifi==2023.7.22
charset-normalizer==3.2.0
click==8.1.7
cloudpathlib==0.15.1
cltk==1.1.6
confection==0.1.3
contourpy==1.1.1
cycler==0.11.0
cymem==2.0.8
emoji==2.8.0
filelock==3.12.4
fonttools==4.42.1
frozenlist==1.4.0
fsspec==2023.9.2
gensim==4.3.2
gitdb==4.0.10
GitPython==3.1.37
gprofiler-official==1.0.0
greek-accentuation==1.2.0
idna==3.4
Jinja2==3.1.2
joblib==1.3.2
jsonschema==4.19.1
jsonschema-specifications==2023.7.1
kiwisolver==1.4.5
langcodes==3.3.0
lxml==4.9.4
MarkupSafe==2.1.3
matplotlib==3.8.0
Metronome==0.1.1
mpmath==1.3.0
msgpack==1.0.6
murmurhash==1.0.10
mygene==3.2.2
networkx==3.1
nltk==3.8.1
numpy==1.26.0
nvidia-cublas-cu12==12.1.3.1
nvidia-cuda-cupti-cu12==12.1.105
nvidia-cuda-nvrtc-cu12==12.1.105
nvidia-cuda-runtime-cu12==12.1.105
nvidia-cudnn-cu12==8.9.2.26
nvidia-cufft-cu12==11.0.2.54
nvidia-curand-cu12==10.3.2.106
nvidia-cusolver-cu12==11.4.5.107
nvidia-cusparse-cu12==12.1.0.106
nvidia-nccl-cu12==2.18.1
nvidia-nvjitlink-cu12==12.2.140
nvidia-nvtx-cu12==12.1.105
packaging==23.1
pandas==2.1.1
pathy==0.10.2
Pillow==10.0.1
platformdirs==3.10.0
pooch==1.7.0
preshed==3.0.9
protobuf==4.24.3
pydantic==2.4.2
pydantic_core==2.10.1
pyparsing==3.1.1
python-dateutil==2.8.2
python-dotenv==1.0.0
python-Levenshtein==0.12.2
pytz==2023.3.post1
PyYAML==6.0.1
ray==2.7.0
referencing==0.30.2
regex==2023.10.3
requests==2.31.0
rpds-py==0.10.3
scikit-learn==1.3.1
scipy==1.11.2
seaborn==0.12.2
six==1.16.0
smart-open==6.4.0
smmap==5.0.1
soupsieve==2.5
spacy==3.7.0
spacy-legacy==3.0.12
spacy-loggers==1.0.5
srsly==2.4.8
stanza==1.6.0
stringcase==1.2.0
sympy==1.12
thinc==8.2.1
threadpoolctl==3.2.0
torch==2.1.0
tqdm==4.66.1
triton==2.1.0
typer==0.9.0
typing_extensions==4.8.0
tzdata==2023.3
urllib3==2.1.0
wasabi==1.1.2
weasel==0.3.2