Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

NPAtlas collection - annotation level #380

Open
CS76 opened this issue Feb 4, 2025 · 0 comments
Open

NPAtlas collection - annotation level #380

CS76 opened this issue Feb 4, 2025 · 0 comments
Assignees

Comments

@CS76
Copy link
Member

CS76 commented Feb 4, 2025

Hi,

First of all, thank you for providing such a wonderful platform with bunch of data!

I’m working with molecules on NPAtlas and I’m very excited to see the coconut has separate collection of molecules that are dedicated to NPAtlas with annotation level.

I have two questions:

  1. Is there any way I can only import molecular information on NPAtlas? The “Download Collection (SDF)” at the NPAtlas page (https://coconut.naturalproducts.net/search?type=tags&q=NPAtlas&tagType=dataSource) is not working at the moment. When I click on the download button, it gives me this error message:

  1. Is there any way I can download the “annotation level” information along with the other molecular information? I’m looking at "coconut_complete-10-2024.csv” and I don’t see any column with this information.

Thank you!

@CS76 CS76 self-assigned this Feb 5, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant