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Merge pull request #81 from SED-ML/l1v5
L1v5
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documents/sed-ml-L1V5.pdf

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index.html

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@@ -141,15 +141,13 @@ <h1 class="page-header"><i class="fa fa-fw fa-home"></i> What is SED-ML?</h1>
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reproducibility of simulation experiments.
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</p>
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<p>
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The current version is <a href="documents/sed-ml-L1V4.pdf" target="_blank"><b>SED-ML Level 1 Version
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4</b></a>.
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For additional specification documents and proposals see the <a href="specifications.html" title="Specifications">Specifications</a>
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page.
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The current version is <a href="documents/sed-ml-L1V5.pdf" target="_blank"><b>SED-ML Level 1 Version 5</b></a>.
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For additional specification documents and proposals see the <a href="specifications.html" title="Specifications">Specifications</a> page.
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</p>
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<a href="documents/sed-ml-L1V4.pdf" target="_blank">
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<a href="documents/sed-ml-L1V5.pdf" target="_blank">
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<span class="btn btn-default" style="font-weight: bold;">
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<img alt="logo" src="images/logoSEDML_w90_t.png"/>
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L1V4 (official specification document)
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L1V5 (official specification document)
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<img alt="pdf" src="images/pdf.png"/>
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showcase.html

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@@ -373,6 +373,7 @@ <h2>SED-ML libraries</h2>
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<li>L1V2</li>
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<li>L1V3</li>
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<li>L1V4</li>
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<li>L1V5</li>
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<td>C++ library for reading and writing SED-ML. Swig languange bindings for C#, Java, Python, R and Ruby.</td>
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<li>L1V2</li>
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<li>L1V3</li>
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<li>L1V4</li>
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<li>L1V5</li>
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<td>Software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs or Gillespie`s stochastic simulation algorithm; arbitrary discrete events can be included in such simulations. COPASI supports impor and export of SED-ML files.</td>

site_creator/templates/db/libraries.yaml

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- L1V2
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- L1V3
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- L1V5
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- name: 'libSedML (old version)'
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link: 'http://libsedml.sf.net'

site_creator/templates/db/tools.yaml

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- L1V2
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- L1V3
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- L1V5
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modelLanguages:
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- SBML
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site_creator/templates/index.html

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@@ -14,15 +14,13 @@ <h1 class="page-header"><i class="fa fa-fw fa-home"></i> What is SED-ML?</h1>
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reproducibility of simulation experiments.
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</p>
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<p>
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The current version is <a href="documents/sed-ml-L1V4.pdf" target="_blank"><b>SED-ML Level 1 Version
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4</b></a>.
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For additional specification documents and proposals see the <a href="specifications.html" title="Specifications">Specifications</a>
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page.
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The current version is <a href="documents/sed-ml-L1V5.pdf" target="_blank"><b>SED-ML Level 1 Version 5</b></a>.
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For additional specification documents and proposals see the <a href="specifications.html" title="Specifications">Specifications</a> page.
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<a href="documents/sed-ml-L1V4.pdf" target="_blank">
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<a href="documents/sed-ml-L1V5.pdf" target="_blank">
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<span class="btn btn-default" style="font-weight: bold;">
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<img alt="logo" src="images/logoSEDML_w90_t.png"/>
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L1V4 (official specification document)
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L1V5 (official specification document)
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site_creator/templates/specifications.html

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<a href="documents/sed-ml-L1V5.pdf" target="_blank">
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L1V4
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L1V5
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<!--
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<a href="https://github.com/SED-ML/sed-ml/raw/master/specification/level-1-version-4/sed-ml-L1V4.pdf" target="_blank">
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<a href="https://github.com/SED-ML/sed-ml/raw/master/specification/level-1-version-4/sed-ml-L1V5.pdf" target="_blank">
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L1V4 draft
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L1V5 draft
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<h2>All specifications</h2>
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<a href="documents/sed-ml-L1V4.pdf" target="_blank">
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<a href="documents/sed-ml-L1V5.pdf" target="_blank">
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L1V4 (official specification document)
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L1V5 (official specification document)
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<a href="documents/sed-ml-L1V4.pdf" target="_blank">
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L1V4 (official specification document)
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<img alt="pdf" src="images/pdf.png" height="35"/>
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<a href="documents/sed-ml-L1V3.pdf" target="_blank">
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L1V3 (official specification document)

specifications.html

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<a href="documents/sed-ml-L1V5.pdf" target="_blank">
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<img alt="logo" src="images/logoSEDML_w90_t.png" height="25"/>
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L1V4
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L1V5
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L1V4 (official specification document)
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L1V5 (official specification document)
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L1V4 (official specification document)
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L1V3 (official specification document)

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