You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hi, I am trying to predict transmembrane protein using tmhmm-2.0c. I have changed the path of perl like as following.
First i check the location of perl
which perl /usr/bin/perl
Then i checked the version also to make sure it is above 5.
perl -v This is perl 5, version 16, subversion 3 (v5.16.3) built for x86_64-linux-thread-multi (with 44 registered patches, see perl -V for more detail)
Copyright 1987-2012, Larry Wall
I have pasted the path (/usr/bin/perl) in the tmhmm and tmhmmformat.pl
Run the cmd:
./tmhmm --short < /mnt/genome3/Lab_Users/Kishor/DISK_3/mnspt1/blood/rsem_outdir/blood.Trinity.RSEM.retained.clustered.fasta.transdecoder.pep > tmhmm.out
But i only recevied a blank folder. It will be great for me if i get any suggestions to solve the problem. Thanks
The text was updated successfully, but these errors were encountered:
Hi, I am trying to predict transmembrane protein using tmhmm-2.0c. I have changed the path of perl like as following.
First i check the location of perl
which perl /usr/bin/perl
Then i checked the version also to make sure it is above 5.
perl -v This is perl 5, version 16, subversion 3 (v5.16.3) built for x86_64-linux-thread-multi (with 44 registered patches, see perl -V for more detail)
Copyright 1987-2012, Larry Wall
I have pasted the path (/usr/bin/perl) in the tmhmm and tmhmmformat.pl
Run the cmd:
./tmhmm --short < /mnt/genome3/Lab_Users/Kishor/DISK_3/mnspt1/blood/rsem_outdir/blood.Trinity.RSEM.retained.clustered.fasta.transdecoder.pep > tmhmm.out
But i only recevied a blank folder. It will be great for me if i get any suggestions to solve the problem. Thanks
The text was updated successfully, but these errors were encountered: