|
| 1 | +# To be filled by the author(s) at the time of submission |
| 2 | +# ------------------------------------------------------- |
| 3 | + |
| 4 | +# Title of the article: |
| 5 | +# - For a successful replication, it shoudl be prefixed with "[Re]" |
| 6 | +# - For a failed replication, it should be prefixed with "[¬Re]" |
| 7 | +# - For other article types, no instruction (but please, not too long) |
| 8 | +title: "[Re] A Neurodynamical Model for Working Memory" |
| 9 | + |
| 10 | +# List of authors with name, orcid number, email and affiliation |
| 11 | +# Affiliation "*" means contact author |
| 12 | +authors: |
| 13 | + - name: Theophile Boraud |
| 14 | + orcid: 0000-0003-0388-0392 |
| 15 | + |
| 16 | + affiliations: 1,4,* # * is for contact author |
| 17 | + |
| 18 | + - name: Anthony Strock |
| 19 | + orcid: 0000-0002-6725-561X |
| 20 | + |
| 21 | + affiliations: 1,2,3 |
| 22 | + |
| 23 | +# List of affiliations with code (corresponding to author affiliations), name |
| 24 | +# and address. You can also use these affiliations to add text such as "Equal |
| 25 | +# contributions" as name (with no address). |
| 26 | +affiliations: |
| 27 | + - code: 1 |
| 28 | + name: INRIA Bordeaux Sud-Ouest |
| 29 | + address: Bordeaux, France |
| 30 | + |
| 31 | + - code: 2 |
| 32 | + name: LaBRI, Université de Bordeaux, Institut Polytechnique de Bordeaux, |
| 33 | + Centre National de la Recherche Scientifique, UMR 5800 |
| 34 | + address: Talence, France |
| 35 | + |
| 36 | + - code: 3 |
| 37 | + name: Institut des Maladies Neurodégénératives, Université de Bordeaux, |
| 38 | + Centre National de la Recherche Scientifique, UMR 5293 |
| 39 | + address: Bordeaux, France |
| 40 | + |
| 41 | + - code: 4 |
| 42 | + name: Department of Computer Science, University of Warwick |
| 43 | + address: Coventry, United Kingdoms |
| 44 | + |
| 45 | + |
| 46 | +# List of keywords (adding the programming language might be a good idea) |
| 47 | +keywords: Recurrent Neural Networks, Echo State Networks, Working Memory |
| 48 | + |
| 49 | +# Code URL and DOI (url is mandatory for replication, doi after acceptance) |
| 50 | +# You can get a DOI for your code from Zenodo, |
| 51 | +# see https://guides.github.com/activities/citable-code/ |
| 52 | +code: |
| 53 | + - url: https://github.com/theoboraud/JaegerESN |
| 54 | + - doi: |
| 55 | + |
| 56 | +# Date URL and DOI (optional if no data) |
| 57 | +data: |
| 58 | + - url: |
| 59 | + - doi: |
| 60 | + |
| 61 | +# Information about the original article that has been replicated |
| 62 | +replication: |
| 63 | + - cite: Pascanu, R., & Jaeger, H. (2011). A neurodynamical model for working memory. Neural networks, 24(2), 199-207. # Full textual citation |
| 64 | + - bib: # Bibtex key (if any) in your bibliography file |
| 65 | + - url: https://www.sciencedirect.com/science/article/abs/pii/S0893608010001899 # URL to the PDF, try to link to a non-paywall version |
| 66 | + - doi: 10.1016/j.neunet.2010.10.003 # Regular digital object identifier |
| 67 | + |
| 68 | +# Don't forget to surround abstract with double quotes |
| 69 | +abstract: "Neurodynamical models of working memory (WM) should provide mechanisms |
| 70 | +for storing, maintaining, retrieving, and deleting information. Raznan Pascanu and |
| 71 | +Herbert Jaeger have suggested that memory states correspond, intuitively in terms of |
| 72 | +nonlinear dynamics, to attractors in an input-driven system, giving a simple WM model |
| 73 | +training all performance modes into a Recurrent Neural Network (RNN) of the Echo State |
| 74 | +Network (ESN) type. |
| 75 | +In this replication, we reproduced this WM model in Python in order to see wether or |
| 76 | +not these observations could be observed on a slightly different model made from scratch." |
| 77 | + |
| 78 | +# Bibliography file (yours) |
| 79 | +bibliography: bibliography.bib |
| 80 | + |
| 81 | +# Type of the article |
| 82 | +# Type can be: |
| 83 | +# * Editorial |
| 84 | +# * Letter |
| 85 | +# * Replication |
| 86 | +type: Replication |
| 87 | + |
| 88 | +# Scientific domain of the article (e.g. Computational Neuroscience) |
| 89 | +# (one domain only & try to be not overly specific) |
| 90 | +domain: Computational Neuroscience |
| 91 | + |
| 92 | +# Coding language (main one only if several) |
| 93 | +language: Python |
| 94 | + |
| 95 | + |
| 96 | +# To be filled by the author(s) after acceptance |
| 97 | +# ----------------------------------------------------------------------------- |
| 98 | + |
| 99 | +# For example, the URL of the GitHub issue where review actually occured |
| 100 | +review: |
| 101 | + - url: https://github.com/ReScience/submissions/issues/8 |
| 102 | + |
| 103 | +contributors: |
| 104 | + - name: Benoît Girard |
| 105 | + orcid: 0000-0002-8117-7064 |
| 106 | + role: editor |
| 107 | + - name: Vahid Rostami |
| 108 | + orcid: 0000-0002-3851-0220 |
| 109 | + role: reviewer |
| 110 | + - name: Christian Jarvers |
| 111 | + orcid: 0000-0003-0062-9776 |
| 112 | + role: reviewer |
| 113 | + |
| 114 | +# This information will be provided by the editor |
| 115 | +dates: |
| 116 | + - received: October 24, 2019 |
| 117 | + - accepted: March 8, 2021 |
| 118 | + - published: April 1, 2021 |
| 119 | + |
| 120 | +# This information will be provided by the editor |
| 121 | +article: |
| 122 | + - number: 1 |
| 123 | + - doi: 10.5281/zenodo.4655870 |
| 124 | + - url: https://zenodo.org/record/4655870/files/article.pdf |
| 125 | + |
| 126 | +# This information will be provided by the editor |
| 127 | +journal: |
| 128 | + - name: "ReScience C" |
| 129 | + - issn: 2430-3658 |
| 130 | + - volume: 7 |
| 131 | + - issue: 1 |
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