Merge branch 'main' of github.com:ROBACON/mobspy

Author: fabriciocravo

docs/example_models/journal_models/Kappa_comp_v1.py

@@ -6,29 +6,27 @@
 Phos_2.not_phos, Phos_2.phos_1, Phos_2.phos_2
 
 # A and B can be linked
-A = Link1*Link2
+A = Link1 * Link2
 B = New(Link1)
 # C can be phosporolized twice
-C = Phos_2*Link2
+C = Phos_2 * Link2
 
 # Rev stands for reversible reaction
-Rev[A.nl_1 + B.nl_1 >> A.l_1 + B.l_1][1e-4, lambda r: 0.1*r]
+Rev[A.nl_1 + B.nl_1 >> A.l_1 + B.l_1][1e-4, lambda r: 0.1 * r]
 
 # A binds to C
-A.nl_2.l_1 + C.nl_2.not_phos >> A.l_2.l_1 + C.l_2.not_phos [1e-4]
+A.nl_2.l_1 + C.nl_2.not_phos >> A.l_2.l_1 + C.l_2.not_phos[1e-4]
 
 # C is phosphoralized releases A
-C.l_2.not_phos + A.l_2.l_1 >> C.nl_2.phos_1 + A.nl_2.l_1 [lambda r: 1*r]
+C.l_2.not_phos + A.l_2.l_1 >> C.nl_2.phos_1 + A.nl_2.l_1[lambda r: 1 * r]
 
 # C phosporalized binds to unbound A
-A.l_2.nl_1 + C.nl_2.phos_1 >> A.l_2.nl_1 + C.l_2.phos_1 [1e-4]
+A.l_2.nl_1 + C.nl_2.phos_1 >> A.l_2.nl_1 + C.l_2.phos_1[1e-4]
 
 # Final C site is modified
-A.l_2.nl_1 + C.l_2.phos_1 >> A.nl_2.nl_1 + C.nl_2.phos_2 [lambda r: r]
+A.l_2.nl_1 + C.l_2.phos_1 >> A.nl_2.nl_1 + C.nl_2.phos_2[lambda r: r]
 
 # initial conditions
 A(1000), B(1000), C(10000)
 S = Simulation(A | B | C)
 print(S.compile())
-
-