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adds a lazy resampling compose tutorial (#1276)
part of Project-MONAI/MONAI#6156 ### Checks <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Avoid including large-size files in the PR. - [x] Clean up long text outputs from code cells in the notebook. - [x] For security purposes, please check the contents and remove any sensitive info such as user names and private key. - [x] Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the `./figure` folder - [x] Notebook runs automatically `./runner.sh -t <path to .ipynb file>` --------- Signed-off-by: Wenqi Li <[email protected]> Signed-off-by: Wenqi Li <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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modules/lazy_resampling_compose.ipynb

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runner.sh

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@@ -63,6 +63,7 @@ doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" ssl_train.ipynb)
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doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" ssl_finetune.ipynb)
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doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" TCIA_PROSTATEx_Prostate_MRI_Anatomy_Model.ipynb)
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doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" lazy_resampling_functional.ipynb)
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doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" lazy_resampling_compose.ipynb)
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doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" TensorRT_inference_acceleration.ipynb)
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# Execution of the notebook in these folders / with the filename cannot be automated
@@ -96,6 +97,7 @@ skip_run_papermill=("${skip_run_papermill[@]}" .*ssl_train*)
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skip_run_papermill=("${skip_run_papermill[@]}" .*ssl_finetune*)
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skip_run_papermill=("${skip_run_papermill[@]}" .*transform_visualization*) # https://github.com/Project-MONAI/tutorials/issues/1155
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skip_run_papermill=("${skip_run_papermill[@]}" .*TensorRT_inference_acceleration*)
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skip_run_papermill=("${skip_run_papermill[@]}" .*mednist_classifier_ray*) # https://github.com/Project-MONAI/tutorials/issues/1307
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# output formatting
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separator=""

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