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Is your feature request related to a problem? Please describe.
We are going to use the WGS-WDL pipeline for LR PacBio sequencing. We will set it up on the recommended backends according to the specified documentation. However, we have a Kubernetes infrastructure that would like to use since it would be more efficient in the long term.
Describe the solution you'd like
Support to run succesfully the WGS-WDL pipeline on a Kubernetes infrastructure.
Describe alternatives you've considered
NA.
Additional context
NA
The text was updated successfully, but these errors were encountered:
Do you have any examples or documentation for running Cromwell on k8s? I have only been able to find this 2 year old README from IBM: https://github.com/IBM/cromwell-on-ibmcloud/blob/main/k8s/README.md. Given that I don't have much direct experience with k8s or a place to test, I think it's unlikely that I'll be able to get to this any time soon. Can you provide examples of what would need to change in the backend configuration?
Is your feature request related to a problem? Please describe.
We are going to use the WGS-WDL pipeline for LR PacBio sequencing. We will set it up on the recommended backends according to the specified documentation. However, we have a Kubernetes infrastructure that would like to use since it would be more efficient in the long term.
Describe the solution you'd like
Support to run succesfully the WGS-WDL pipeline on a Kubernetes infrastructure.
Describe alternatives you've considered
NA.
Additional context
NA
The text was updated successfully, but these errors were encountered: